FC923688

Overview
NameFC923688
Unique NameFC923688
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_RHOPA (Gamma-glutamyl phosphate reductase OS=Rhodopseudomonas palustris GN=proA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.050e-34
Identity = 81/187 (43.32%), Postives = 111/187 (59.36%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL---LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   LV++++   ++PV  H +G+ HVYVD+SA+L++AK+IV++AK+     C A ETLL+ +  A    L  LV  L   G  + G     ++   +K      +  EY   V   ++VD V  AI HIH HGS HTD IVAED + A  FL +VDSA V HNAST+F DG   G GAE+G +T
Sbjct:  216 PRGGKSLVARVESEARVPVFAHLEGVNHVYVDRSADLEMAKSIVLNAKMRRTGVCGAAETLLIDR-AAATTHLAPLVTMLIDSGCEVRGDQTVQQVDPRVKPASDEDWDTEYLDAVIAAKLVDGVDGAIVHIHNHGSHHTDAIVAEDAQAAAKFLGEVDSAIVLHNASTQFADGGEFGFGAEIGIAT 401          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_PSEMY (Gamma-glutamyl phosphate reductase OS=Pseudomonas mendocina (strain ymp) GN=proA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.050e-34
Identity = 85/189 (44.97%), Postives = 112/189 (59.26%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRA-----SKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   L+ +I    K+PV+ H DG+CHVYVD +A+LD A  +  +AK    + CN METLLVH+ +A    L  L    + +GV L G         S +L+  E   F  EYN+ +  + IVD + AAI+HI+ +GS HTD I+ E    A  FL +VDSA+V  NASTRF DG   GLGAE+G ST
Sbjct:  206 PRGGKGLIERISRDAKVPVIKHLDGVCHVYVDIAADLDKAIRVCDNAKTQRYSPCNTMETLLVHQAIA-ERVLPPLAAIYRDKGVELRGDAATRALLGSDVLEASEDDWFA-EYNAPILAIRIVDSLDAAIEHINHYGSHHTDSIITEHFSDARRFLTEVDSASVMVNASTRFADGFEYGLGAEIGIST 392          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_CLOK5 (Gamma-glutamyl phosphate reductase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=proA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.371e-34
Identity = 79/189 (41.80%), Postives = 118/189 (62.43%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL-----FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG + L+  + E++ +PV+    G CHVYVD SA+L +A+NIVI+AK   P  CNAMETLLVH+ +A    +  L   L   GV + G  +  +L  IP+ RL     +  E+  ++  V++V  +  A+DHI+++G+ H++ I+  D   ++ FL +VD+AAV+ NASTRF DG   G GAE+G ST
Sbjct:  204 PRGGSGLIKSVVENSTVPVIETGIGNCHVYVDSSADLTMAENIVINAKTQRPGVCNAMETLLVHEAVA-EKLIPHLTETLSKMGVEIRGCLKTKRL--IPDIRLATAEDYAQEFLDLILAVKVVSSLDEALDHIYKYGTKHSEAIITNDYTSSQRFLREVDAAAVYVNASTRFTDGEEFGFGAEIGIST 389          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_CLOK1 (Gamma-glutamyl phosphate reductase OS=Clostridium kluyveri (strain NBRC 12016) GN=proA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.371e-34
Identity = 79/189 (41.80%), Postives = 118/189 (62.43%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL-----FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG + L+  + E++ +PV+    G CHVYVD SA+L +A+NIVI+AK   P  CNAMETLLVH+ +A    +  L   L   GV + G  +  +L  IP+ RL     +  E+  ++  V++V  +  A+DHI+++G+ H++ I+  D   ++ FL +VD+AAV+ NASTRF DG   G GAE+G ST
Sbjct:  204 PRGGSGLIKSVVENSTVPVIETGIGNCHVYVDSSADLTMAENIVINAKTQRPGVCNAMETLLVHEAVA-EKLIPHLTETLSKMGVEIRGCLKTKRL--IPDIRLATAEDYAQEFLDLILAVKVVSSLDEALDHIYKYGTKHSEAIITNDYTSSQRFLREVDAAAVYVNASTRFTDGEEFGFGAEIGIST 389          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_ARCB4 (Gamma-glutamyl phosphate reductase OS=Arcobacter butzleri (strain RM4018) GN=proA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.371e-34
