FC921594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13 Identity = 40/132 (30.30%), Postives = 71/132 (53.79%), Query Frame = 2 Query: 296 PYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 P ++G +V++++ N V++++S + V+PD +KPG +N+ S I++ LPS +D++V ME+ + P E Y DIGGL++QI E+ EA+ LP+ E F ++G+ Sbjct: 99 PLIIGTVVDVVDANR---------------------VIVRSSAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEVREAVELPLKRPELFTQIGI 209
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13 Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = 2 Query: 296 PYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 P VGN+ EI++ N ++ ++ ++ ++ VD KL G V +N + ++ + E D V M+V++ PTE Y+DIGGLE Q+QE+ EAI LP+TH E ++++G+ Sbjct: 105 PLTVGNLEEIIDDNH---------------------AIVSSTVGPEHYVRIMSFVDKSKLYLGATVLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGI 215
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13 Identity = 41/133 (30.83%), Postives = 73/133 (54.89%), Query Frame = 2 Query: 329 EMNP-EDEAEEDGANID-----------LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 +M P E++ EE+ + +D L+ ++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G+ Sbjct: 84 QMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGI 216
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13 Identity = 41/133 (30.83%), Postives = 73/133 (54.89%), Query Frame = 2 Query: 329 EMNP-EDEAEEDGANID-----------LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 +M P E++ EE+ + +D L+ ++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G+ Sbjct: 84 QMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGI 216
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13 Identity = 41/133 (30.83%), Postives = 73/133 (54.89%), Query Frame = 2 Query: 329 EMNP-EDEAEEDGANID-----------LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 +M P E++ EE+ + +D L+ ++ TS ++ ++ VD D L+PG V +N + ++ L + D V M+V++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G+ Sbjct: 84 QMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGI 216
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13 Identity = 40/132 (30.30%), Postives = 73/132 (55.30%), Query Frame = 2 Query: 332 MNPEDEA-EEDGANID-----------LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 + P+DE EE+ + +D L+ ++ TS ++ ++ VD D+L+PG V +N + ++ L + D V M++++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G+ Sbjct: 84 LKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGI 215
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13 Identity = 46/132 (34.85%), Postives = 70/132 (53.03%), Query Frame = 2 Query: 296 PYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 P LVG + +ILE DG VV+K+ST + ++ ++LKPG V +N+ + I++ LP+ D V EV+EKP Y DIGGL+ QI+E+ EA+ LP+ E F ++G+ Sbjct: 62 PLLVGVVSDILE---------DGR------------VVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGI 172
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13 Identity = 34/85 (40.00%), Postives = 56/85 (65.88%), Query Frame = 2 Query: 437 FLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 ++ ++ VD D L+PG V ++ + I+ L + D + M++D+ PTE Y DIGGLE QIQE+ EA+ LP+TH E ++++G+ Sbjct: 138 YVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGI 222
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.737e-13 Identity = 40/133 (30.08%), Postives = 73/133 (54.89%), Query Frame = 2 Query: 329 EMNP-EDEAEEDGANID-----------LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 +M P E++ EE+ + +D L+ ++ TS ++ ++ VD D L+PG V +N + ++ L + D V M++++ P E Y DIGGL+ QIQE+ E++ LP+TH E ++++G+ Sbjct: 84 QMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGI 216
BLAST of FC921594 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 8.799e-13 Identity = 47/173 (27.17%), Postives = 81/173 (46.82%), Query Frame = 2 Query: 173 RLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGV 691 R L+N+ + E+++ ELD P ++G +++++ K +++++S + V +D KL PG V +N+ + I + +PS + V AMEV E DY+ IGGL++QIQEL EA+ LP+ ERF ++G+ Sbjct: 53 RYLENQKIKYEREIRKLQSELDRMKTS--------------PLIIGTVIDVI---------------------KNDRIIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESIEVDYDQIGGLDEQIQELQEAVELPLIEPERFARIGI 190 The following BLAST results are available for this feature:
BLAST of FC921594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921594 ID=FC921594; Name=FC921594; organism=Citrus clementina; type=EST; length=692bpback to top |