FC923688

Overview
NameFC923688
Unique NameFC923688
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_ACAM1 (Gamma-glutamyl phosphate reductase OS=Acaryochloris marina (strain MBIC 11017) GN=proA PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.012e-45
Identity = 102/228 (44.74%), Postives = 138/228 (60.53%), Query Frame = 2
Query:    2 LHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI-PETRL-FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            L K I   + +T V   ++ L+TSREE               PRGSN  V  ++E+T+IPVLGHA+GICH+YVD++A LD A  I +D+KI YPAACNA+ET+LVH D      L +L   LQ   V + G  +   ++ + P T   +  EY  ++ ++++V  +  AI HI+Q+GS HTD I  ED + A  F+ QVD+A VFHN STRF DG   G GAEVG ST
Sbjct:  161 LVKAIHQGLSNTAVSPNVVALLTSREETLELLNLDQDVNLIIPRGSNDFVRFVQENTRIPVLGHAEGICHLYVDQAAKLDQAVEIAVDSKIQYPAACNAVETILVH-DAIAPQYLPKLTAALQDNHVKVLGDAKTQAIVDVGPATETDWATEYGDLIVSIKVVASLSDAIAHINQYGSGHTDAIATEDDQAAAVFMNQVDAAGVFHNCSTRFADGFRYGFGAEVGIST 387          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_ANAVT (Gamma-glutamyl phosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=proA PE=3 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.726e-45
Identity = 101/218 (46.33%), Postives = 133/218 (61.01%), Query Frame = 2
Query:   38 VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL-----FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            V   ++ L+T+REE               PRGSN  V  ++E+T+IPVLGHADGICHVY+DKSA+++ A  + +DAK+ YPAACNA+ETLLVH  +A    L ++   L    V L G  R  ++L  PE        +  EY+  + +++IVD +  AI HI+Q+GS HTD I+ ED    ETF   V+SA VFHN STRF DG   G GAEVG ST
Sbjct:  176 VNPDVVQLLTTREETLELLRLDKYVDLIIPRGSNSFVRFVQENTRIPVLGHADGICHVYIDKSADIEKAIAVSVDAKVQYPAACNAIETLLVHHSIAAE-FLPKVAQALAERQVELKGDERTLQIL--PEIAAATAIDWETEYSDFILSIKIVDSLTEAIAHINQYGSRHTDAIITEDVAAVETFFGLVNSAGVFHNCSTRFADGFRYGFGAEVGIST 390          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_ANASP (Gamma-glutamyl phosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=proA PE=3 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.726e-45
Identity = 100/218 (45.87%), Postives = 135/218 (61.93%), Query Frame = 2
Query:   38 VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL-----FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            V  +++ L+T+REE               PRGSN  V  ++E+T+IPVLGHADGICHVY+DKSA+++ A  + +DAK+ YPAACNA+ETLLVH+ +A    L ++   L    V L G  R  ++L  PE        +  EY+  + +++IVD +  AI HI+Q+GS HTD I+ ED    +TF   V+SA VFHN STRF DG   G GAEVG ST
Sbjct:  176 VNPEVVQLLTTREETLELLRLDKYVDLIIPRGSNSFVRFVQENTRIPVLGHADGICHVYIDKSADIEKAIAVSVDAKVQYPAACNAIETLLVHQSIAAE-FLPKVAQALAEREVELKGDERTLQIL--PEIAAATAIDWETEYSDFILSIKIVDSLTEAIAHINQYGSRHTDAIITEDVAAVKTFFGLVNSAGVFHNCSTRFADGFRYGFGAEVGIST 390          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_NOSP7 (Gamma-glutamyl phosphate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=proA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.023e-45
Identity = 102/223 (45.74%), Postives = 136/223 (60.99%), Query Frame = 2
Query:   17 TSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK--IPETRL-FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            T+  PDTV      L+T+REE               PRGSN  V  ++E+T+IPVLGHADGICH+Y+DK+A++  A  I +DAK  YPA CNA+ETLLVH+ +A    L ++   LQ   V L G  R  K+L   +  T + +  EY+  + +++IVD +  AI HI+++GS HTD I+ ED    ETF   V+SA +FHN STRF DG   G GAEVG ST
Sbjct:  174 TAVNPDTVQ-----LLTTREETLELLKLDKYVDLIIPRGSNSFVRFVQENTRIPVLGHADGICHLYIDKAADISKAVPITVDAKAQYPAVCNAIETLLVHQSIATE-FLPKVADALQERHVELRGDKRTLKILPNIVSATEIDWETEYSDYILSIKIVDSIEDAIAHINEYGSRHTDAIITEDSTSVETFFGLVNSANIFHNCSTRFADGFRYGFGAEVGIST 390          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_SYNJB (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. GN=proA PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.561e-45
