FC928203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_MYCBO (Oligoribonuclease OS=Mycobacterium bovis GN=orn PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.742e-21 Identity = 55/139 (39.57%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 LVWID EMTGL + D+++EIA ++TD L +G D+V+H L M + H SGL ++V S + AE V++++ ++V T LAGNS+ D F+ + MP L S + ++DVSSIK LC WY Sbjct: 5 LVWIDCEMTGLDLGSDKLIEIAALVTDADLNILGDGVDVVMHADDAALSGMIDVVAEMHSRSGLIDEVKASTVDLATAEAMVLDYINEHVKQPKTAPLAGNSIATDRAFIARDMPTLDSFLHYRMIDVSSIKELCRRWY 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_MYCSS (Oligoribonuclease OS=Mycobacterium sp. (strain MCS) GN=orn PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.662e-20 Identity = 57/139 (41.01%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 LVWID EMTGL + D ++EIA ++TD L +G D+VIH E LD+M H SGL E+V S + AE+ V+++++ +V T LAGNS+ D F+ + M L + ++DVSSIK LC WY Sbjct: 5 LVWIDCEMTGLDLRSDLLIEIAVLVTDADLNILGDGLDVVIHAPDEALDAMIPVVTEMHTRSGLIEEVRASTVDLATAEEMVLDYIRGHVKQAKTAPLAGNSIATDRGFIARDMAKLDDYLHYRMIDVSSIKELCRRWY 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_MYCSK (Oligoribonuclease OS=Mycobacterium sp. (strain KMS) GN=orn PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.662e-20 Identity = 57/139 (41.01%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 LVWID EMTGL + D ++EIA ++TD L +G D+VIH E LD+M H SGL E+V S + AE+ V+++++ +V T LAGNS+ D F+ + M L + ++DVSSIK LC WY Sbjct: 5 LVWIDCEMTGLDLRSDLLIEIAVLVTDADLNILGDGLDVVIHAPDEALDAMIPVVTEMHTRSGLIEEVRASTVDLATAEEMVLDYIRGHVKQAKTAPLAGNSIATDRGFIARDMAKLDDYLHYRMIDVSSIKELCRRWY 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_MYCSJ (Oligoribonuclease OS=Mycobacterium sp. (strain JLS) GN=orn PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.662e-20 Identity = 57/139 (41.01%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 LVWID EMTGL + D ++EIA ++TD L +G D+VIH E LD+M H SGL E+V S + AE+ V+++++ +V T LAGNS+ D F+ + M L + ++DVSSIK LC WY Sbjct: 5 LVWIDCEMTGLDLRSDLLIEIAVLVTDADLNILGDGLDVVIHAPDEALDAMIPVVTEMHTRSGLIEEVRASTVDLATAEEMVLDYIRGHVKQAKTAPLAGNSIATDRGFIARDMAKLDDYLHYRMIDVSSIKELCRRWY 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_MYCLE (Oligoribonuclease OS=Mycobacterium leprae GN=orn PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.170e-20 Identity = 57/139 (41.01%), Postives = 79/139 (56.83%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 LVWID EMTGL + D+++EIA ++TD L +G D+VIH L SM + H SGL +V S + AE V++++ +V T LAGNS+ D F+ + MP L S + ++DVSSIK LC WY Sbjct: 5 LVWIDCEMTGLDLGSDQLIEIAALVTDADLNILGDGVDVVIHIDSTALSSMIDVVAEMHSRSGLINEVESSIVDLVTAESIVLDYINNHVKQPKTAPLAGNSIATDRSFIARDMPTLDSFLHYRMIDVSSIKELCRRWY 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_LEIXX (Oligoribonuclease OS=Leifsonia xyli subsp. xyli GN=orn PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.407e-19 Identity = 58/139 (41.73%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 LVWID EMTGL + VD ++EIA +ITD L G +VI LD+M ++ + H SGL E++ ++ EAE + +E+V + T LAGN++ D MFL KYMP L + + VDVSSIK L W+ Sbjct: 8 LVWIDCEMTGLDLAVDELVEIAVVITDFDLNVLDPGLSIVIKPDASALDNMNDFVREMHTTSGLIEEI-PGGVSLAEAEYEALEYVLRFAPAARTAPLAGNTIGTDRMFLAKYMPRLDTHLHYRNVDVSSIKELARRWF 145
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_STRGR (Oligoribonuclease OS=Streptomyces griseus GN=orn PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18 Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 +VWID EMTGL + D ++E+A ++TD +L EG D+VI L++M E + H ASGL ++ L T +AE+QV+ +V+++V L GNSV D FL + M +L + +VDVSS+K L WY Sbjct: 5 MVWIDCEMTGLSLADDALIEVAALVTDSELNVLGEGVDIVIRPPDAALETMPEVVRQMHTASGLLDE-LAGGTTLADAEEQVLAYVREHVKEPGKAPLCGNSVGTDRGFLARDMRELEGYLHYRIVDVSSVKELARRWY 142
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_STRAW (Oligoribonuclease OS=Streptomyces avermitilis GN=orn PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.031e-18 Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 +VWID EMTGL + D ++E+A ++TD +L EG D+VI L++M E + H ASGL ++ L + T +AE QV+ +V+++V L GNSV D FL + M L + + +VDVSS+K L WY Sbjct: 5 MVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPDAALETMPEVVRTMHTASGLLDE-LAAGTTLADAEAQVLAYVREHVKEPGKAPLCGNSVGTDRGFLARDMSALETYLHYRIVDVSSVKELARRWY 142
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_STRCO (Oligoribonuclease OS=Streptomyces coelicolor GN=orn PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.653e-18 Identity = 56/139 (40.29%), Postives = 79/139 (56.83%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 +VWID EMTGL + D ++E+A ++TD +L EG D+VI + L++M E + H ASGL + L T +AE QV+ +V+++V L GNSV D FL + M L + +VDVSSIK L WY Sbjct: 5 MVWIDCEMTGLSLSDDALIEVAALVTDSELNILGEGVDIVIRPPERALETMPEVVREMHTASGLLAE-LDGGTTLADAEAQVLAYVREHVKEPGKAPLCGNSVGTDRGFLLRDMATLEGYLHYRIVDVSSIKELARRWY 142
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BIFLO (Oligoribonuclease OS=Bifidobacterium longum GN=orn PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.901e-16 Identity = 54/140 (38.57%), Postives = 80/140 (57.14%), Query Frame = 2 Query: 221 LVWIDLEMTGLKI-EVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGT-YTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 L+WID EMTGL I D ++E++ + TD L EG D VI +++ ++ M ++ + H SGL + + L+ EAE++V E+V + PLLAGN++ D FL YMP+L S + VDVS+ K L WY Sbjct: 17 LIWIDCEMTGLDIFGGDELVEVSVVPTDFDLNVLDEGVDYVIKPSEKAVNHMNDFVRQMHTRSGLINE-WENGLSLAEAEQKVTEYVLRFTPEGVRPLLAGNTIGSDKKFLDHYMPNLMSHLHYRSVDVSTFKELARRWY 155 The following BLAST results are available for this feature:
BLAST of FC928203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928203 ID=FC928203; Name=FC928203; organism=Citrus clementina; type=EST; length=636bpback to top |