FC923688

Overview
NameFC923688
Unique NameFC923688
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_SYNPX (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain WH8102) GN=proA PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.975e-41
Identity = 98/215 (45.58%), Postives = 125/215 (58.14%), Query Frame = 2
Query:   38 VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGG--PRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            V    + L+T+R+E               PRGSN+LV  I+++T+IPVLGHADGICH+YVD +A++D A  I ID+K  YPAACNA+ETLLVH  +A    L   V   Q  GV L G    R   +        +  EY  M+  V +V  + AA++HI +HGS HT+ I   D + AE FL  VDSA V+ N STRF DG   G GAEVG ST
Sbjct:  177 VAPDALTLLTTRQESLALLRLDGLVDLIIPRGSNELVRFIQDNTRIPVLGHADGICHLYVDAAADVDQAVRIAIDSKTQYPAACNAIETLLVHASIA-PAFLASAVPAFQAAGVTLRGDEHSRQHGISDAATDEDWRTEYLDMILAVRVVPSMDAALEHIRRHGSRHTEAIATTDDQAAERFLGAVDSAGVYLNCSTRFADGFRYGFGAEVGIST 390          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_CLOCE (Gamma-glutamyl phosphate reductase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=proA PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 9.803e-41
Identity = 99/232 (42.67%), Postives = 138/232 (59.48%), Query Frame = 2
Query:    5 HKVITSAIPD-TVGEKL----IGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNSTA 679
            ++V+T  I + TV   L    IGL+ SR+++              PRGSN  V  I ++++IPV+GHADGICHVYVD+SA+L++AK I +D+K  Y A CNA ETLLV + +A    L  L  EL  + V +FG    + ++++     + +  EY   + +++IV  +  AI HI  +GS HTDCIV +D   A  F+  VDS  VF NASTRF DG   G GAEVG ST+
Sbjct:  153 NRVLTGVIEEATVAAGLPKGWIGLLESRDDVNEMLKMDQFIDLIIPRGSNDFVRYIMDNSRIPVMGHADGICHVYVDESADLEMAKKITVDSKTQYVAVCNATETLLVDRAVA-KEFLPGLKAELDKKNVEIFGDEETADIIEVKPASDQDWATEYLDYIISIKIVAGMDEAIKHIITYGSGHTDCIVTKDKAKAVNFMNLVDSGNVFWNASTRFSDGFKYGFGAEVGISTS 383          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_METBU (Gamma-glutamyl phosphate reductase OS=Methanococcoides burtonii (strain DSM 6242) GN=proA PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.280e-40
Identity = 95/235 (40.43%), Postives = 139/235 (59.15%), Query Frame = 2
Query:    2 LHKVITSAIPDTVG--EKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGL-FGGPRASKLLKIPETRL-------FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            +  ++  A+ DT G  +    L+ +REE+              PRGSN  V  I+++TKI VLGHADGICHVYVD +A+L+ A ++  D+K+ YPA CNAMETLL+++++A    L E+V   +  GV L F     +   K+    +       +  EYN  + ++++VD +  AIDHI+++GS HTD I+ E+    + F+  VDS++V  NASTRF DG   G GAEVG ST
Sbjct:  162 IFNILVEALEDTPGIPKGAFQLMETREEVMDILALDEYIDLLIPRGSNDFVKFIQDNTKISVLGHADGICHVYVDTNADLNKAYDVCFDSKVQYPAVCNAMETLLINREIA-EEFLPEMVRRYEEVGVELRFDEGSYAIAEKLGSANIAKATEDDWKTEYNDFILSIKLVDSIEEAIDHINKYGSHHTDAIITENKTKRKQFIALVDSSSVMVNASTRFADGFRYGKGAEVGIST 395          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_PROMA (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus GN=proA PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.672e-40
Identity = 88/186 (47.31%), Postives = 121/186 (65.05%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASK--LLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRGSN+LV  I+++T+IPVLGHADGICH+Y+D + NL+ A +I ID+K  YPAACNA+ETLL+HKD+A +  L   +   +  GV L G   +    ++   E   +  EY  +  +V++V  V  A+ HI ++GS HTD I   + ++A  FL  VDS+ V+HN STRF DG   G GAEVG ST
Sbjct:  209 PRGSNELVRFIQDNTRIPVLGHADGICHLYIDSAVNLNQALDIAIDSKCQYPAACNAIETLLLHKDIAAS-FLKLAIPAFEKLGVTLLGDELSQSFGIITKAEESDWSTEYLDLKLSVKVVSSVDEAMLHIRRYGSRHTDAIATTNKEIARRFLRTVDSSGVYHNCSTRFADGFRYGFGAEVGIST 393          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_SYNS3 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain CC9311) GN=proA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.184e-40
