FC921594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.894e-15 Identity = 42/110 (38.18%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 362 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 G +D ++RK V+K+ST + + VDPD + PG V +N+ + I++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ Sbjct: 73 GTILDRVNERKA---VVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGI 179
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 53/173 (30.64%), Postives = 84/173 (48.55%), Query Frame = 2 Query: 173 RLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 R L+ ++R L+ + +R EL P G ++E+L+ ED A +++ + + ++ + LKPG V +++ + I++ LPSE D V EV E+PT YNDIGGL+KQ+QEL EAI LP+ H E F+K+G+ Sbjct: 26 RQLELQVRTLEADKERLERELSRLRMEMSRLRQP-------PAFAGTLIELLD---EDRA------------------IVQNYNGPRFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVGI 170
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 38/95 (40.00%), Postives = 63/95 (66.32%), Query Frame = 2 Query: 407 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 ++ ++T ++ V+ ++D + LKPG V ++K S ++D LP E DS ++ + DEKP Y DIGGL+ Q QE+ EA+ LP+TH E +Q++G+ Sbjct: 98 IVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGI 192
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15 Identity = 41/110 (37.27%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 362 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 G +D ++RK V+K+ST + + VDP+ + PG V +N+ + I++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ Sbjct: 73 GTILDKVNERKA---VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGI 179
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15 Identity = 41/110 (37.27%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 362 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 G +D ++RK V+K+ST + + VDP+ + PG V +N+ + I++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ Sbjct: 73 GTILDKVNERKA---VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGI 179
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15 Identity = 41/110 (37.27%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 362 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 G +D ++RK V+K+ST + + VDP+ + PG V +N+ + I++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ Sbjct: 73 GTILDRVNERKA---VVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGI 179
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15 Identity = 51/212 (24.06%), Postives = 96/212 (45.28%), Query Frame = 2 Query: 89 MATAMVEDPNLEDD-----------QLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 MATAMV DP + + S DD+ + L ++ ++ + + EL + +P ++G +E+++ N ++ ++T ++ ++ ++ + LKP VG+++ S ++D LP E DS + + EKP YNDIGG + Q QE+ EA+ LP+TH E ++++G+ Sbjct: 1 MATAMVLDPKPAEKLPATRPETSITDVPSDGEDDLYARLKSLQRQLEFIEIQEEYVKDELKNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDQNN---------------------AIVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGI 191
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 50/170 (29.41%), Postives = 84/170 (49.41%), Query Frame = 2 Query: 182 DNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 D +R+L+E+++ EL+ PY+ +++IL DG V++++S+ + + V +D KLKPG LV + + I++ LP D+ VK+ EV EKP Y+DIGGL +QI E+ E I LP+ + E F+++G+ Sbjct: 17 DPIVRLLEEKIESLTKELEKLRQDLNWYKGELEKLLAPPYIEAIVLDILP---------DGK------------VIVRSSSGPNLIVNVSSNIDIKKLKPGSLVALTQRGSTIVEVLPEREDAYVKSFEVIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGI 165
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 34/95 (35.79%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 407 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 ++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + ++ DEKP Y+DIGG++ Q QE+ EA+ LP+TH E ++++G+ Sbjct: 99 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGI 193
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14 Identity = 55/194 (28.35%), Postives = 91/194 (46.91%), Query Frame = 2 Query: 122 EDDQLSSMTADDIV----RASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 ED+ DD V R R L+ ++R+L+ + +R EL P G+++E+L+ +D A +++ + + +D KL+PG V +++ + I++ LP+ D V EV E+P YNDIGGL+KQ+QEL EAI LP+ H E F+++G+ Sbjct: 3 EDEAQFHGNYDDYVTYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQP-------PAFAGSVIEVLD---DDRA------------------IVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGI 168 The following BLAST results are available for this feature:
BLAST of FC921594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921594 ID=FC921594; Name=FC921594; organism=Citrus clementina; type=EST; length=692bpback to top |