FC923688

Overview
NameFC923688
Unique NameFC923688
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_CHLPB (Gamma-glutamyl phosphate reductase OS=Chlorobium phaeobacteroides (strain BS1) GN=proA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.271e-28
Identity = 71/193 (36.79%), Postives = 111/193 (57.51%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRA---------SKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRGS +L+   ++S+ +PV+    GI H Y D S +L + K IV +AK   P+ CNA++TLL+H++   +  L  +   L  + V +F    A         S+LL+  E + F  E+ S+  +V+ VD +  A+ HI +  S H++ ++A D  V + FL +VD+A V+ N ST F DG+  GLGAE+G ST
Sbjct:  198 PRGSQQLIDFARKSSSVPVIETGAGIVHTYFDLSGDLQMGKEIVFNAKTRRPSVCNALDTLLIHRERLDD--LASIAEPLAEKKVIIFADKDAYPALLSRYPSELLQKAEEKHFGTEFLSLKMSVKTVDSLEDALKHIARFSSMHSEAVIASDAVVKDEFLKRVDAAVVYANTSTAFTDGAQFGLGAEIGIST 388          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_CAUCR (Gamma-glutamyl phosphate reductase OS=Caulobacter crescentus GN=proA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.271e-28
Identity = 71/187 (37.97%), Postives = 105/187 (56.15%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL---LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   LV++++   + PVLGH +G+ HV+V  +A+L  A  +V++AK+   + C + ETLL+ +  A +  L  +   L   G  L G   A  +   +K      +  EY + + +V +VD V  A  HI  +GS HTD I+ ED   AE F+ +VDSA V  NAST+F DG   G GAE+G +T
Sbjct:  199 PRGGKSLVARVQAEARAPVLGHLEGLNHVFVHAAADLKKAVEVVVNAKLRRVSVCGSAETLLIDQ-AAADKLLPPIADALIKAGCELRGDAAARAIEPTMKKATVEDWTTEYLAPILSVAVVDGVAGAARHIASYGSGHTDAIITEDAAAAEAFIAEVDSAIVLVNASTQFADGGEFGFGAEIGIAT 384          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_BORA1 (Gamma-glutamyl phosphate reductase OS=Bordetella avium (strain 197N) GN=proA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.271e-28
Identity = 72/187 (38.50%), Postives = 105/187 (56.15%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL---LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   L++++ +  ++P++ H DG CHVY+D +A+ D A  I  +AK      C +METLLVH+ +A    L  +   L   GV L G  R+  +   +       +  EY   V  V +VDD+  A++HI + GS HTD IV E+   A+ F  +VDS++V+ N  T F DG   GLGAE+G ST
Sbjct:  205 PRGGKGLIARLAQEARVPLIKHLDGNCHVYIDAAADPDRALEIAFNAKTYRYGVCGSMETLLVHRAIAPT-QLPRIARALIEHGVELRGCERSQAIVPGMAAASEEDWGTEYLGPVLAVRVVDDLDQAMEHIARWGSGHTDAIVTENLAAAQRFQREVDSSSVYVNLPTVFADGFEYGLGAEIGIST 390          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_BACAN (Gamma-glutamyl phosphate reductase OS=Bacillus anthracis GN=proA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.271e-28
Identity = 69/187 (36.90%), Postives = 111/187 (59.36%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL---LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG  +L+  +     +PVL    G CHV++D++A+  +A +I I+AK   P+ CNA+ET+++H+  A     +EL   L+  GV L G  +A  +   + +     +  E+ S+   V++V  +  AI HI+ +GS H++ I++E+ +    F   VD+AA++HNASTRF DGS  G GAE+G ST
Sbjct:  201 PRGGKQLIDTVVREASVPVLETGAGNCHVFIDETADKQMAFDI-INAKTQRPSVCNAIETIVLHEKWAEQYG-SELFSSLKKRGVELRGDQKALAMDSTIVLASEEDWGTEFLSLTPAVKLVSSIEEAIHHINTYGSMHSEAIISENEEKVSKFFVSVDAAALYHNASTRFTDGSEFGSGAEIGIST 385          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_BACAC (Gamma-glutamyl phosphate reductase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=proA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.271e-28
