FC921594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14 Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = 2 Query: 128 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 D + ++ D V+ RLL+ +I+ L+ E++ EL+ + P L+ +V L++ P+ V++++S+ + + V +D +KPG V +N+ IL+ LP + D VK ME+ EKP Y++IGGLE+QI+EL E + LP+ E F+++GV Sbjct: 6 DTIRDASSSDEVQLVRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLS--------PPLIEAVV--LDVLPDGR------------------VLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGV 165
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14 Identity = 50/176 (28.41%), Postives = 84/176 (47.73%), Query Frame = 2 Query: 164 RASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 R R L+ ++R+L+ + +R EL P G ++E+L+ ED A +++ + + +D KL+PG V +++ + +++ LP+ D V EV E+P YNDIGGL+KQ+QEL EAI LP+ H E F+++G+ Sbjct: 24 RRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQP-------PAFAGTVIEVLD---EDRA------------------IVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGI 171
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14 Identity = 41/128 (32.03%), Postives = 70/128 (54.69%), Query Frame = 2 Query: 341 EDEAEEDGANID-----------LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 E++AEED + +D L+ ++ +S ++ ++ VD D+L+PG + ++ ++ L E D V M+V++ P E Y DIGGLE QIQE+ EA+ LP+TH E ++ +G+ Sbjct: 92 EEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGI 219
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14 Identity = 41/128 (32.03%), Postives = 70/128 (54.69%), Query Frame = 2 Query: 341 EDEAEEDGANID-----------LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 E++AEED + +D L+ ++ +S ++ ++ VD D+L+PG + ++ ++ L E D V M+V++ P E Y DIGGLE QIQE+ EA+ LP+TH E ++ +G+ Sbjct: 92 EEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGI 219
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 36/96 (37.50%), Postives = 63/96 (65.62%), Query Frame = 2 Query: 404 VVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 V++++S + + ++ +++KPG +N+ S I++ LP+ YD+++ MEV E P+E Y +IGGLEKQI E+ EA+ LP+ E F+K+G+ Sbjct: 89 VIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPEVFRKMGI 184
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.039e-13 Identity = 52/188 (27.66%), Postives = 95/188 (50.53%), Query Frame = 2 Query: 128 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 D + ++ D V+ RLL+ +I+ L+ E++ EL+ + P L+ +V L++ P+ V++++S+ + + + +D +KPG V +N+ IL+ LP + D VK ME+ E+P Y++IGGLE+QI+EL E + LP+ + E F+++GV Sbjct: 6 DTIRDASSPDEVQLVRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLS--------PPLIEAVV--LDVLPDGR------------------VLVRSSSGPNLVVNIASHIDQKLIKPGISVALNQRGSTILEVLPQKEDPIVKTMEIIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGV 165
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13 Identity = 34/95 (35.79%), Postives = 61/95 (64.21%), Query Frame = 2 Query: 407 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 ++ + T ++ ++ VD + L+PG V ++ + I+ L + D V M++D+ PTE Y+DIGGLE QIQE+ E++ LP+TH E ++++G+ Sbjct: 119 IVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGI 213
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13 Identity = 48/173 (27.75%), Postives = 82/173 (47.40%), Query Frame = 2 Query: 173 RLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 R L+N+ + E+++ ELD P ++G +++++ K +++++S + V +D KL PG V +N+ + I + +PS + V AMEV E DY+ IGGL++QIQEL EA+ LP+T ERF ++G+ Sbjct: 53 RYLENQKIKYEREIRKLQSELDRMKTS--------------PLIIGTVIDVI---------------------KNDRIIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESVEVDYDQIGGLDEQIQELQEAVELPLTSPERFARIGI 190
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS4_ORYSJ (26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica GN=TBP2 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 341 EDEAEEDGANID-----------LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 ED+ EED + +D L+ ++ +S ++ ++ VD D+L+PG + ++ ++ L E D V M+V++ P E Y DIGGL+ QIQE+ EA+ LP+TH E ++ +G+ Sbjct: 97 EDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGI 224
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13 Identity = 37/128 (28.91%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 341 EDEAEEDGANID-----------LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 E+ EE+ A +D L+ + ++ T+ ++ ++ VD ++L+PG V +N ++ ++ L + D V M++++ P E Y D+GGL++QIQE+ EA+ LP+TH E ++++G+ Sbjct: 92 EERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGI 219 The following BLAST results are available for this feature:
BLAST of FC921594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921594 ID=FC921594; Name=FC921594; organism=Citrus clementina; type=EST; length=692bpback to top |