FC923688

Overview
NameFC923688
Unique NameFC923688
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: P5CS_PONAB (Delta-1-pyrroline-5-carboxylate synthetase OS=Pongo abelii GN=ALDH18A1 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.412e-47
Identity = 101/229 (44.10%), Postives = 144/229 (62.88%), Query Frame = 2
Query:    2 LHKVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIP--ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNSTA 679
            LH +   A+     ++ + LV +REE+              PRGS++LV  I+++ K IPV+GH++GICH+YVD  A++D    +V D+K +YPAACNA+ETLL+H+DL      ++++  L+ E V +  GP+ +  L     E +    EY  +   +E+VD+V+ AIDHIH++GS+HTD IV E+   AE FL  VDSA VF NASTRF DG   GLGAEVG ST+
Sbjct:  516 LHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAKGIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEYPAACNALETLLIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSPSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTENENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTS 744          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: P5CS_MOUSE (Delta-1-pyrroline-5-carboxylate synthetase OS=Mus musculus GN=Aldh18a1 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.412e-47
Identity = 102/229 (44.54%), Postives = 143/229 (62.45%), Query Frame = 2
Query:    2 LHKVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIP--ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNSTA 679
            LH +   A+     ++ I LV +REE+              PRGS++LV  I+++ K IPV+GH++ ICH+YVD  A++D    +V D+K +YPAACNA+ETLL+H+DL      ++++  L+ E V +  GP+ +  L     E +    EY  +   +E+VD V+ AIDHIH++GS+HTD IV E+ K AE FL  VDSA VF NASTRF DG   GLGAEVG ST+
Sbjct:  516 LHLLTQEALSIHGVKEAIQLVNTREEVEDLCRLDKIIDLIIPRGSSQLVRDIQKAAKGIPVMGHSESICHMYVDSEASVDKVTRLVRDSKCEYPAACNALETLLIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSPSEVKSLRTEYGDLEVCIEVVDSVQEAIDHIHKYGSSHTDVIVTENEKTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTS 744          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_TRIEI (Gamma-glutamyl phosphate reductase OS=Trichodesmium erythraeum (strain IMS101) GN=proA PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.146e-47
Identity = 108/223 (48.43%), Postives = 136/223 (60.99%), Query Frame = 2
Query:   17 TSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL---FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            TS  PD V      L+T+REE               PRGSN  V  ++E+T+IPVLGHA+GICHVYVDK A++  A  I IDAK  YPAACNA ETLLVH D+A    L+E+  EL+   V L G     ++L   +      +  EY+ +V +V++VD + +AI HI+ +GS HTD I+ ED K AE FL Q+ SA VFHN STRF DG   G GAEVG ST
Sbjct:  171 TSVNPDGVQ-----LLTTREETLELLKLDEYVDLIIPRGSNSFVKFVQENTQIPVLGHAEGICHVYVDKFADIQKAVKITIDAKTQYPAACNAAETLLVHTDVAAK-FLSEVFPELEKRQVELRGDRATQQILSSVKEATDLDWATEYSDLVLSVKVVDSLDSAIAHINNYGSGHTDAIITEDGKAAEIFLAQIGSAGVFHNCSTRFSDGFRYGFGAEVGIST 387          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_SYNPW (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain WH7803) GN=proA PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.109e-47
Identity = 101/216 (46.76%), Postives = 136/216 (62.96%), Query Frame = 2
Query:   38 VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL---FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            V    + L+T+R+E               PRGSN+LV  I+++T+IPVLGHADGICH+YVD +A+LD A  + +D+K  YPAACNA+ETLLVH+ +A +  L+  +   +  GV +  G  AS  L +PE+     +  EY  +   V++VDD+ AA DHI + GS HT+CIV ED   A+ FL  +DSA V+HN STRF DG   G GAEVG ST