Identity = 100/209 (47.85%), Postives = 134/209 (64.11%), Query Frame = 2
Query:   59 LVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK--IPETR-LFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            L+TSR E+              PRGS+  V  I E+T+IPVLGHADG+CH+YVD++A++D+A  + +D+K  YPAACNA+ETLLVHK +A +  L   V  L+ +GV L G P   +L+   IP T   +  EY  ++ ++++V  +  AI HI Q+GS HT+ IV ED   A  FL +VD+A VFHNASTRF DG   G GAEVG ST
Sbjct:  197 LLTSRAEVKALLQLEGLVDLIIPRGSSSFVRYILENTRIPVLGHADGLCHLYVDRAADVDMAIKLTVDSKTQYPAACNAIETLLVHKAIAPH-FLPLAVKALREKGVELRGDPLCRELVPDLIPATEDDWSTEYADLILSIKVVGSLDEAIAHIQQYGSRHTEAIVTEDAAAARRFLDEVDAAGVFHNASTRFADGFRYGFGAEVGIST 404          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_CYAP4 (Gamma-glutamyl phosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=proA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.119e-44
Identity = 99/210 (47.14%), Postives = 133/210 (63.33%), Query Frame = 2
Query:   53 IGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL--FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            I L+TSREE               PRGSN  V  ++E T+IPVLGHA+GICH+YVD++A+L+ A  I IDAK  YPAACNA+ETLLVH+ +A    L +L   LQ   V L G     +++ +       +  EY+ ++ ++++V D+ +AI+HI+ +GS HT+ IV  D   A TFL +VD+A VFHN STRF DG   GLGAEVG ST
Sbjct:  181 IALLTSREETLALLELDQQVDLIIPRGSNAFVRFVQEHTRIPVLGHAEGICHLYVDQTADLEQAVQIAIDAKTQYPAACNAIETLLVHRAIAPQ-FLPQLATALQALKVELRGDELTREIIPVAPAAESDWATEYSDLILSIKVVADLESAINHINTYGSRHTEAIVTADENAATTFLHEVDAAGVFHNCSTRFADGFRYGLGAEVGIST 389          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_PROMP (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=proA PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.462e-44
Identity = 96/213 (45.07%), Postives = 132/213 (61.97%), Query Frame = 2
Query:   44 EKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL--FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            E  I L+TSR++               PRGSN+LV  I+E+T+IPVLGHADGICH+Y+D   NLD+A  + +D+KI YPAACNA+ETLL+HKD A +  LN+ +       V L G  ++ +L    E     +  EY  ++ +++IV+D+  AI HI +  S HTD I+ E+   A  F+ ++DS+ VFHN STRF DG   G GAEVG ST
Sbjct:  182 ENAICLLTSRKDSMAMLNLEKYINLIIPRGSNELVKFIQENTEIPVLGHADGICHLYIDNEVNLDMALKVALDSKIQYPAACNAVETLLIHKDTA-SEFLNKAIPMFNSNDVKLIGDKKSFQLGVAFEANYEDWQTEYLDLILSIKIVNDLEEAIAHIQKFSSKHTDGIITENINNANKFMSEIDSSGVFHNCSTRFADGFRYGFGAEVGIST 393          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_PROM5 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9515) GN=proA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.493e-44
Identity = 96/215 (44.65%), Postives = 129/215 (60.00%), Query Frame = 2
Query:   38 VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL--FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            + +  I L+TSR++               PRGSN+LV  I+E+T IPVLGHADGICH+Y+D   NLD+A  + +D+KI YPAACNA+ETLL+HK +A    L + +       V L G  +A KL    E     +  EY  ++ +++IVDD+   I HI +  S HTD I+ E+   A  F+ ++DSA VFHN STRF DG   G GAEVG ST
Sbjct:  180 IDDNAICLLTSRKDSMAMLNLEKFINLIIPRGSNELVKFIQENTGIPVLGHADGICHLYIDDEVNLDIALKVALDSKIQYPAACNAIETLLIHKSIA-PAFLKKAIPIFNSNNVKLIGDKKAVKLGVAFEANYEDWQTEYLDLILSIKIVDDLEEGIAHIQKFSSKHTDGIITENISNANKFMSEIDSAGVFHNCSTRFADGFRYGFGAEVGIST 393          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_PROM9 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9312) GN=proA PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.256e-44
