FC923688

Overview
NameFC923688
Unique NameFC923688
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_PROM0 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9301) GN=proA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.252e-44
Identity = 98/210 (46.67%), Postives = 133/210 (63.33%), Query Frame = 2
Query:   53 IGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL--FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            I L+TSR++               PRGSN+LV  I+E+T+IPVLGHADGICH+++D  ANL++A ++ +D+KI YPAACNA+ETLLVHKD+A    L + +       V L G  ++ +L    E     +  EY  ++ +++IVDD+  AI HI ++ S HTD I+ E+ K A  F+  VDSA VFHN STRF DG   G GAEVG ST
Sbjct:  185 ICLLTSRKDSMAMLNLEKYINLIIPRGSNELVKFIQENTRIPVLGHADGICHLFIDIEANLEMALSVALDSKIQYPAACNAIETLLVHKDIA-PAFLEKAIPLFNSNDVKLIGDRKSVELGLEHEASAEDWQTEYLDLILSIKIVDDLDEAIIHIQKYSSKHTDGIITENLKTANRFMNVVDSAGVFHNCSTRFADGFRYGFGAEVGIST 393          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_NATPD (Gamma-glutamyl phosphate reductase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=proA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.252e-44
Identity = 97/229 (42.36%), Postives = 140/229 (61.14%), Query Frame = 2
Query:    2 LHKVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL----KIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            L+++I  A  D + +    L+ +RE++              PRGS+  VS I+++T IPVLGH +G+CHVYVD +A+LD+A +I  DAK+ YPA CNA+ETLLVH+D+A    L ++        V + G      +L    +      +  EY  ++  +++VD + +AIDHI+ +GS HT+ IV ED   A TF+ ++DSA+VFHNASTRF DG   GLGAEVG ST
Sbjct:  162 LYEIIREATAD-LPDGWAQLIEAREDVDRLLGMDDSVDLLMPRGSSAFVSYIQDNTSIPVLGHTEGVCHVYVDDAADLDMATDIAYDAKVQYPAVCNAVETLLVHEDVA-EEYLPDIAARYAEADVEMRGDEATRSVLDRDIEAATDDDWTSEYGDLIVAIKVVDSLESAIDHINTNGSKHTESIVTEDDGRASTFMRRLDSASVFHNASTRFSDGYRFGLGAEVGIST 388          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_PROM2 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9215) GN=proA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.616e-43
Identity = 97/210 (46.19%), Postives = 133/210 (63.33%), Query Frame = 2
Query:   53 IGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL--FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            I L+TSR++               PRGSN+LV  I+E+T+IPVLGHADGICH+++D  ANL++A ++ +D+KI YPAACNA+ETLLVHKD+A    L + +       V L G  R+ +L    E  L  +  EY  ++ +++IV++V  AI HI ++ S HTD I+ E+   A  F+  VDS+ VFHN STRF DG   G GAEVG ST
Sbjct:  185 ICLLTSRKDSMAMLNLEKYINLIIPRGSNELVKFIQENTRIPVLGHADGICHLFIDIEANLEMALSVALDSKIQYPAACNAIETLLVHKDIA-PAFLEKAIPLFNSNDVKLIGDNRSVELGLKYEASLQDWKTEYLDLILSIKIVNNVEEAITHIQKYSSKHTDGIITENSNTANKFMNVVDSSGVFHNCSTRFADGFRYGFGAEVGIST 393          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_SYNP6 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=proA PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.110e-43
Identity = 100/230 (43.48%), Postives = 133/230 (57.83%), Query Frame = 2
Query:    8 KVITSAIPDTVGEK-----LIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL--LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            + I +AI   + E+      I L+TSREE               PRGSN  V  ++++T IPVLGHADGICH+YVD++A ++    I +DAK  YPAACNA+ETLL+H+ +A    L  +   L  +GV L G   A  +  ++      +  EY+ +V  V +V  + AAI HI+++GS HTD I  ED   A  F  QVDSA V+HN STRF DG   G GAEVG ST
Sbjct:  159 QAIVAAIAQALAEQQAPVEAIRLLTSREETLALLKLDRYVDLIIPRGSNSFVRFVQDNTHIPVLGHADGICHLYVDQAAAIEKTVTITVDAKTQYPAACNAIETLLIHEAIAPQ-FLPVVAAALHEKGVSLRGDAAAQTIVPMEAATEEDWRTEYSDLVLAVRLVPSLDAAIAHINEYGSGHTDAIATEDAAAAAQFFSQVDSAGVYHNCSTRFADGFRYGFGAEVGIST 387          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_SYNE7 (Gamma-glutamyl phosphate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=proA PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.110e-43