Identity = 69/187 (36.90%), Postives = 111/187 (59.36%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL---LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG  +L+  +     +PVL    G CHV++D++A+  +A +I I+AK   P+ CNA+ET+++H+  A     +EL   L+  GV L G  +A  +   + +     +  E+ S+   V++V  +  AI HI+ +GS H++ I++E+ +    F   VD+AA++HNASTRF DGS  G GAE+G ST
Sbjct:  201 PRGGKQLIDTVVREASVPVLETGAGNCHVFIDETADKQMAFDI-INAKTQRPSVCNAIETIVLHEKWAEQYG-SELFSSLKKRGVELRGDQKALAMDSTIVLASEEDWGTEFLSLTPAVKLVSSIEEAIHHINTYGSMHSEAIISENEEKVSKFFVSVDAAALYHNASTRFTDGSEFGSGAEIGIST 385          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_BACAA (Gamma-glutamyl phosphate reductase OS=Bacillus anthracis (strain A0248) GN=proA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.271e-28
Identity = 69/187 (36.90%), Postives = 111/187 (59.36%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL---LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG  +L+  +     +PVL    G CHV++D++A+  +A +I I+AK   P+ CNA+ET+++H+  A     +EL   L+  GV L G  +A  +   + +     +  E+ S+   V++V  +  AI HI+ +GS H++ I++E+ +    F   VD+AA++HNASTRF DGS  G GAE+G ST
Sbjct:  201 PRGGKQLIDTVVREASVPVLETGAGNCHVFIDETADKQMAFDI-INAKTQRPSVCNAIETIVLHEKWAEQYG-SELFSSLKKRGVELRGDQKALAMDSTIVLASEEDWGTEFLSLTPAVKLVSSIEEAIHHINTYGSMHSEAIISENEEKVSKFFVSVDAAALYHNASTRFTDGSEFGSGAEIGIST 385          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_VEREI (Gamma-glutamyl phosphate reductase OS=Verminephrobacter eiseniae (strain EF01-2) GN=proA PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.272e-28
Identity = 75/192 (39.06%), Postives = 111/192 (57.81%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACN-----GALNELV-VELQH--EGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   L+ +I    ++PV+ H DG CH+YVD   ++ +A  +  +AK    + CNA E+LLV + +A       GA+     VE++   E + + G    +KLL   E   +  EY + + +V+++D V AAI HI+++ S HTD I+      A+ FL +VDSA+V  NASTRF DG   GLGAE+G ST
Sbjct:  207 PRGGKGLIERISREARVPVIKHLDGNCHIYVDAPCDIAMAVQVADNAKTHKYSPCNASESLLVARPVAAEFLPKIGAIYATKGVEMRACPEALAILGAVTGAKLLPATEQD-WSEEYLAPIISVKVLDGVDAAIAHINRYSSHHTDAILTMHHAHAQRFLREVDSASVLVNASTRFADGFEYGLGAEIGIST 397          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_MYCSS (Gamma-glutamyl phosphate reductase OS=Mycobacterium sp. (strain MCS) GN=proA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.272e-28
Identity = 71/184 (38.59%), Postives = 103/184 (55.98%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   L+  +    ++P +    G CHVYV  +A+LD+A+ I+++AK   P+ CNA E++L+   +A   A+  L   LQ  GV +   P   +L           E+ SM   + +VD V AAI H++++GS HT+ IV  D   A+ F  +VD+AAV  NAST F DG   G GAE+G ST
Sbjct:  212 PRGGAGLIDAVVRDAQVPTIETGVGNCHVYVHSAADLDMAETILLNAKTRRPSVCNAAESVLIDAAIA-EEAVPRLTKALQDAGVTVHADPTEEEL---------RAEFLSMDIALAVVDGVDAAIAHVNEYGSGHTEAIVTADLAAAQRFTERVDAAAVMVNASTAFTDGEQFGFGAEIGIST 385          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_MYCSK (Gamma-glutamyl phosphate reductase OS=Mycobacterium sp. (strain KMS) GN=proA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.272e-28
