FC921594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 1.373e-90 Identity = 169/201 (84.08%), Postives = 178/201 (88.56%), Query Frame = 2 Query: 89 MATAMVEDPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 MAT M ED N EDDQL +M+ +DI+RASRLLDNEIR++KEELQRTNLELDSF LPYLVGNIVEILEMNPE+EAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDY+DIGGLEKQIQELVEAIVLPMTH+ERFQKLGV Sbjct: 1 MATPMAEDSNFEDDQLHAMSTEDIIRASRLLDNEIRIIKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEEEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYHDIGGLEKQIQELVEAIVLPMTHQERFQKLGV 201
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.088e-87 Identity = 166/202 (82.18%), Postives = 177/202 (87.62%), Query Frame = 2 Query: 89 MATAMVEDPN-LEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 MAT MVED + E+DQL+SM+ +DI RA+RLLDNEIR+LKE+ QRTNLE DS+ LPYLVGNIVEILEMNPED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERF+KLGV Sbjct: 1 MATPMVEDTSSFEEDQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGV 202
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.088e-87 Identity = 166/202 (82.18%), Postives = 178/202 (88.12%), Query Frame = 2 Query: 89 MATAMVEDPN-LEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 MAT MVED + E+DQL+SM+ +DIVRA+RLL+NEIR+LKE+ QRTNLE DS+ LPYLVGNIVEILEMNPED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERF+KLGV Sbjct: 1 MATPMVEDTSSFEEDQLASMSTEDIVRATRLLENEIRILKEDAQRTNLECDSYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGV 202
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 320.857 bits (821), Expect = 4.133e-87 Identity = 165/201 (82.09%), Postives = 175/201 (87.06%), Query Frame = 2 Query: 89 MATAMVEDPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 MATAM ED + E DQL+SMT DDI RASRLL NEIR+LKEE QRTNL+L+S LPYLVGNIVEILEM+PED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKE+F+KLG+ Sbjct: 1 MATAMAEDTSFEGDQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKIKENQEKIKLNKQLPYLVGNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGI 201
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 318.931 bits (816), Expect = 1.570e-86 Identity = 163/200 (81.50%), Postives = 177/200 (88.50%), Query Frame = 2 Query: 92 ATAMVEDPNLEDDQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 A AM D + +DDQL+SM+ +DIVRA+RLLDNE RVLK+ELQRTNLE++S+ LPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV+GLVDP+KLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHK+RFQKLG+ Sbjct: 9 AAAMAVD-DADDDQLASMSTEDIVRATRLLDNETRVLKDELQRTNLEVESYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGI 207
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS6A_RAT (26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 5.807e-65 Identity = 120/188 (63.83%), Postives = 152/188 (80.85%), Query Frame = 2 Query: 128 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 +++ M+ ++IV+ +RLLD+EI+++K E+ R EL + LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HKE+F+ LG+ Sbjct: 31 EEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGI 217
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS6A_HUMAN (26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1 SV=3) HSP 1 Score: 246.899 bits (629), Expect = 7.584e-65 Identity = 119/188 (63.30%), Postives = 152/188 (80.85%), Query Frame = 2 Query: 128 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 +++ M+ ++I++ +RLLD+EI+++K E+ R EL + LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HKE+F+ LG+ Sbjct: 31 EEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGI 217
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PR6AA_XENLA (26S protease regulatory subunit 6A-A OS=Xenopus laevis GN=psmc3-A PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 7.584e-65 Identity = 119/188 (63.30%), Postives = 152/188 (80.85%), Query Frame = 2 Query: 128 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 +++ M+ ++I++ +RLLD+EI+++K E+ R EL + LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HKE+F+ LG+ Sbjct: 15 EEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGI 201
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.294e-64 Identity = 119/188 (63.30%), Postives = 152/188 (80.85%), Query Frame = 2 Query: 128 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 +++ M+ ++IV+ +RLLD+EI+++K E+ R EL + LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGDLVGVNKDSYLIL+TLP++YDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HKE+F+ LG+ Sbjct: 34 EEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTDYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGI 220
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PR6AB_XENLA (26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-B PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.689e-64 Identity = 119/183 (65.03%), Postives = 149/183 (81.42%), Query Frame = 2 Query: 143 MTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 M+ ++I++ +RLLD+EI+++K E+ R EL + LPYLV N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPV+GLVD +KLKPGDLVGVNKDSYLIL+TLP+EYDSRVKAMEVDE+PTE Y+DIGGL+KQIQELVEAIVLPM HKE+F+ LG+ Sbjct: 1 MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGI 182 The following BLAST results are available for this feature:
BLAST of FC921594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921594 ID=FC921594; Name=FC921594; organism=Citrus clementina; type=EST; length=692bpback to top |