FC928203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_PSEE4 (Oligoribonuclease OS=Pseudomonas entomophila (strain L48) GN=orn PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.165e-22 Identity = 56/137 (40.88%), Postives = 81/137 (59.12%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL + D I+E+A I+TD +L EGP + IH + E L M EW H SGLT++V S ++ EAE Q + F+++ V + GNS+ D FL ++M L + F + +DVS++K L W Sbjct: 7 LIWIDLEMTGLDPDSDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEWNTRTHGNSGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMRGLENYFHYRNLDVSTLKELAARW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_PSEPF (Oligoribonuclease OS=Pseudomonas fluorescens (strain Pf0-1) GN=orn PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.151e-21 Identity = 57/137 (41.61%), Postives = 79/137 (57.66%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL E D I+E+A I+TD L EGP + IH + E L M EW H SGLT++V S ++ EAE + + F+++ V + GNS+ D FL +M L S F + +DVS++K L W Sbjct: 7 LIWIDLEMTGLDPENDVIIEMATIVTDSDLNTLAEGPVIAIHHSDEVLARMDEWNTRTHGNSGLTQRVRESRVSMAEAEAETIAFLEQWVPKGKSPICGNSICQDRRFLYTHMKALESYFHYRNLDVSTLKELAARW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_PROAC (Oligoribonuclease OS=Propionibacterium acnes GN=orn PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.151e-21 Identity = 60/143 (41.96%), Postives = 84/143 (58.74%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPL-----LAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 LVWID EMTGL + D ++E+A ++TDG+L EG D++I + LD M ++ +N H SGL + L LT +A+ QV+++++ TY P LAGN++ D FL K MP L S + VDVSSIK L WY Sbjct: 2 LVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPEPQWLDHMNDFVRNMHTTSGLLAE-LDKGLTMAQAQDQVLDYIR----TYVPQAGKAPLAGNTIGTDRSFLAKDMPKLESYVHYRNVDVSSIKELARRWY 139
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_COREF (Oligoribonuclease OS=Corynebacterium efficiens GN=orn PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.963e-21 Identity = 55/138 (39.86%), Postives = 84/138 (60.87%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 LVW+DLEMTGL +E I+E+A ++TD L EG DLV+H T E L M ++ H++SGLT + S ++ ++AE V+ ++++ P LAGNS+ D F+++ MP L + + +VDVSS+K L W Sbjct: 21 LVWVDLEMTGLDLERHVIVEVAALVTDANLNILGEGVDLVVHATDEELARMDDFVTRMHDSSGLTPLIRASTVSLKDAEDAVLALIEEHCDPAHPAPLAGNSIATDRAFIREQMPRLDAALHYRMVDVSSVKELARRW 158
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_TROWT (Oligoribonuclease OS=Tropheryma whipplei (strain Twist) GN=orn PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.373e-21 Identity = 52/137 (37.96%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 LVW+D EMTGL E D +LE+A ++TD L EG ++V+ + E L +M + H SGL ++ L + + EA+ V E++ K+V T +++GNS+ D +F+ +YMPD+ ++ + ++DVSSIK L + W Sbjct: 10 LVWVDCEMTGLNPERDELLEVAVVVTDKDLLPLDEGVNVVVSPSSEALGAMDNYVARMHRVSGLLDE-LSNGVPVSEAQAMVKEYITKHVKT-GGIMSGNSIATDRLFITRYMPDVHAILHYRMIDVSSIKELAVRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_TROW8 (Oligoribonuclease OS=Tropheryma whipplei (strain TW08/27) GN=orn PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.373e-21 Identity = 52/137 (37.96%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 LVW+D EMTGL E D +LE+A I+TD L EG ++V+ + E L +M + H SGL ++ L + + EA+ V E++ K++ T +++GNS+ D +F+ +YMPD+ ++ + ++DVSSIK L + W Sbjct: 10 LVWVDCEMTGLNPERDELLEVAVIVTDKDLLPLDEGVNVVVSPSSEALGAMDNYVARMHRVSGLLDE-LSNGVPVSEAQAMVKEYITKHIKT-GGIMSGNSIATDRLFITRYMPDVHAILHYRMIDVSSIKELAVRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_CORDI (Oligoribonuclease OS=Corynebacterium diphtheriae GN=orn PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.373e-21 Identity = 57/138 (41.30%), Postives = 82/138 (59.42%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 LVWIDLEMTGL+++ I+E+A +ITD L EG DLV+H T E L M ++ H +SGL E++ S ++ +EAE V+ + ++ P LAGNS+ D F++ MP L + +VDVSS+K L W Sbjct: 12 LVWIDLEMTGLELDRHVIVEVAALITDADLNIIGEGVDLVVHATPEQLAEMDDFVTTMHTSSGLLEEIKASTVSLQEAEDAVLALIAQHCDPEHPAPLAGNSIATDRSFIRAQMPRLDKALHYRMVDVSSLKELSRRW 149
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_MYCTU (Oligoribonuclease OS=Mycobacterium tuberculosis GN=orn PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.742e-21 Identity = 55/139 (39.57%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 LVWID EMTGL + D+++EIA ++TD L +G D+V+H L M + H SGL ++V S + AE V++++ ++V T LAGNS+ D F+ + MP L S + ++DVSSIK LC WY Sbjct: 5 LVWIDCEMTGLDLGSDKLIEIAALVTDADLNILGDGVDVVMHADDAALSGMIDVVAEMHSRSGLIDEVKASTVDLATAEAMVLDYINEHVKQPKTAPLAGNSIATDRAFIARDMPTLDSFLHYRMIDVSSIKELCRRWY 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_MYCTA (Oligoribonuclease OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=orn PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.742e-21 Identity = 55/139 (39.57%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 LVWID EMTGL + D+++EIA ++TD L +G D+V+H L M + H SGL ++V S + AE V++++ ++V T LAGNS+ D F+ + MP L S + ++DVSSIK LC WY Sbjct: 5 LVWIDCEMTGLDLGSDKLIEIAALVTDADLNILGDGVDVVMHADDAALSGMIDVVAEMHSRSGLIDEVKASTVDLATAEAMVLDYINEHVKQPKTAPLAGNSIATDRAFIARDMPTLDSFLHYRMIDVSSIKELCRRWY 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_MYCBP (Oligoribonuclease OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=orn PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.742e-21 Identity = 55/139 (39.57%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 LVWID EMTGL + D+++EIA ++TD L +G D+V+H L M + H SGL ++V S + AE V++++ ++V T LAGNS+ D F+ + MP L S + ++DVSSIK LC WY Sbjct: 5 LVWIDCEMTGLDLGSDKLIEIAALVTDADLNILGDGVDVVMHADDAALSGMIDVVAEMHSRSGLIDEVKASTVDLATAEAMVLDYINEHVKQPKTAPLAGNSIATDRAFIARDMPTLDSFLHYRMIDVSSIKELCRRWY 143 The following BLAST results are available for this feature:
BLAST of FC928203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928203 ID=FC928203; Name=FC928203; organism=Citrus clementina; type=EST; length=636bpback to top |