FC928203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BURCA (Oligoribonuclease OS=Burkholderia cenocepacia (strain AU 1054) GN=orn PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.897e-24 Identity = 57/150 (38.00%), Postives = 89/150 (59.33%), Query Frame = 2 Query: 182 NSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 ++ P ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP IHQ+ E L M +W ++ H SGL ++V S +TE EA Q+ F+ + V + GNS+ D F+ ++MP+ F + +DVS++K LC W Sbjct: 7 SASQPALVRNELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDIAVEGPVFAIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEAEAAAQLQAFLAQYVSPGKSPMCGNSICQDRRFMARWMPEFERFFHYRNLDVSTLKELCRRW 156
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_XANCP (Oligoribonuclease OS=Xanthomonas campestris pv. campestris GN=orn PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.477e-24 Identity = 59/137 (43.07%), Postives = 82/137 (59.85%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL + D I+EIA I+TD +L EGP+L I + E L++M EW +N H SGL ++VL S +T +AE Q V F+ + + + GNS+ D FL + M L F + +DVS+IK L W Sbjct: 11 LIWIDLEMTGLDTDRDSIIEIATIVTDAQLNVLAEGPELAIAHSLETLEAMDEWNRNQHRRSGLWQRVLDSQVTHAQAEAQTVAFLSEWIRAGASPMCGNSICQDRRFLHRQMSRLERYFHYRNLDVSTIKELARRW 147
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_XANC8 (Oligoribonuclease OS=Xanthomonas campestris pv. campestris (strain 8004) GN=orn PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.477e-24 Identity = 59/137 (43.07%), Postives = 82/137 (59.85%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL + D I+EIA I+TD +L EGP+L I + E L++M EW +N H SGL ++VL S +T +AE Q V F+ + + + GNS+ D FL + M L F + +DVS+IK L W Sbjct: 11 LIWIDLEMTGLDTDRDSIIEIATIVTDAQLNVLAEGPELAIAHSLETLEAMDEWNRNQHRRSGLWQRVLDSQVTHAQAEAQTVAFLSEWIRAGASPMCGNSICQDRRFLHRQMSRLERYFHYRNLDVSTIKELARRW 147
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_NEIMF (Oligoribonuclease OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=orn PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.477e-24 Identity = 60/141 (42.55%), Postives = 87/141 (61.70%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 K L W+D+EMTGL E DRI+E+A IITD L + +HQ+ E LD+M EW H +GLT++V S TE E E+++++F+ + V G TP + GNS++ D F+ KYMP L + F + +DVS++K L W Sbjct: 4 KNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEVYAVHQSDELLDNMDEWNTATHGRTGLTQRVRESLHTEAEVEQKLLDFMSEWVPGRATP-MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_COLP3 (Oligoribonuclease OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=orn PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.477e-24 Identity = 60/137 (43.80%), Postives = 81/137 (59.12%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+W+DLEMTGL+ D ILEIA IITD +L +GP I QT + LD+M WC HH SGLT++ S ++ A K+ + FV++ V + GNS+ D F+ KYMPD F + +DVS+IK L W Sbjct: 8 LIWLDLEMTGLEPVEDVILEIAIIITDSELNILAQGPIFAISQTDDVLDNMNPWCIEHHGKSGLTQRCRDSEVSLAHATKESLAFVQEWVPQGKSPMCGNSIGQDRRFINKYMPDFEDHFHYRNLDVSTIKELAKRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_PSEMY (Oligoribonuclease OS=Pseudomonas mendocina (strain ymp) GN=orn PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.235e-24 Identity = 60/137 (43.80%), Postives = 82/137 (59.85%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL+ E D I+E+A I+TD +L EGP + IHQ+ E L M EW H SGLT++V S + AE Q + F+++ V + GNS+ D FL KYMP L + F + +DVS++K L W Sbjct: 7 LIWIDLEMTGLEPERDVIIEMATIVTDSELNVLAEGPVIAIHQSDETLAGMDEWNTRTHGQSGLTQRVRESRIDTATAEAQTIAFLEQWVPKGKSPICGNSIGQDRRFLYKYMPALEAYFHYRYLDVSTLKILAGMW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_NEIG1 (Oligoribonuclease OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=orn PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.235e-24 Identity = 59/141 (41.84%), Postives = 88/141 (62.41%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 K L W+D+EMTGL E DRI+E+A IITD L + IHQ+ + LD+M EW H +GLT++V S+ TE E E+++++F+ + + G TP + GNS++ D F+ KYMP L + F + +DVS++K L W Sbjct: 4 KNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEVYAIHQSDDLLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWIPGRATP-MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_XANC5 (Oligoribonuclease OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=orn PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.226e-24 Identity = 59/137 (43.07%), Postives = 81/137 (59.12%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL + D I+EIA I+TD +L EGP+L I E L++M EW +N H SGL ++VL S +T +AE Q V F+ + + + GNS+ D FL + M L F + +DVS+IK L W Sbjct: 11 LIWIDLEMTGLDTDRDSIIEIATIVTDAQLNVLAEGPELAIAHPLETLEAMDEWNRNQHRRSGLWQRVLDSQVTHAQAEAQTVAFLSEWIRAGASPMCGNSICQDRRFLHRQMSRLERYFHYRNLDVSTIKELARRW 147
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BURCM (Oligoribonuclease OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=orn PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.226e-24 Identity = 56/150 (37.33%), Postives = 89/150 (59.33%), Query Frame = 2 Query: 182 NSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 ++ P ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP IHQ+ E L M +W ++ H SGL ++V S +TE +A Q+ F+ + V + GNS+ D F+ ++MP+ F + +DVS++K LC W Sbjct: 7 SASQPALVRNELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDIAVEGPVFAIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEADAAAQLQAFLAQYVSPGKSPMCGNSICQDRRFMARWMPEFERFFHYRNLDVSTLKELCRRW 156
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_SHESW (Oligoribonuclease OS=Shewanella sp. (strain W3-18-1) GN=orn PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.519e-24 Identity = 58/137 (42.34%), Postives = 84/137 (61.31%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL+ +VDRI+EIA ++TD +L +GP + IHQ E L +M +W Q HH SGL ++V S E +A + + F+++ V + GNSV D FL +YM +L F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLEPDVDRIIEIATLVTDQELNIIGQGPVIAIHQPDEVLAAMDDWNQKHHGESGLIDRVRASQDNEAQAVAKTIAFLEQYVPKGASPMCGNSVGQDRRFLNRYMRELEDYFHYRNLDVSTVKELVKRW 144 The following BLAST results are available for this feature:
BLAST of FC928203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928203 ID=FC928203; Name=FC928203; organism=Citrus clementina; type=EST; length=636bpback to top |