FC928203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_KLEP7 (Oligoribonuclease OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=orn PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.519e-25 Identity = 59/137 (43.07%), Postives = 82/137 (59.85%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ L M EW H SGL ++V S ++E +AE ++F+K+ V + GNS+ D FL KYMP L + F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLALMDEWNVRTHTGSGLVDRVKASTVSEHDAELATIDFLKQWVPAGKSPICGNSIGQDRRFLFKYMPQLEAYFHYRYLDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_FRATT (Oligoribonuclease OS=Francisella tularensis subsp. tularensis GN=orn PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.514e-25 Identity = 57/137 (41.61%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL ++ +I EIA IITD L E + I+Q E L +M EWC H +GLT++V S ++ AE+Q++EF++K V + L GNS++ D FL KYMP++ + ++DV+++K L W Sbjct: 7 LIWIDLEMTGLDVDSCKITEIAAIITDKDLNIIAEAEPIAIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCGNSIWQDRRFLAKYMPNIDEYCHYRMLDVTTLKLLNQYW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_FRAT1 (Oligoribonuclease OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=orn PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.514e-25 Identity = 57/137 (41.61%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL ++ +I EIA IITD L E + I+Q E L +M EWC H +GLT++V S ++ AE+Q++EF++K V + L GNS++ D FL KYMP++ + ++DV+++K L W Sbjct: 7 LIWIDLEMTGLDVDSCKITEIAAIITDKDLNIIAEAEPIAIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCGNSIWQDRRFLAKYMPNIDEYCHYRMLDVTTLKLLNQYW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_ERWCT (Oligoribonuclease OS=Erwinia carotovora subsp. atroseptica GN=orn PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.514e-25 Identity = 60/137 (43.80%), Postives = 83/137 (60.58%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL + DRI+EIA ++TD L EGP L +HQ+ L M +W H ASGLT++V S ER AE + + F++K V + GNS+ D FL +YMP+L + F + +DVS++K L W Sbjct: 7 LIWIDLEMTGLNPDHDRIIEIATLVTDANLNVLAEGPVLAVHQSDSQLALMDDWNVRTHGASGLTDRVKVSTADERAAELETLAFLQKWVPAGKSPICGNSIGQDRRFLFRYMPELEAYFHYRYLDVSTLKELARRW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_YEAST (Oligoribonuclease, mitochondrial OS=Saccharomyces cerevisiae GN=REX2 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.112e-24 Identity = 72/163 (44.17%), Postives = 100/163 (61.35%), Query Frame = 2 Query: 164 TLENQQN-SQTP-LEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKL--TKSVEGP-----DLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVK-----KNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSI 610 T++N Q+ +QTP L+ + PLVWID EMTGL DRI+EI CIITDG L K+ +G + VIH E ++ M EWC HH SGLT KVL S T + E +++E+++ KNVG +LAGNSV++D +F+ + P + + +VDVSSI Sbjct: 34 TIQNLQSMAQTPELKTKLFKPLVWIDCEMTGLDHVNDRIIEICCIITDGHLAPVKAADGQGDSHYESVIHYGPEVMNKMNEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIPDKNVG----VLAGNSVHMDRLFMVREFPKVIDHLFYRIVDVSSI 192
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_NEIMA (Oligoribonuclease OS=Neisseria meningitidis serogroup A GN=orn PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.112e-24 Identity = 58/140 (41.43%), Postives = 85/140 (60.71%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 K L W+D+EMTGL E DRI+E+A IITD L + IHQ+ E LD+M EW H +GLT++V S+ TE E E+++++F+ + V + GNS++ D F+ KYMP L + F + +DVS++K L W Sbjct: 4 KNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEVYAIHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPRRATPMCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BURS3 (Oligoribonuclease OS=Burkholderia sp. (strain 383) GN=orn PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.112e-24 Identity = 57/150 (38.00%), Postives = 90/150 (60.00%), Query Frame = 2 Query: 182 NSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 ++ P ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP IHQ+ E L M +W ++ H SGL ++V S +TE EA +Q+ F+ + V + GNS+ D F+ ++MP+ F + +DVS++K LC W Sbjct: 7 STSQPALVRNELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDIAVEGPVFAIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEAEAAEQLQAFLAQYVSPGKSPMCGNSICQDRRFMARWMPEFERFFHYRNLDVSTLKELCRRW 156
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_DICNV (Oligoribonuclease OS=Dichelobacter nodosus (strain VCS1703A) GN=orn PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.452e-24 Identity = 61/141 (43.26%), Postives = 82/141 (58.16%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 K LVWIDLEMTGL + D I+EIA I+TD +L EGP + ++Q + L M W Q HH ASGL E+V S+ EAE Q + F+++ + GNS+ D FL + MP L + F + +DVS+IK L WY Sbjct: 4 KNNLVWIDLEMTGLDPQHDEIIEIATIVTDAQLNILAEGPVIAVYQPEPILAQMDAWNQKHHGASGLIERVRQSSFNTLEAEAQTLSFLEQYSEKGRSPICGNSICQDRRFLSRLMPRLEAFFHYRNLDVSTIKELVARWY 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BUCAI (Oligoribonuclease OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=orn PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.452e-24 Identity = 62/140 (44.29%), Postives = 85/140 (60.71%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 K L+WIDLEMTGL +V RI+EIA +ITD L EGP + I+Q KE + M EW + HE +GL ++V S E++AE + + F+KK V + GNS+ D FL +YMP L + F + +DVS+IK L W Sbjct: 5 KKNLIWIDLEMTGLNPKVHRIIEIATLITDTNLNIIAEGPVIPIYQKKEHILVMDEWNKRIHENNGLIKRVEKSLYNEQKAEHETILFLKKWVPIQVSPMCGNSIAQDRRFLFQYMPHLENYFHYRYIDVSTIKELAYRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BURCH (Oligoribonuclease OS=Burkholderia cenocepacia (strain HI2424) GN=orn PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.897e-24 Identity = 57/150 (38.00%), Postives = 89/150 (59.33%), Query Frame = 2 Query: 182 NSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 ++ P ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP IHQ+ E L M +W ++ H SGL ++V S +TE EA Q+ F+ + V + GNS+ D F+ ++MP+ F + +DVS++K LC W Sbjct: 7 SASQPALVRNELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDIAVEGPVFAIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEAEAAAQLQAFLAQYVSPGKSPMCGNSICQDRRFMARWMPEFERFFHYRNLDVSTLKELCRRW 156 The following BLAST results are available for this feature:
BLAST of FC928203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928203 ID=FC928203; Name=FC928203; organism=Citrus clementina; type=EST; length=636bpback to top |