FC923688

Overview
NameFC923688
Unique NameFC923688
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_VIBSL (Gamma-glutamyl phosphate reductase OS=Vibrio splendidus (strain LGP32) GN=proA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.287e-28
Identity = 77/190 (40.53%), Postives = 113/190 (59.47%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL------FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   L    KE++ IPV+    GI H++VD+SA+L+ + ++V ++K+  P+ACN+++TLLVH+ +A    L +L   L  + V L    RA  LL   E +       F  E+ S    V++V DV  AIDH+  H ++H+D I+    + +E F+  V SAAV+ NASTRF DG+  GLGAEV  ST
Sbjct:  200 PRGGAGLHKMCKENSTIPVIIGGFGISHIFVDESADLEKSVDVVENSKVQRPSACNSLDTLLVHEAVA-EAFLAKLTQRLAGK-VTLVADARAKSLLAGFEDQRDAVEGDFDTEWLSYTLGVKVVADVAEAIDHMRVHNASHSDAIMTNSLESSERFINSVGSAAVYVNASTRFTDGAQFGLGAEVAVST 387          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_POLNA (Gamma-glutamyl phosphate reductase OS=Polaromonas naphthalenivorans (strain CJ2) GN=proA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.287e-28
Identity = 79/222 (35.59%), Postives = 117/222 (52.70%), Query Frame = 2
Query:   47 KLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK-----------IPETRL-FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            +L+G  T RE +              PRG   L+ +I    K+PV+ H DG CHVYVD   ++ +A  I  +AK    + CNA E LLV + +A +  L ++      +GV +     A+ +L            +P +   ++ EY + V ++++V  V  AI HI+++ S HTD I+  D   A+ FL +VDSA+V  NASTRF DG   GLGAE+G ST
Sbjct:  182 QLVG-TTDREAVGQLIAMPQYVDVIIPRGGKGLIERISRDAKVPVIKHLDGNCHVYVDDPCDIAMAVKIADNAKTQKYSPCNATEGLLVARGVA-DAFLPQIAAIYAAKGVEMRCDEAAAHILHAHPAIESIANIVPASEQDWYEEYLAPVISIKVVSGVEEAIAHINRYSSHHTDAILTRDHMHAQQFLREVDSASVMVNASTRFADGFEFGLGAEIGIST 401          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_HAEIE (Gamma-glutamyl phosphate reductase OS=Haemophilus influenzae (strain PittEE) GN=proA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.287e-28
Identity = 74/192 (38.54%), Postives = 109/192 (56.77%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK--------IPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG + L    K+ + IPV+    G+CH +V++SA+ + A  ++ +AK   P+ CN +ETLLV   +A    L +LV  L  + V       A  +LK        + E  L   E+ S+   V +V+D+ AAI+HI Q+G+ H++ I+     +A  F+ QVD+AAV+ NASTRF DG   GLGAEV  ST
Sbjct:  199 PRGGSDLHELCKQHSTIPVIVGGVGVCHTFVEESADQNKAIFVIDNAKTQRPSTCNTLETLLVQHSIA-EEFLPKLVSHLSAKNVKYHAKSTALNILKQAGANVCEVTEKEL-RKEWGSLDLNVVVVEDIHAAIEHIRQYGTQHSESILTSSQNLARQFINQVDAAAVYVNASTRFTDGGQFGLGAEVAVST 388          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_AERS4 (Gamma-glutamyl phosphate reductase OS=Aeromonas salmonicida (strain A449) GN=proA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.287e-28
Identity = 75/190 (39.47%), Postives = 107/190 (56.32%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL------FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   L    KE++ IPV+    GI HV+VD+SA+   +  ++ +AK+  P+ACNA++TLLVHK +A +  L +LV  +    V L   P A  LL   +         F  E+  +   +++V DV  A+ H+ +H + H+D I+  D   AE F+    SAAV+ NASTRF DG   GLGAEV  ST
Sbjct:  200 PRGGAGLHKMCKENSSIPVIIGGFGISHVFVDESADPVRSLAVIENAKVQRPSACNALDTLLVHKKIAAS-FLPQLVRLMNERQVTLVAAPNAMSLLAGADNLCEAGPEDFDTEWLGLTLGIKLVADVNEALAHMREHNAGHSDAILTNDLANAERFVNGAGSAAVYVNASTRFTDGGQFGLGAEVAVST 388          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_SHEAM (Gamma-glutamyl phosphate reductase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=proA PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.517e-28