Identity = 71/184 (38.59%), Postives = 103/184 (55.98%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   L+  +    ++P +    G CHVYV  +A+LD+A+ I+++AK   P+ CNA E++L+   +A   A+  L   LQ  GV +   P   +L           E+ SM   + +VD V AAI H++++GS HT+ IV  D   A+ F  +VD+AAV  NAST F DG   G GAE+G ST
Sbjct:  212 PRGGAGLIDAVVRDAQVPTIETGVGNCHVYVHSAADLDMAETILLNAKTRRPSVCNAAESVLIDAAIA-EEAVPRLTKALQDAGVTVHADPTEEEL---------RAEFLSMDIALAVVDGVDAAIAHVNEYGSGHTEAIVTADLAAAQRFTERVDAAAVMVNASTAFTDGEQFGFGAEIGIST 385          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_MYCSJ (Gamma-glutamyl phosphate reductase OS=Mycobacterium sp. (strain JLS) GN=proA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.272e-28
Identity = 71/184 (38.59%), Postives = 103/184 (55.98%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   L+  +    ++P +    G CHVYV  +A+LD+A+ I+++AK   P+ CNA E++L+   +A   A+  L   LQ  GV +   P   +L           E+ SM   + +VD V AAI H++++GS HT+ IV  D   A+ F  +VD+AAV  NAST F DG   G GAE+G ST
Sbjct:  212 PRGGAGLIDAVVRDAQVPTIETGVGNCHVYVHSAADLDMAETILLNAKTRRPSVCNAAESVLIDAAIA-EEAVPRLTKALQDAGVTVHADPTEEEL---------RAEFLSMDIALAVVDGVDAAIAHVNEYGSGHTEAIVTADLAAAQRFTERVDAAAVMVNASTAFTDGEQFGFGAEIGIST 385          
The following BLAST results are available for this feature:
BLAST of FC923688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_CHLPB3.271e-2836.79Gamma-glutamyl phosphate reductase OS=Chlorobium p... [more]
PROA_CAUCR3.271e-2837.97Gamma-glutamyl phosphate reductase OS=Caulobacter ... [more]
PROA_BORA13.271e-2838.50Gamma-glutamyl phosphate reductase OS=Bordetella a... [more]
PROA_BACAN3.271e-2836.90Gamma-glutamyl phosphate reductase OS=Bacillus ant... [more]
PROA_BACAC3.271e-2836.90Gamma-glutamyl phosphate reductase OS=Bacillus ant... [more]
PROA_BACAA3.271e-2836.90Gamma-glutamyl phosphate reductase OS=Bacillus ant... [more]
PROA_VEREI4.272e-2839.06Gamma-glutamyl phosphate reductase OS=Verminephrob... [more]
PROA_MYCSS4.272e-2838.59Gamma-glutamyl phosphate reductase OS=Mycobacteriu... [more]
PROA_MYCSK4.272e-2838.59Gamma-glutamyl phosphate reductase OS=Mycobacteriu... [more]
PROA_MYCSJ4.272e-2838.59Gamma-glutamyl phosphate reductase OS=Mycobacteriu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31707H06EF StrClemenN Citrus clementina cDNA clone C31707H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923688 ID=FC923688; Name=FC923688; organism=Citrus clementina; type=EST; length=686bp
CTTGCACAAGGTCATCACCTCAGCTATCCCAGATACTGTTGGTGAGAAAC
TTATTGGACTTGTGACTTCCAGGGAAGAGATTCCTGATTTGCTCAAGCTT
GATGATGTGATAGATCTTGTTATCCCCAGAGGCAGCAATAAGCTGGTTTC
TCAAATCAAGGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAA
TTTGTCATGTTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAAC
ATTGTTATTGATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGA
AACTCTTCTGGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGC
TTGTTGTAGAACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGA
GCAAGTAAATTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTA
CAACTCAATGGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTA
TTGACCATATTCATCAACATGGAAGTGCCCATACTGATTGCATTGTTGCA
GAAGATNCAAAAGTTGCTGAAACATTTTTATGTCAAGTTGACAGTGCTGC
AGTATTTCATAATGCAAGTACACGATTCTGTGATGGAAGCACGATTGGAC
TTGGTGCAGAGGTTGGAAATAGCACAGCAGATTCAT
back to top