Identity = 100/230 (43.48%), Postives = 133/230 (57.83%), Query Frame = 2
Query:    8 KVITSAIPDTVGEK-----LIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL--LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            + I +AI   + E+      I L+TSREE               PRGSN  V  ++++T IPVLGHADGICH+YVD++A ++    I +DAK  YPAACNA+ETLL+H+ +A    L  +   L  +GV L G   A  +  ++      +  EY+ +V  V +V  + AAI HI+++GS HTD I  ED   A  F  QVDSA V+HN STRF DG   G GAEVG ST
Sbjct:  159 QAIVAAIAQALAEQQAPVEAIRLLTSREETLALLKLDRYVDLIIPRGSNSFVRFVQDNTHIPVLGHADGICHLYVDQAAAIEKTVTITVDAKTQYPAACNAIETLLIHEAIAPQ-FLPVVAAALHEKGVSLRGDAAAQTIVPMEAATEEDWRTEYSDLVLAVRLVPSLDAAIAHINEYGSGHTDAIATEDAAAAAQFFSQVDSAGVYHNCSTRFADGFRYGFGAEVGIST 387          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_PROM3 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9303) GN=proA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.756e-43
Identity = 96/216 (44.44%), Postives = 134/216 (62.04%), Query Frame = 2
Query:   38 VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL---FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            +  + I L+T+R+E               PRGSN+LV  I+++T+IPVLGHADGICH+Y+D +A+L  A  I ID+K  YPAACNA+ETLL+H+ +A   +  EL +    +      G  AS+ L + E+     +  EY  ++ +V++V D+  A+DHI ++ S HT+ IV+ D + AE FL  VDSA VFHN STRF DG   G GAEVG ST
Sbjct:  180 IDPEAIALLTTRQESLALLRLDGLVDLIIPRGSNELVRFIQDNTRIPVLGHADGICHLYLDAAADLKQALQIAIDSKTQYPAACNAIETLLIHQSIA--PSFLELAIPAFRQARVRLLGDSASRALGVEESASEEDWATEYLDLILSVKVVPDLEGALDHIRRYSSRHTEAIVSNDQETAERFLQVVDSAGVFHNCSTRFADGFRYGFGAEVGIST 393          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_SYNS9 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain CC9902) GN=proA PE=3 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.787e-42
Identity = 94/215 (43.72%), Postives = 129/215 (60.00%), Query Frame = 2
Query:   38 VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL--LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            V    + L+T+REE               PRGSN+LV  I+++T+IPVLGHADG+CH+YVD +A++  A  + +D+K  YPAACNA+ETLLVH+ +A    L   V   Q  GV L G   +  L   +  +   +  EY  +  +V +VDD+  A +HI ++GS HT+ I+ ED   A+ FL  VDSA V+HN S+RF DG   G GAEVG ST
Sbjct:  179 VSPDALALLTTREESLGLLRLDGLVDLIIPRGSNELVRFIQDNTRIPVLGHADGVCHLYVDAAADVMKATRVAVDSKTQYPAACNAIETLLVHRSIA-TAFLAAAVPAFQAAGVTLRGDAESQSLGVNESAQEEDWSTEYLDLTLSVRVVDDLACATEHIRRYGSRHTEVILTEDLATADRFLAAVDSAGVYHNCSSRFADGFRYGFGAEVGIST 392          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_PROMM (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9313) GN=proA PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.787e-42
Identity = 96/216 (44.44%), Postives = 133/216 (61.57%), Query Frame = 2
Query:   38 VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL---FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            +  + I L+ +R+E               PRGSN+LV  I+++T+IPVLGHADGICH+Y+D +A+L  A  I ID+K  YPAACN++ETLL+H+ +A    L   +      GV L  G  AS+ L + E+     +  EY  ++ +V++V D+  A+DHI ++ S HT+ IV+ D + AE FL  VDSA VFHN STRF DG   G GAEVG ST
Sbjct:  180 IDPEAIALLKTRQESLALLRLDGLVDLIIPRGSNELVRFIQDNTRIPVLGHADGICHLYLDAAADLKQALQIAIDSKTQYPAACNSIETLLIHQSIA-PSFLELAIPAFLQAGVRLL-GDSASRALGVEESASEEDWATEYLDLILSVKVVPDLEGALDHIRRYSSRHTEAIVSNDQETAERFLQAVDSAGVFHNCSTRFADGFRYGFGAEVGIST 393          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_HALWD (Gamma-glutamyl phosphate reductase OS=Haloquadratum walsbyi (strain DSM 16790) GN=proA PE=3 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 3.047e-42