Sbjct:  177 VSPDALALLTTRQESLALLKLDGLVDLIIPRGSNELVRFIQDNTRIPVLGHADGICHLYVDAAADLDKAVRVALDSKTQYPAACNAIETLLVHRSVAAS-FLSAAIPAFRDAGV-VLRGDAASVALGVPESATEADWRTEYLDLTLAVKVVDDLAAAADHIRRFGSRHTECIVTEDAAAADRFLSSIDSAGVYHNCSTRFADGFRYGFGAEVGIST 390          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_MICAN (Gamma-glutamyl phosphate reductase OS=Microcystis aeruginosa (strain NIES-843) GN=proA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.664e-46
Identity = 99/225 (44.00%), Postives = 140/225 (62.22%), Query Frame = 2
Query:   11 VITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPET--RLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            +I  A+  T V    + L+T+REEI              PRGSN+ V  I+ +T+IPVLGHADGICH+Y+DK A+L  A  I +D K  YPAACN +ETLLVH+D+A    L  +   L+ + V L G     +++ +P      +  EY+ ++ +++IVD + +AI+HI+ +GS HT+ IV+E+   A+TF  +VD+A VFHN STRF DG   G GAEVG ST
Sbjct:  164 IIHQALSQTKVNPAAVRLLTTREEIQELLKLDQYIDLIIPRGSNEFVRYIQNNTRIPVLGHADGICHLYIDKEADLSKAIRITVDGKTQYPAACNTIETLLVHQDIA-RQFLPAVAQALEEKKVKLLGDEATRQMINVPSATEEDWQTEYSDLILSIKIVDSLESAIEHINYYGSRHTEGIVSENFNTAKTFSDRVDAAGVFHNCSTRFADGFRYGFGAEVGIST 387          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_THEEB (Gamma-glutamyl phosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=proA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.543e-46
Identity = 100/210 (47.62%), Postives = 131/210 (62.38%), Query Frame = 2
Query:   53 IGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL--LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            I L+T R EI              PRGSN+ V  I+ +T+IPVLGHADG+CH+YVD++A+L+ A  I +DAK  YPAACNA+ETLLVH+D+A    L ++   LQ  GV L G   A  L  + +     +  EY  ++  +++V D+ AA+DHI  +GS HT+ IV ED   A  FL +VD+A VFHN STRF DG   G GAEVG ST
Sbjct:  185 IALLTQRSEISELLQLDQWVDLIIPRGSNEFVRYIQNNTRIPVLGHADGLCHLYVDRAADLEKAIAITLDAKTQYPAACNAIETLLVHRDIA-EAFLPKVAAALQQAGVELRGDAIACDLVPMSLASEADWATEYCDLILAIKVVPDLDAALDHIATYGSGHTEAIVTEDAAAAARFLQEVDAAGVFHNCSTRFADGFRYGFGAEVGIST 393          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_PROMT (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain NATL2A) GN=proA PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.934e-46
Identity = 103/216 (47.69%), Postives = 138/216 (63.89%), Query Frame = 2
Query:   38 VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL---LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            VG   + L+T+R+E               PRGSN+LV  I+E+T+IPVLGHADGICH+YVD S ++D A +I +D+KI YPAACNA+ETLL+H+D+A    L + +     EGV L G  ++  L    K  E+  +  EY  ++ +++IV +V  AI+HI ++ S HT+ IV ED  VAE FL  VDSA V+HN STRF DG   G GAEVG ST
Sbjct:  180 VGSGALSLLTTRQESLGLLRLDKFVNLIIPRGSNELVQFIQENTRIPVLGHADGICHLYVDNSVDIDKAISIALDSKIQYPAACNAIETLLIHEDIA-EMFLKKGLPIFSSEGVTLKGDTKSQALGVKNKADESD-WSKEYLDLILSIKIVRNVNEAIEHIRKYSSRHTEAIVTEDKMVAEKFLSSVDSAGVYHNCSTRFADGFRYGFGAEVGIST 393          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_PROM1 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain NATL1A) GN=proA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.750e-46
Identity = 103/216 (47.69%), Postives = 138/216 (63.89%), Query Frame = 2
Query:   38 VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL---LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            VG   + L+T+R+E               PRGSN+LV  I+E+T+IPVLGHADGICH+YVD S ++D A +I +D+KI YPAACNA+ETLL+H+D+A    L + +     EGV L G  ++  L    K  E+  +  EY  ++ +++IV +V  AI+HI ++ S HT+ IV ED  VAE FL  VDSA V+HN STRF DG   G GAEVG ST
Sbjct:  180 VGSGALSLLTTRQESLGLLRLDKFVNLIIPRGSNELVQFIQENTRIPVLGHADGICHLYVDNSVDIDKAISIALDSKIQYPAACNAIETLLIHEDVA-EMFLKKGLPIFSSEGVTLKGDTKSQALGVKNKADESD-WSKEYLDLILSIKIVRNVNEAIEHIRKYSSRHTEAIVTEDKMVAEKFLSSVDSAGVYHNCSTRFADGFRYGFGAEVGIST 393          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_SYNP2 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=proA PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.012e-45
