FC928203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_ARATH (Oligoribonuclease OS=Arabidopsis thaliana GN=At2g26970 PE=2 SV=2) HSP 1 Score: 234.572 bits (597), Expect = 3.310e-61 Identity = 109/143 (76.22%), Postives = 129/143 (90.21%), Query Frame = 2 Query: 206 EYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 +YK PLVWIDLEMTGL +EVDRILEIACIIT+G LT+SVEGPDLV+ QTK+CLD M +WCQ HH ASGLT+KVL SA+TEREAE++V+EFVKK+VG+ PLLAGNSVYVDF+FLKKYMP+LA+LF H+LVDVSS+KALC W+ Sbjct: 41 DYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDCLDKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFLFLKKYMPELAALFPHILVDVSSVKALCARWF 183
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BOVIN (Oligoribonuclease, mitochondrial OS=Bos taurus GN=REXO2 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.980e-33 Identity = 67/138 (48.55%), Postives = 91/138 (65.94%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 +VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH SGLT+ V S +T ++AE + + FV++ LAGNSV+ D FL KYMP + ++DVS++K LC WY Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHGKSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHLHYRIIDVSTVKELCRRWY 180
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_HUMAN (Oligoribonuclease, mitochondrial OS=Homo sapiens GN=REXO2 PE=1 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 8.494e-33 Identity = 67/138 (48.55%), Postives = 91/138 (65.94%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 +VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH SGLT+ V S +T ++AE + + FV++ LAGNSV+ D FL KYMP + ++DVS++K LC WY Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHLHYRIIDVSTVKELCRRWY 180
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_RAT (Oligoribonuclease, mitochondrial OS=Rattus norvegicus GN=Rexo2 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.472e-32 Identity = 66/138 (47.83%), Postives = 91/138 (65.94%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 +VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH SGLT+ V S +T ++AE + + FV++ LAGNSV+ D FL K+MP + ++DVS++K LC WY Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKHMPQFMKHLHYRIIDVSTVKELCRRWY 180
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_MOUSE (Oligoribonuclease, mitochondrial OS=Mus musculus GN=Rexo2 PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 2.472e-32 Identity = 66/138 (47.83%), Postives = 91/138 (65.94%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 +VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH SGLT+ V S +T ++AE + + FV++ LAGNSV+ D FL K+MP + ++DVS++K LC WY Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKHMPQFMKHLHYRIIDVSTVKELCRRWY 180
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_PASMU (Oligoribonuclease OS=Pasteurella multocida GN=orn PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.092e-31 Identity = 71/140 (50.71%), Postives = 89/140 (63.57%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 K L+WIDLEMTGL E +RI+EIA I+TD L EGP L IHQ+ ECL M +WC H +GL E+V +S LTER AE Q ++F+KK V + GNSV D FL KYMP+LA F + +DVS++K L W Sbjct: 5 KQNLIWIDLEMTGLDPESERIIEIATIVTDKHLNILAEGPVLAIHQSDECLAKMNDWCMKTHTENGLVERVKNSRLTERAAELQTLDFLKKWVPKGVSPICGNSVSQDKRFLFKYMPELADYFHYRHLDVSTLKELASRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_HAEIG (Oligoribonuclease OS=Haemophilus influenzae (strain PittGG) GN=orn PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 70/140 (50.00%), Postives = 89/140 (63.57%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ H +GL E+V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA F + +DVS++K L W Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLADYFHYRHLDVSTLKELAARW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_HAEIE (Oligoribonuclease OS=Haemophilus influenzae (strain PittEE) GN=orn PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 70/140 (50.00%), Postives = 89/140 (63.57%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ H +GL E+V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA F + +DVS++K L W Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLADYFHYRHLDVSTLKELAARW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_HAEI8 (Oligoribonuclease OS=Haemophilus influenzae (strain 86-028NP) GN=orn PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 70/140 (50.00%), Postives = 89/140 (63.57%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ H +GL E+V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA F + +DVS++K L W Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLADYFHYRHLDVSTLKELAARW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_HAEIN (Oligoribonuclease OS=Haemophilus influenzae GN=orn PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.569e-31 Identity = 69/140 (49.29%), Postives = 89/140 (63.57%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ H +GL E++ S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA F + +DVS++K L W Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQKTHSENGLIERIKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLADYFHYRHLDVSTLKELAARW 144 The following BLAST results are available for this feature:
BLAST of FC928203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928203 ID=FC928203; Name=FC928203; organism=Citrus clementina; type=EST; length=636bpback to top |