Identity = 94/235 (40.00%), Postives = 139/235 (59.15%), Query Frame = 2
Query:    2 LHKVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL----KIPETRL------FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            L+  I  A P+ V      L+ +RE++              PRGS+  V  ++++T IPVLGH +G+CHVYVD  A+L++A  +  DAK+ YPA CNA+ETLLVH+ +A    L++++ + +  GV + G  R   ++     I E  +      +  EY   + ++ +VD +  AIDHI+ +GS HT+ I+ +D   AE F+  VD+A+VFHNASTRF DG   GLGAEVG ST
Sbjct:  169 LYNCILEATPE-VPSGWAQLIEAREDVQTLLEMDDAVDLIMPRGSSSFVQYVQDNTSIPVLGHTEGVCHVYVDSEADLEMATAVAYDAKVQYPAVCNAVETLLVHESVA-PSFLSQMMKQYRDAGVEIRGDERTQSIVDTESNISEEIIAATEADWTTEYGDRIVSIAVVDSLTDAIDHINMYGSKHTESILTQDDNRAEQFMRAVDAASVFHNASTRFADGFRFGLGAEVGIST 401          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_SYNSC (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain CC9605) GN=proA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.198e-42
Identity = 95/216 (43.98%), Postives = 130/216 (60.19%), Query Frame = 2
Query:   38 VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL---FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            V    + L+T+R+E               PRGSN+LV  I+++T+IPVLGHADG+CH+YVD +A++  A  + +D+K  YPAACNA+ETLLVH+ +A    L   +      GV L  G   S  L + E      +  EY  ++  V++VDD+ AA DHI  +GS HT+ I+ ED + A+ FL  VDSA V+HN S+RF DG   G GAEVG ST
Sbjct:  177 VSADALALLTTRQESLALLRLDGLVDLIIPRGSNELVRFIQDNTRIPVLGHADGVCHLYVDAAADIAKAVRVAVDSKSQYPAACNAIETLLVHRSIA-QPFLAAALPAFAAAGVKL-RGDAESVALGVAEAATEEDWSTEYLDLILAVKLVDDLEAATDHIRSYGSRHTEVILTEDAQTADRFLAAVDSAGVYHNCSSRFADGFRYGFGAEVGIST 390          
The following BLAST results are available for this feature:
BLAST of FC923688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_PROM04.252e-4446.67Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_NATPD4.252e-4442.36Gamma-glutamyl phosphate reductase OS=Natronomonas... [more]
PROA_PROM21.616e-4346.19Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_SYNP62.110e-4343.48Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_SYNE72.110e-4343.48Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_PROM32.756e-4344.44Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_SYNS91.787e-4243.72Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_PROMM1.787e-4244.44Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_HALWD3.047e-4240.00Gamma-glutamyl phosphate reductase OS=Haloquadratu... [more]
PROA_SYNSC5.198e-4243.98Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]

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Properties
Property NameValue
Genbank descriptionC31707H06EF StrClemenN Citrus clementina cDNA clone C31707H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923688 ID=FC923688; Name=FC923688; organism=Citrus clementina; type=EST; length=686bp
CTTGCACAAGGTCATCACCTCAGCTATCCCAGATACTGTTGGTGAGAAAC
TTATTGGACTTGTGACTTCCAGGGAAGAGATTCCTGATTTGCTCAAGCTT
GATGATGTGATAGATCTTGTTATCCCCAGAGGCAGCAATAAGCTGGTTTC
TCAAATCAAGGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAA
TTTGTCATGTTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAAC
ATTGTTATTGATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGA
AACTCTTCTGGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGC
TTGTTGTAGAACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGA
GCAAGTAAATTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTA
CAACTCAATGGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTA
TTGACCATATTCATCAACATGGAAGTGCCCATACTGATTGCATTGTTGCA
GAAGATNCAAAAGTTGCTGAAACATTTTTATGTCAAGTTGACAGTGCTGC
AGTATTTCATAATGCAAGTACACGATTCTGTGATGGAAGCACGATTGGAC
TTGGTGCAGAGGTTGGAAATAGCACAGCAGATTCAT
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