Identity = 72/191 (37.70%), Postives = 105/191 (54.97%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL-------KIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   L     E   IPV+    GICH+Y+D+ A++  A N++I+AK+  P  CNA++TLL+H+D      L  L   LQ +GV L    ++   L       +      F  E+ S+   V++V D+  AI HI  + S H++ I+ ++   A  F+ +V+SAAV+ NASTRF DG   G GAEV  ST
Sbjct:  204 PRGGQGLQRLCAEQATIPVILGGIGICHLYLDRDADISRAANVIINAKVQRPTVCNALDTLLIHRDKL--DWLPTLARALQQQGVKLVACEQSLGALAAAGIEAEAASDESFGTEWLSLTLGVKVVADIDEAIAHIRHYSSGHSEAILTDNLAAATHFMNEVNSAAVYLNASTRFTDGGQFGFGAEVAVST 392          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_RHOS4 (Gamma-glutamyl phosphate reductase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=proA PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.517e-28
Identity = 70/190 (36.84%), Postives = 109/190 (57.37%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKD-LACNGALNELVVELQHEGVGLFGGPRASKLLKIPET-----RLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   LV  ++   ++PV  H +GICHVY D  A+L+ A+ +V++AK      C + E LL+ +  LA +G +  L+ +L   GV +       +L ++P T       F  E+  M+   ++VD V  AI HI ++GS+HT+ I+ E+   AE F  ++DSA +  NAST+F DG   G+GAE+G +T
Sbjct:  207 PRGGKGLVGLVQAEARVPVFAHLEGICHVYADGEADLEKARRVVLNAKTRRTGICGSAECLLIDRAFLAKHGPV--LIEDLLKAGVEVRA---EGELAQVPGTVPAQPEDFGREFLDMIIAAKVVDGVDEAIAHIRRYGSSHTESILTENDATAERFFRRLDSAILMRNASTQFADGGEFGMGAEIGIAT 391          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_RHOS1 (Gamma-glutamyl phosphate reductase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=proA PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.517e-28
Identity = 70/190 (36.84%), Postives = 109/190 (57.37%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKD-LACNGALNELVVELQHEGVGLFGGPRASKLLKIPET-----RLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   LV  ++   ++PV  H +GICHVY D  A+L+ A+ +V++AK      C + E LL+ +  LA +G +  L+ +L   GV +       +L ++P T       F  E+  M+   ++VD V  AI HI ++GS+HT+ I+ E+   AE F  ++DSA +  NAST+F DG   G+GAE+G +T
Sbjct:  207 PRGGKGLVGLVQAEARVPVFAHLEGICHVYADGDADLEKARRVVLNAKTRRTGICGSAECLLIDRAFLAKHGPV--LIEDLLKAGVEVRA---EGELAQVPGTVPAQPEDFGREFLDMIIAAKVVDGVDEAIAHIRRYGSSHTESILTENDATAERFFRRLDSAILMRNASTQFADGGEFGMGAEIGIAT 391          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_AZOPC (Gamma-glutamyl phosphate reductase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=proA PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.517e-28
Identity = 67/196 (34.18%), Postives = 112/196 (57.14%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVV---ELQHEGVGLFGGPRASK---------LLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRGS+ L++ ++ +T++PV+    GICH Y DK  + D  + I+ +AK    + CNA++ L++H++      LN+L     +LQ   V ++    + K         L+++     F  E+     ++  V+++R AIDHI ++ S H++CIV+E  K    FL ++D+A V+ N ST F DGS  G+GAE+G ST
Sbjct:  200 PRGSSSLINFVRNNTRVPVIETGAGICHTYFDKKGDKDKGRAIINNAKTRRVSVCNALDCLVLHRE-----RLNDLPYICGDLQKNNVIIYADEPSYKVLVTCYPANLIQLAVEESFGTEFLDYKMSIRTVNNIREAIDHITRYSSKHSECIVSESPKTINFFLQKIDAACVYANVSTAFTDGSQFGMGAEIGIST 390          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_NOCFA (Gamma-glutamyl phosphate reductase OS=Nocardia farcinica GN=proA PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.243e-27