Identity = 103/228 (45.18%), Postives = 142/228 (62.28%), Query Frame = 2
Query:    2 LHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI-PET-RLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            L ++I +A+ DT V  + + L+T+REEI              PRGSN  V  ++++T IPVLGHADG+CH+YVD +A+L     IV+DAK  YPAACNA+ETLL+H+ +A    L ++   L  + V L G     K++ + P T   +  EY+ +V  ++IV DV AAI HI+ +GS HTD I+ ED   A+ FL +V +A V+HN STRF DG   G GAEVG ST
Sbjct:  158 LTEIIQTALQDTAVSPQAVTLLTTREEIKTLLSLDQYVDLIIPRGSNAFVQYVQQNTTIPVLGHADGVCHLYVDVAADLSKTIPIVVDAKTQYPAACNAVETLLIHEKIAPE-FLPQIAAALTAKQVTLRGDAATQKIMPVQPATAEDWRTEYSDLVLAIKIVPDVEAAIAHINTYGSKHTDGIITEDAATAQIFLNEVKAAGVYHNCSTRFADGFRYGFGAEVGIST 384          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_SYNJA (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain JA-3-3Ab) GN=proA PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.012e-45
Identity = 100/209 (47.85%), Postives = 136/209 (65.07%), Query Frame = 2
Query:   59 LVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK--IPETR-LFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            L+TSR E+              PRGS+  V  I E+T+IPVLGHADG+CH+YVD++A++D+A  + +D+K  YPAACNA+ETLLVH ++A    L   V  L+ +GV L G PR  +L+   IP T   +  EY  ++ ++++V  +  AI HI ++GS HT+ IV ED   A+ FL +VD+A VFHNASTRF DG   GLGAEVG ST
Sbjct:  197 LLTSRAEVKALLQLEGLVDLIIPRGSSSFVRYIMENTRIPVLGHADGLCHLYVDRAADVDMAVRLTLDSKTQYPAACNAIETLLVHAEIAPR-FLPLAVQALREKGVELRGDPRCRQLVPDLIPATEDDWSTEYADLILSIKVVGSLDEAIAHIERYGSRHTEAIVTEDAAAAQRFLDEVDAAGVFHNASTRFADGFRYGLGAEVGIST 404          
The following BLAST results are available for this feature:
BLAST of FC923688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
P5CS_PONAB1.412e-4744.10Delta-1-pyrroline-5-carboxylate synthetase OS=Pong... [more]
P5CS_MOUSE1.412e-4744.54Delta-1-pyrroline-5-carboxylate synthetase OS=Mus ... [more]
PROA_TRIEI3.146e-4748.43Gamma-glutamyl phosphate reductase OS=Trichodesmiu... [more]
PROA_SYNPW4.109e-4746.76Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_MICAN2.664e-4644.00Gamma-glutamyl phosphate reductase OS=Microcystis ... [more]
PROA_THEEB4.543e-4647.62Gamma-glutamyl phosphate reductase OS=Thermosynech... [more]
PROA_PROMT5.934e-4647.69Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROM17.750e-4647.69Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_SYNP21.012e-4545.18Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_SYNJA1.012e-4547.85Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]

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Properties
Property NameValue
Genbank descriptionC31707H06EF StrClemenN Citrus clementina cDNA clone C31707H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923688 ID=FC923688; Name=FC923688; organism=Citrus clementina; type=EST; length=686bp
CTTGCACAAGGTCATCACCTCAGCTATCCCAGATACTGTTGGTGAGAAAC
TTATTGGACTTGTGACTTCCAGGGAAGAGATTCCTGATTTGCTCAAGCTT
GATGATGTGATAGATCTTGTTATCCCCAGAGGCAGCAATAAGCTGGTTTC
TCAAATCAAGGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAA
TTTGTCATGTTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAAC
ATTGTTATTGATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGA
AACTCTTCTGGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGC
TTGTTGTAGAACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGA
GCAAGTAAATTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTA
CAACTCAATGGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTA
TTGACCATATTCATCAACATGGAAGTGCCCATACTGATTGCATTGTTGCA
GAAGATNCAAAAGTTGCTGAAACATTTTTATGTCAAGTTGACAGTGCTGC
AGTATTTCATAATGCAAGTACACGATTCTGTGATGGAAGCACGATTGGAC
TTGGTGCAGAGGTTGGAAATAGCACAGCAGATTCAT
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