Identity = 84/206 (40.78%), Postives = 121/206 (58.74%), Query Frame = 2
Query:   65 TSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK-IPET-RLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            +SRE +              PRG   L+  + E++ IPV+ H  GICH+++D+ AN+    +IV++AK   P+ACN++ETLL+H ++A    L+ LV  L   G  L G P   + +  IP T   F  EY + V  ++IV +V  AI HI +HGS H++ I++E+      FL +VD+A V+ NASTRF DG   GLGAEVG ST
Sbjct:  178 SSREGVAKLIKQDKYVDLIVPRGGEALIRFVSENSSIPVIKHDKGICHIFIDQDANITKIFDIVVNAKCQKPSACNSIETLLIHTNIAAL-ILSGLVETLSLHGTILKGCPETLQHINAIPATLEDFDTEYLANVLNIKIVANVDEAITHIQRHGSGHSESILSENYTTINKFLSEVDAACVYANASTRFTDGGEFGLGAEVGIST 382          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_GEOUR (Gamma-glutamyl phosphate reductase OS=Geobacter uraniireducens (strain Rf4) GN=proA PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.339e-34
Identity = 79/191 (41.36%), Postives = 117/191 (61.26%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLA------CNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL-FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   L+  + E +KIPV+ H  G+CHV+VD SA+ D+A+ I++++K   P  CNA+ETLL+HKD+A          L  L VE++ +       P A+     P T   +H EY  ++    +VDD+  AI HI+++GS HT+ I+  D   ++ FL +V+S+ V  NASTRF DG+ +GLGAE+G ST
Sbjct:  204 PRGGESLIRFVVEHSKIPVIKHYKGVCHVFVDASADFDMAERIIVNSKTQRPGVCNALETLLIHKDVAETFIPRIFETLAALKVEMRGDDCFRQFAPGAT-----PATEEDWHAEYLDLILAARVVDDMDEAIAHINKYGSLHTEAIITSDYGNSQRFLREVNSSVVLVNASTRFSDGNQLGLGAEIGIST 389          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_SILPO (Gamma-glutamyl phosphate reductase OS=Silicibacter pomeroyi GN=proA PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.055e-34
Identity = 79/191 (41.36%), Postives = 111/191 (58.12%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACN------GALNELVVELQHEGV-GLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   LV  ++   ++PV  H +GI H+Y+DK+A+ + A  +V++AK      C A E LL+HKD+A N       AL E  VE++ EG+ G      A           +  EY  M+   ++VDDV AAI HI Q+GS HTDC++ ED  VA  F  ++DSA + HNAST+F DG   G+GAE+G +T
Sbjct:  208 PRGGKGLVGLVQREARVPVFAHLEGIVHIYIDKAADPEKALRVVMNAKTRRTGICGAAECLLIHKDIADNLGADLVRALIEAGVEVRAEGLPGSLAATEAD----------WGKEYLDMIIAAKVVDDVDAAIAHIRQYGSNHTDCVITEDDAVAARFFERLDSAILMHNASTQFADGGEFGMGAEIGIAT 388          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_BRASO (Gamma-glutamyl phosphate reductase OS=Bradyrhizobium sp. (strain ORS278) GN=proA PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.055e-34
Identity = 82/187 (43.85%), Postives = 111/187 (59.36%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGP--RASKLLKIPETRL-FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   LV++++   ++PV  H +G+ HVYVD +A+LD+AK+IV++AK+     C A ETLL+  D A    +  LV  L   G  + G    RA+     P     +  EY   +   ++VD V  AI HIH HGS HTD IV +D KVA+ FL +VDSA V HNAST+F DG   G GAE+G +T
Sbjct:  216 PRGGKSLVARVEAEARVPVFAHLEGVNHVYVDGAADLDMAKSIVLNAKMRRTGVCGAAETLLI--DRASQDKIKPLVDMLIGAGCEVRGDEAVRAADARVTPANNEDWDTEYLDAIIAAKVVDGVDGAIAHIHAHGSHHTDAIVTQDNKVADKFLNEVDSAIVLHNASTQFADGGEFGFGAEIGIAT 400          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_THET8 (Gamma-glutamyl phosphate reductase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=proA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.989e-34
Identity = 80/188 (42.55%), Postives = 116/188 (61.70%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK--IPETR-LFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNSTA 679
