FC928203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_HALHL (Oligoribonuclease OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=orn PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.313e-30 Identity = 68/137 (49.64%), Postives = 87/137 (63.50%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL DRI+EIA ++TD L EGP L IHQ + LDSM EW H SGLTE+V S +TE EAE QV+ F+K+ V T + GNS+ D FL ++MPDL + F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLDPSRDRIIEIAVVVTDSNLDTLAEGPVLAIHQDRSLLDSMDEWNTRQHGRSGLTERVRASTVTEAEAEAQVLAFLKQYVPARTSPMCGNSICQDRRFLARWMPDLEAYFHYRHIDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_ACTSZ (Oligoribonuclease OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=orn PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.021e-30 Identity = 70/140 (50.00%), Postives = 87/140 (62.14%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ + LD M +WC H A+GL E+V S LTER AE Q ++F+K V + GNSV D FL KYMPDLA F + +DVS++K L W Sbjct: 5 KENLIWIDLEMTGLDPEQERIIEIATIVTDKNLNILAEGPVLAVHQPNQLLDKMSDWCIKTHTANGLVERVKASKLTERAAELQTIDFLKLWVPKGASPICGNSVAQDKRFLFKYMPDLADYFHYRHLDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_DICDI (Probable oligoribonuclease OS=Dictyostelium discoideum GN=rexo2-1 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.153e-30 Identity = 69/147 (46.94%), Postives = 94/147 (63.95%), Query Frame = 2 Query: 194 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 P+ E +VW+DLEMTGL I D ILE+A +ITD +L +GP+LVIH++ E L +M +WC HH SGLTE V +S ++ EAEK ++EFV+K+ LAGN+V+ D FL K MP A + ++DVS+IK L WY Sbjct: 10 PVINERSKRMVWVDLEMTGLDISKDVILEMAIVITDAELNVIEKGPNLVIHRSDEVLKNMNDWCIEHHGKSGLTEDVRNSKISLEEAEKIMLEFVRKHTDKGICPLAGNTVHEDRRFLLKEMPTFAEHLHYRIIDVSTIKELSRRWY 156
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_CAEEL (Probable oligoribonuclease OS=Caenorhabditis elegans GN=C08B6.8 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 8.790e-30 Identity = 62/138 (44.93%), Postives = 89/138 (64.49%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 ++WID EMTGL +E + EIA I+TD +L GPD+VIHQ KE LD+M EW +N +GL EK++ S + +AE +V++F+K + +AGNS+Y+D +F+KKYMP L + +DVS+IK L WY Sbjct: 15 IIWIDCEMTGLDVEKQTLCEIALIVTDSELNTIATGPDIVIHQPKEVLDNMEEWPRNTFHENGLMEKIIASKYSMADAENEVIDFLKLHALPGKSPIAGNSIYMDRLFIKKYMPKLDKFAHYRCIDVSTIKGLVQRWY 152
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_MARAV (Oligoribonuclease OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=orn PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.499e-29 Identity = 66/137 (48.18%), Postives = 88/137 (64.23%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL E +RI+E+A IITD +L EGP + IHQ L+ M EWC H ASGLT++V S ++E EAE+Q +EF+ K++ L GNS+ D FL KYMP L + F + +DVS++K L W Sbjct: 7 LIWIDLEMTGLDPEQERIIEMASIITDSQLNIVAEGPVIAIHQPDSLLEQMDEWCTRTHGASGLTQRVKESTISEAEAEQQTLEFLGKHLEPGQSPLCGNSIGQDRRFLVKYMPKLEAFFHYRNLDVSTVKELARRW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_MANSM (Oligoribonuclease OS=Mannheimia succiniciproducens (strain MBEL55E) GN=orn PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.499e-29 Identity = 68/137 (49.64%), Postives = 87/137 (63.50%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L M +WC H A+GL ++V S LTER AE Q ++F+KK V + GNSV D FL KYMP+LA F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLDPENERIIEIATIVTDKDLNILAEGPVLAVHQSDELLAKMSDWCIKTHSANGLVDRVKASKLTERAAELQTIDFLKKWVPKGASPICGNSVAQDKRFLFKYMPELADYFHYRHLDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_ACTP2 (Oligoribonuclease OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=orn PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.363e-29 Identity = 65/137 (47.45%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL E +RI+E+A I+TD L EGP L +HQ+ + L+ M +WC H +GL E+V S LTER E Q ++F+K+ V + GNSV D FL KYMPDLA F + +DVS++K L W Sbjct: 9 LIWIDLEMTGLDPEKERIIEVATIVTDKDLNILAEGPVLTVHQSNDLLNKMSDWCIKTHTENGLIERVKQSKLTERAVELQTIDFLKQWVPKGASPICGNSVAQDKRFLYKYMPDLADYFHYRHLDVSTLKELARRW 145
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_DROME (Probable oligoribonuclease OS=Drosophila melanogaster GN=CG10214 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.698e-29 Identity = 63/138 (45.65%), Postives = 86/138 (62.32%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 +VW+DLEMTGL IE D+ILE+ACIITD L EGP I+ +E DSM EWC HH SGL ++ S + EA V+ +++KN+ L GNSVY D +F+ K+MP + + + +VDVS+IK L W+ Sbjct: 38 IVWMDLEMTGLDIEKDKILEVACIITDQDLNVKSEGPCFAINHPQEVYDSMNEWCMKHHYNSGLIDRCKSSDVNLEEASNLVLSYLEKNIPKRACPLGGNSVYTDRLFIMKFMPLVDAYLHYRIVDVSTIKELAKRWH 175
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_HAEDU (Oligoribonuclease OS=Haemophilus ducreyi GN=orn PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.269e-28 Identity = 67/137 (48.91%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL DRI+EIA I+TD L +GP L +HQ L M EWC H A+GL E+V S LTER AE Q ++F+K+ V + + GNSV D FL +YMPDLA F + +DVS++K L W Sbjct: 9 LIWIDLEMTGLDPNQDRIIEIATIVTDKDLNILAKGPVLAVHQPNTLLSKMNEWCIKTHTANGLIERVKQSKLTERAAELQTLDFLKQWVMKGSSPICGNSVAQDKRFLYQYMPDLADYFHYRHLDVSTLKELARRW 145
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_VIBVY (Oligoribonuclease OS=Vibrio vulnificus (strain YJ016) GN=orn PE=3 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.658e-28 Identity = 64/137 (46.72%), Postives = 88/137 (64.23%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL +V +I+EIA I+TD +L EGP L IHQ++E L M EWC N H SGL E+V S +TE+EA +Q + F++K V + GNS+ D FL ++MP+L F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLDPDVHKIIEIASIVTDSELNILAEGPVLAIHQSEEELAKMDEWCTNTHTGSGLVERVRGSQITEQEAVEQTIAFLEKWVPKGVSPICGNSIGQDRRFLYRHMPELEGYFHYRYIDVSTLKELTRRW 144 The following BLAST results are available for this feature:
BLAST of FC928203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928203 ID=FC928203; Name=FC928203; organism=Citrus clementina; type=EST; length=636bpback to top |