Identity = 97/217 (44.70%), Postives = 126/217 (58.06%), Query Frame = 2
Query:   35 TVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL---FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            +V    + L+T+R E               PRGSN+LV  I+++T+IPVLGHADG+CH+YVD+  +   A  I ID+K  YPAACNA+ETLLVH+ +A    L E V   Q  GV L  G  AS+ L + +      +  EY  +V  V +V D   A++HI  +GS HT+ I   +   AE FL  VDSA V+HN STRF DG   G GAEVG ST
Sbjct:  178 SVSVDALDLLTTRAESLALLRLDGLVDLIIPRGSNELVRFIQDNTRIPVLGHADGVCHLYVDQEVDCTQALRIAIDSKTQYPAACNAIETLLVHEKIA-PIFLKEAVPAFQEAGVCL-RGDEASRDLGVEQVATSDDWSQEYLDLVLAVRVVKDFDEALEHIRMYGSRHTEAIATVNHDTAERFLRAVDSAGVYHNCSTRFADGFRYGFGAEVGIST 392          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_BRAHW (Gamma-glutamyl phosphate reductase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=proA PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.725e-40
Identity = 95/233 (40.77%), Postives = 137/233 (58.80%), Query Frame = 2
Query:    5 HKVITSAIPDTVG------EKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL---KIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            +K I + I +T+       +  + LV +RE+I              PRG N LV  IK +T IPVLGHADGICH+Y+D+SA+ + A  I +D+K  YP+ACNA+ET+LV+K++A +  L +L    +   + +       K+L    I E + +H EY     +++IV D   A +HI+++GS HTD I++E+    E F+  VDSA V+ NASTRF DG   G GAEVG ST
Sbjct:  157 NKAIYNIIEETLNNIKEFPKNSVNLVFTREDIKELLSMDKYIDLIIPRGGNSLVQYIKSNTNIPVLGHADGICHLYIDESADQEKALKICLDSKAQYPSACNAVETILVNKNIA-SEYLPKLYNLFKENEIKMNADAEVKKILTSSDIGEVKEWHFEYGDKEVSLKIVSDTEEAYNHINKYGSHHTDSIISENKDNIEKFMTFVDSANVYCNASTRFSDGFRYGFGAEVGIST 388          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_SYNR3 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain RCC307) GN=proA PE=3 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.416e-39
Identity = 91/215 (42.33%), Postives = 128/215 (59.53%), Query Frame = 2
Query:   50 LIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDL------ACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            ++ L+TSREE               PRGSN LV  I+++T+IPVLGHADGICH+YVD+  +LD A  + +D+K  YPAACNA+ETLL+HK++      A   A  +  VEL+ +G  +  G   S          +  EY  +V ++ +VD +  A++HI ++ S HT+ I   + + AE FL +VDSA V+ N S+RF DG   G GAEVG ST
Sbjct:  191 VLTLLTSREESLALLKLDGLVDLIIPRGSNALVQFIQDNTRIPVLGHADGICHLYVDRQVDLDQAVAVAVDSKAQYPAACNAIETLLLHKEIAPAFLAAALPAFAQAGVELRGDGAAMALGVSQS-----ASDDDWATEYLDLVLSIRVVDSMDEALEHIARYSSRHTEVICTTNTETAERFLARVDSAGVYQNCSSRFADGFRYGFGAEVGIST 400          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_CLOTH (Gamma-glutamyl phosphate reductase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=proA PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.849e-39
Identity = 94/229 (41.05%), Postives = 133/229 (58.08%), Query Frame = 2
Query:    2 LHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI-PETRL-FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNSTA 679
            L ++IT A  +  +    I L+ +R ++              PRGSN+ V  I ++++IPV+GHADGICH Y+D+ A++D+A  IV+D+K  Y A CNA ETLLVHK++A    L EL   L  + V L G     K++ + P T   +  EY     +V++V D+  AI+HI+ +GS HTD I+    + A  F+  VDS  VF N STRF DG   G GAEVG ST+
Sbjct:  156 LAQIITEATEEVGIPPNWIKLLETRADVNEMLKMDKYIDLIIPRGSNEFVRYIMDNSRIPVMGHADGICHCYIDEDADIDMAIRIVVDSKTQYVAVCNATETLLVHKNIAPK-VLPELKRALDSKNVELVGCSETQKIIPVAPATEEDWRTEYLDYKLSVKVVGDLEEAIEHINTYGSGHTDSIITNSKEKAAAFMSLVDSGNVFWNCSTRFSDGFRYGFGAEVGISTS 383          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_SCHPO (Probable gamma-glutamyl phosphate reductase OS=Schizosaccharomyces pombe GN=pro1 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.154e-39
Identity = 90/236 (38.14%), Postives = 137/236 (58.05%), Query Frame = 2