            PRG  +L+  ++   ++PVL HA G+ H+YVDK A+L +A  + ++ K   PA CNA+ET+LVH+ +A    L  L   ++ +GV L   PRA  LLK  +P     +  EY  +V  V++V  +  A+ HI ++GS HT+ I  ED K A  FL +VD++ V  NASTRF DG  +GLGAE+G ST+
Sbjct:  199 PRGGEELIRLVQREARVPVLAHAKGVNHLYVDKKADLSMALRLALNGKTQRPAVCNALETVLVHEKVA-EAFLPRLEKAMREKGVELRACPRALPLLKEAVPAREDEWDREYLDLVLRVKVVSGLEEALAHIARYGSRHTEAICTEDPKAAWRFLEEVDASLVLWNASTRFNDGFELGLGAEIGISTS 385          
BLAST of FC923688 vs. ExPASy Swiss-Prot
Match: PROA_PELPD (Gamma-glutamyl phosphate reductase OS=Pelobacter propionicus (strain DSM 2379) GN=proA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.989e-34
Identity = 76/190 (40.00%), Postives = 118/190 (62.11%), Query Frame = 2
Query:  125 PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACN------GALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDXKVAETFLCQVDSAAVFHNASTRFCDGSTIGLGAEVGNST 676
            PRG   L+  + E+++IPV+ H  G+CH++VD+SA+ D+A+ I+I+AK   P  CNA+ETLL+H+ +A          L  + VEL+ +       P+A    K      ++ EY  ++    +VDD+  AIDHI+++GS HT+ I+  D   A+ F+ +V+S+ V  NASTRF DG+ +GLGAE+G ST
Sbjct:  204 PRGGEGLIRFVTENSRIPVIKHYKGVCHIFVDESADFDMAERIIINAKTQRPGVCNALETLLIHESVAAAFIPRIASILGGMQVELRGDERFRALAPQA----KPASEEDWYAEYLELILACRVVDDLDQAIDHINRYGSLHTESIITSDYGRAQRFIREVNSSCVVVNASTRFADGNQLGLGAEIGIST 389          
The following BLAST results are available for this feature:
BLAST of FC923688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_RHOPA1.050e-3443.32Gamma-glutamyl phosphate reductase OS=Rhodopseudom... [more]
PROA_PSEMY1.050e-3444.97Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]
PROA_CLOK51.371e-3441.80Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_CLOK11.371e-3441.80Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_ARCB41.371e-3440.78Gamma-glutamyl phosphate reductase OS=Arcobacter b... [more]
PROA_GEOUR2.339e-3441.36Gamma-glutamyl phosphate reductase OS=Geobacter ur... [more]
PROA_SILPO3.055e-3441.36Gamma-glutamyl phosphate reductase OS=Silicibacter... [more]
PROA_BRASO3.055e-3443.85Gamma-glutamyl phosphate reductase OS=Bradyrhizobi... [more]
PROA_THET83.989e-3442.55Gamma-glutamyl phosphate reductase OS=Thermus ther... [more]
PROA_PELPD3.989e-3440.00Gamma-glutamyl phosphate reductase OS=Pelobacter p... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31707H06EF StrClemenN Citrus clementina cDNA clone C31707H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923688 ID=FC923688; Name=FC923688; organism=Citrus clementina; type=EST; length=686bp
CTTGCACAAGGTCATCACCTCAGCTATCCCAGATACTGTTGGTGAGAAAC
TTATTGGACTTGTGACTTCCAGGGAAGAGATTCCTGATTTGCTCAAGCTT
GATGATGTGATAGATCTTGTTATCCCCAGAGGCAGCAATAAGCTGGTTTC
TCAAATCAAGGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAA
TTTGTCATGTTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAAC
ATTGTTATTGATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGA
AACTCTTCTGGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGC
TTGTTGTAGAACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGA
GCAAGTAAATTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTA
CAACTCAATGGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTA
TTGACCATATTCATCAACATGGAAGTGCCCATACTGATTGCATTGTTGCA
GAAGATNCAAAAGTTGCTGAAACATTTTTATGTCAAGTTGACAGTGCTGC
AGTATTTCATAATGCAAGTACACGATTCTGTGATGGAAGCACGATTGGAC
TTGGTGCAGAGGTTGGAAATAGCACAGCAGATTCAT
back to top