Identity = 97/210 (46.19%), Postives = 133/210 (63.33%), Query Frame = 2
Query:   53 IGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL--FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            I L+TSR++               PRGSN+LV  I+E+T+IPVLGHADGICH+++D  ANL++A ++ +D+KI YPAACNA+ETLLVHKD+A    L + +       V L G  R  +L    E  +  +  EY  ++ +++IVDD+  AI+HI +  S HTD I+ E+   A+ F+  VDSA VFHN STRF DG   G GAE+G ST
Sbjct:  185 ICLLTSRKDSMSMLNLEKYINLIIPRGSNELVKFIQENTRIPVLGHADGICHLFIDNEANLEMALSVALDSKIQYPAACNAIETLLVHKDIA-QVFLEKAIPLFNSNDVKLIGDKRTVELGVKYEASVEDWQTEYLDLILSIKIVDDLEEAINHIQKFSSKHTDGIITENSTSAKKFMNVVDSAGVFHNCSTRFADGFRYGFGAEIGIST 393          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_PROMS (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain AS9601) GN=proA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.252e-44
Identity = 97/210 (46.19%), Postives = 134/210 (63.81%), Query Frame = 2
Query:   53 IGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL--FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            I L+TSR++               PRGSN+LV  I+E+T+IPVLGHADGICH+++D  ANL++A ++ +D+KI YPAACNA+ETLL+HKD+A    L + +   +   V L G  R+ +L    E  L  +  EY  ++ +++IVDD+  AI HI ++ S HTD I+ E+   A  F+  +DSA VFHN STRF DG   G GAEVG ST
Sbjct:  185 ICLLTSRKDSMAMLNLEKYINLIIPRGSNELVKFIQENTRIPVLGHADGICHLFIDIEANLEMALSVALDSKIQYPAACNAIETLLLHKDIAPT-FLEKAIPLFKSNDVKLIGDMRSVELGVKYEASLEDWKTEYLDLILSIKIVDDLEEAITHIQKYSSKHTDGIITENSHTANKFMNVIDSAGVFHNCSTRFADGFRYGFGAEVGIST 393          
The following BLAST results are available for this feature:
BLAST of FC923688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_ACAM11.012e-4544.74Gamma-glutamyl phosphate reductase OS=Acaryochlori... [more]
PROA_ANAVT1.726e-4546.33Gamma-glutamyl phosphate reductase OS=Anabaena var... [more]
PROA_ANASP1.726e-4545.87Gamma-glutamyl phosphate reductase OS=Anabaena sp.... [more]
PROA_NOSP75.023e-4545.74Gamma-glutamyl phosphate reductase OS=Nostoc punct... [more]
PROA_SYNJB6.561e-4547.85Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_CYAP41.119e-4447.14Gamma-glutamyl phosphate reductase OS=Cyanothece s... [more]
PROA_PROMP1.462e-4445.07Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROM52.493e-4444.65Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROM93.256e-4446.19Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROMS4.252e-4446.19Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]

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Properties
Property NameValue
Genbank descriptionC31707H06EF StrClemenN Citrus clementina cDNA clone C31707H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923688 ID=FC923688; Name=FC923688; organism=Citrus clementina; type=EST; length=686bp
CTTGCACAAGGTCATCACCTCAGCTATCCCAGATACTGTTGGTGAGAAAC
TTATTGGACTTGTGACTTCCAGGGAAGAGATTCCTGATTTGCTCAAGCTT
GATGATGTGATAGATCTTGTTATCCCCAGAGGCAGCAATAAGCTGGTTTC
TCAAATCAAGGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAA
TTTGTCATGTTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAAC
ATTGTTATTGATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGA
AACTCTTCTGGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGC
TTGTTGTAGAACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGA
GCAAGTAAATTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTA
CAACTCAATGGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTA
TTGACCATATTCATCAACATGGAAGTGCCCATACTGATTGCATTGTTGCA
GAAGATNCAAAAGTTGCTGAAACATTTTTATGTCAAGTTGACAGTGCTGC
AGTATTTCATAATGCAAGTACACGATTCTGTGATGGAAGCACGATTGGAC
TTGGTGCAGAGGTTGGAAATAGCACAGCAGATTCAT
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