Identity = 70/184 (38.04%), Postives = 108/184 (58.70%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   L++ +     +P +    G CHVYV  +A+LD+A+ I+I+AK   P+ CNA ET+L+ + +A + A+  L   L+  GV + G      L+   +T  +  EY ++   +++VD++ AA++HI+  G+ HT+ IV  D   A  F  +VD+AAV  NAST F DG   G GAE+G ST
Sbjct:  212 PRGGAGLINAVVRDAIVPTIETGTGNCHVYVHAAADLDMAEQILINAKTRRPSVCNAAETVLIDRAVA-DTAVPRLTAALREHGVTIHGD--LPGLVPATDTD-WGEEYLTLDIALKVVDNLDAAVEHINTWGTGHTEAIVTGDLAAAREFTSRVDAAAVMVNASTAFTDGEQFGFGAEIGIST 391          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_CLOPS (Gamma-glutamyl phosphate reductase OS=Clostridium perfringens (strain SM101 / Type A) GN=proA PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.243e-27
Identity = 71/207 (34.30%), Postives = 114/207 (55.07%), Query Frame = 2
Query:   65 TSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL---LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            TSRE                PRG   L+  +  +  +PV+    G CH+Y+D  A++++  +I+++AK   PA CNA E LLV++ +A    L   +  L+ +GV + G  +   +   + +     +  EY   +  V+IV D+  AI HI+++G+ H++ IV ++   +E FL +VD+AAV+ NASTRF DG   G GAE+G ST
Sbjct:  182 TSRETATDFMRLNDYLDVLIPRGGAGLIKAVVNNATVPVIETGVGNCHIYIDDEADINMGVDIIVNAKTSRPAVCNAAEKLLVNEKIA-EEFLPVAIKALKEKGVEIRGCEKTKVIVNDINLATEEDWGKEYLDYILGVKIVKDLDEAISHINKYGTKHSESIVTKNYFNSEKFLQRVDAAAVYVNASTRFTDGGEFGFGAEIGIST 387          
The following BLAST results are available for this feature:
BLAST of FC923688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_VIBSL7.287e-2840.53Gamma-glutamyl phosphate reductase OS=Vibrio splen... [more]
PROA_POLNA7.287e-2835.59Gamma-glutamyl phosphate reductase OS=Polaromonas ... [more]
PROA_HAEIE7.287e-2838.54Gamma-glutamyl phosphate reductase OS=Haemophilus ... [more]
PROA_AERS47.287e-2839.47Gamma-glutamyl phosphate reductase OS=Aeromonas sa... [more]
PROA_SHEAM9.517e-2837.70Gamma-glutamyl phosphate reductase OS=Shewanella a... [more]
PROA_RHOS49.517e-2836.84Gamma-glutamyl phosphate reductase OS=Rhodobacter ... [more]
PROA_RHOS19.517e-2836.84Gamma-glutamyl phosphate reductase OS=Rhodobacter ... [more]
PROA_AZOPC9.517e-2834.18Gamma-glutamyl phosphate reductase OS=Azobacteroid... [more]
PROA_NOCFA1.243e-2738.04Gamma-glutamyl phosphate reductase OS=Nocardia far... [more]
PROA_CLOPS1.243e-2734.30Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]

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Properties
Property NameValue
Genbank descriptionC31707H06EF StrClemenN Citrus clementina cDNA clone C31707H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923688 ID=FC923688; Name=FC923688; organism=Citrus clementina; type=EST; length=686bp
CTTGCACAAGGTCATCACCTCAGCTATCCCAGATACTGTTGGTGAGAAAC
TTATTGGACTTGTGACTTCCAGGGAAGAGATTCCTGATTTGCTCAAGCTT
GATGATGTGATAGATCTTGTTATCCCCAGAGGCAGCAATAAGCTGGTTTC
TCAAATCAAGGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAA
TTTGTCATGTTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAAC
ATTGTTATTGATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGA
AACTCTTCTGGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGC
TTGTTGTAGAACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGA
GCAAGTAAATTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTA
CAACTCAATGGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTA
TTGACCATATTCATCAACATGGAAGTGCCCATACTGATTGCATTGTTGCA
GAAGATNCAAAAGTTGCTGAAACATTTTTATGTCAAGTTGACAGTGCTGC
AGTATTTCATAATGCAAGTACACGATTCTGTGATGGAAGCACGATTGGAC
TTGGTGCAGAGGTTGGAAATAGCACAGCAGATTCAT
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