Query:    2 LHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK-IPETRL---------FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            L  V+ SA+  + V +  + LV SREE+              PRGS  LV  IK++TKIPVLGHA G+C +YV + A++++A  +V+D K DYPAACNA+ETLL++ +   +  L ++   L    V L   P + K+LK +P+            ++ E++ ++  ++ V  +++A+ HI+ HGS HTDCI+      A  F+  +D++ V+ NASTRF DG   G G EVG ST
Sbjct:  161 LSNVVRSALGKSKVPQAAVQLVQSREEVSQLLKLDEYIDLVIPRGSTNLVRHIKDNTKIPVLGHAAGLCSMYVHEDADMELASKLVLDGKTDYPAACNAIETLLIN-EAVLSSHLPKIAETLTEAKVTLKCDPASLKVLKDMPKVSALVEPSVDQDYNTEFSDLILAIKTVPSLQSAMQHINTHGSKHTDCIITSSEAAANRFMAGIDASGVYWNASTRFADGFRYGYGTEVGIST 395          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_METBF (Gamma-glutamyl phosphate reductase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=proA PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.768e-38
Identity = 95/235 (40.43%), Postives = 133/235 (56.60%), Query Frame = 2
Query:    2 LHKVITSAIPDTVGEKL--IGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK----IPETRLFHH----EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            + +++  AI  T G       L+ +REEI              PRGSN+ V  I+E+TKI VLGH  GICH+YVD+  +LD A  +  DAK+ YPA CNA+ETLL+++ +A +  L ++       GV L     +  LL+     P +R        EYN ++ ++++VD ++ AIDHI+  GS HTD I+ ED    + F   VDS++V  NASTRF DG   G GAEVG ST
Sbjct:  162 IFQILVKAIESTDGMPAGAFQLMETREEIMDLLSLDAYVDLLIPRGSNEFVKFIQENTKISVLGHTSGICHIYVDEYVDLDTAWKVCFDAKVQYPAVCNAIETLLINRKIA-DTFLPKMAEMYLSAGVELRCDEDSYALLEKRGLSPLSRATEEDWSLEYNDLILSIKLVDTIKEAIDHINTFGSHHTDGIITEDASRRKAFTALVDSSSVMVNASTRFADGYRYGKGAEVGIST 395          
The following BLAST results are available for this feature:
BLAST of FC923688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_SYNPX1.975e-4145.58Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_CLOCE9.803e-4142.67Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_METBU1.280e-4040.43Gamma-glutamyl phosphate reductase OS=Methanococco... [more]
PROA_PROMA1.672e-4047.31Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_SYNS32.184e-4044.70Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_BRAHW3.725e-4040.77Gamma-glutamyl phosphate reductase OS=Brachyspira ... [more]
PROA_SYNR31.416e-3942.33Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_CLOTH1.849e-3941.05Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_SCHPO3.154e-3938.14Probable gamma-glutamyl phosphate reductase OS=Sch... [more]
PROA_METBF7.768e-3840.43Gamma-glutamyl phosphate reductase OS=Methanosarci... [more]

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Properties
Property NameValue
Genbank descriptionC31707H06EF StrClemenN Citrus clementina cDNA clone C31707H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923688 ID=FC923688; Name=FC923688; organism=Citrus clementina; type=EST; length=686bp
CTTGCACAAGGTCATCACCTCAGCTATCCCAGATACTGTTGGTGAGAAAC
TTATTGGACTTGTGACTTCCAGGGAAGAGATTCCTGATTTGCTCAAGCTT
GATGATGTGATAGATCTTGTTATCCCCAGAGGCAGCAATAAGCTGGTTTC
TCAAATCAAGGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAA
TTTGTCATGTTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAAC
ATTGTTATTGATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGA
AACTCTTCTGGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGC
TTGTTGTAGAACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGA
GCAAGTAAATTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTA
CAACTCAATGGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTA
TTGACCATATTCATCAACATGGAAGTGCCCATACTGATTGCATTGTTGCA
GAAGATNCAAAAGTTGCTGAAACATTTTTATGTCAAGTTGACAGTGCTGC
AGTATTTCATAATGCAAGTACACGATTCTGTGATGGAAGCACGATTGGAC
TTGGTGCAGAGGTTGGAAATAGCACAGCAGATTCAT
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