FC925066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925066 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.930e-31 Identity = 88/225 (39.11%), Postives = 104/225 (46.22%), Query Frame = 3 Query: 126 MCGGSILGDFFPRHGGSRVTASDLWPN----------------------SPFAATKQLPHNFESTPFSDEHQS---LAKIKR---PQPPSYLNSCSASGD-------------EKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPNEEDVFTVTPXXXXXXXXXXXXXXNPTPSPLPSLSQEDLFSRNN 677 MCGG+I+ DF P RVT+ +WP+ + F A Q + S D+ A +K P S +A G EK R+RKN YRGIRQRPWGKWAAEIRDPR+G R+WLGTF TAEEAARAYD AR+IRG KAKVNFP E P P+P P+L Q S N Sbjct: 1 MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEEN--MKANSQKRSVKANLQKPVAKPNPNPSPALVQNSNISFEN 223
BLAST of FC925066 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.011e-30 Identity = 71/147 (48.30%), Postives = 93/147 (63.27%), Query Frame = 3 Query: 126 MCGGSILGDFFP---RHGGSRVTASDLWPNSPFAATKQLPHNFESTPFSDEHQSLAK---IKRPQPPSYLNSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPN 548 MCGG+I+ D+ P + G ++TA +LW +A + ++ +Q K +K+ Q E +R+RKN+YRGIR+RPWGKWAAEIRDPRKGVRVWLGTFNTAEEAA AYD A++IRG KAK+NFP+ Sbjct: 1 MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPTNQVNVKEEAVKKEQ-----------ATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPD 136
BLAST of FC925066 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.011e-30 Identity = 83/193 (43.01%), Postives = 104/193 (53.89%), Query Frame = 3 Query: 126 MCGGSILGDFFPRHGGSRVTASDLWP---NSPFAATKQ---------LPHNFEST----------PFSDEHQSLAKIK--------RPQPPSYLNSC--------------SASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPNEEDVFTVT 572 MCGG+I+ DF P RVT +WP N A+ K+ L +FE+ D+ +K +P +++++ SA EK KR+RKN YRGIRQRPWGKWAAEIRDPRKG R WLGTF+TAEEAARAYD AR+IRG KAKVNFP E++ V+ Sbjct: 1 MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFKDDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEEKNPSVVS 193
BLAST of FC925066 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.907e-29 Identity = 73/143 (51.05%), Postives = 88/143 (61.54%), Query Frame = 3 Query: 126 MCGGSILGDFFPRHGGSRVTASDLWPNSPFAATKQLPHNFESTPFSDEHQSLAKIKRPQPPSYLNSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPNEE 554 MCGG+I+ DF +W S ES P + S++ K+ +P S +E+ KR+RKNLYRGIRQRPWGKWAAEIRDP KGVRVWLGTF TA+EAARAYD A KIRG+KAK+NFPN + Sbjct: 1 MCGGAIISDF-------------IWSKS------------ESEP--SQLGSVSSRKKRKPVSV-------SEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPNTQ 109
BLAST of FC925066 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29 Identity = 64/92 (69.57%), Postives = 73/92 (79.35%), Query Frame = 3 Query: 282 AKIKRPQPPSYLNSCSASGDE----KKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFP 545 A KR L++ + +G + K KR+RKN +RGIRQRPWGKWAAEIRDPRKGVRVWLGTFN+AEEAARAYD EAR+IRGKKAKVNFP Sbjct: 85 AAFKRALSRDNLSTITTAGFDGPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFP 176
BLAST of FC925066 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.671e-25 Identity = 52/72 (72.22%), Postives = 62/72 (86.11%), Query Frame = 3 Query: 336 GDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPNE 551 G K+++ + Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNTAEEAARAYD EA++IRG KAK+NFPNE Sbjct: 12 GSASDGKKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNE 83
BLAST of FC925066 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.943e-23 Identity = 53/101 (52.48%), Postives = 63/101 (62.38%), Query Frame = 3 Query: 339 DEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPNEEDVFTVTPXXXXXXXXXXXXXXNPTPSPLP 641 D+ +P+R+ YRG+RQRPWGKWAAEIRDP+K RVWLGTF TAEEAA AYD+ A K +G KAK+NFP T T +P P P P Sbjct: 30 DQDQPRRRH---YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTTTTISHAPRGVSESMNSPPPRPGP 127
BLAST of FC925066 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.014e-22 Identity = 52/95 (54.74%), Postives = 66/95 (69.47%), Query Frame = 3 Query: 261 SDEHQSLAKIKRPQPPSYLNSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFP 545 SD ++++ PS ++ S+S ++ R+ YRG+RQRPWGKWAAEIRDP K RVWLGTF+TAEEAA AYDK A + RG KAK+NFP Sbjct: 32 SDVSDFVSELTGQPIPSSIDDQSSSLTLQEKSNSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFP 126
BLAST of FC925066 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.324e-22 Identity = 54/100 (54.00%), Postives = 68/100 (68.00%), Query Frame = 3 Query: 276 SLAKIKRPQPPSYLNSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPNEEDVFTVTP 575 S A++ P + A +E + K++R YRG+RQRPWGKWAAEIRDP + RVWLGTF+TAE AARAYD+ A + RG KAK+NFP EDV + P Sbjct: 47 SFARVDSSHNPIEESMSKAFPEEAREKKRR---YRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP--EDVRILPP 141
BLAST of FC925066 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 5.031e-22 Identity = 52/95 (54.74%), Postives = 61/95 (64.21%), Query Frame = 3 Query: 297 PQP----PSYLNSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPNEEDVFTV 569 PQP + C +S ++PK+ YRG+RQRPWGKWAAEIRDP K RVWLGTF TAE AARAYD A + RG KAK+NFP T+ Sbjct: 36 PQPLITGSAVTKECESSMSLERPKK-----YRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPENVGTQTI 125 The following BLAST results are available for this feature:
BLAST of FC925066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 134
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925066 ID=FC925066; Name=FC925066; organism=Citrus clementina; type=EST; length=726bpback to top |