FC928203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_YERE8 (Oligoribonuclease OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=orn PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.083e-27 Identity = 64/137 (46.72%), Postives = 84/137 (61.31%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H SGL E+V S + +AE Q +EF+K+ V T + GNSV D FL +YMP+L + F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSDEQLGLMDEWNVRTHTGSGLVERVKASPFNDHDAELQTIEFLKQWVPAGTSPICGNSVGQDRRFLFRYMPELEAYFHYRYLDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_CORGB (Oligoribonuclease OS=Corynebacterium glutamicum (strain R) GN=orn PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.083e-27 Identity = 65/157 (41.40%), Postives = 95/157 (60.51%), Query Frame = 2 Query: 167 LENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 + +N+ TP LVW+DLEMTGL ++ I+E+A ++TD L EG DLV+H T+E L M ++ N HE+SGLTE++ SA+T +EAE V+ ++K+ P LAGNS+ D F+++ MP L + +VDVSS+K L WY Sbjct: 1 MSESENNTTPAVAARDDRLVWVDLEMTGLDLKRHVIVEVAALVTDANLNVLGEGVDLVVHATEEELAQMDDFVTNMHESSGLTEQIRESAVTLKEAEDAVLALIEKHCDPAHPAPLAGNSIATDRAFIREQMPRLDEALHYRMVDVSSVKELARRWY 157
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_PHOLL (Oligoribonuclease OS=Photorhabdus luminescens subsp. laumondii GN=orn PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.965e-27 Identity = 64/137 (46.72%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL E DRI+EIA I+TD L EGP + +HQ+ E L M +W H SGL E+V S + +REAEK +EF++K V + GNSV D FL +YMP+L + F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATIVTDANLNILDEGPVIAVHQSDEQLALMDKWNVRTHTGSGLVERVKASKIDDREAEKATIEFLEKWVPAGASPICGNSVSQDRRFLFRYMPELEAYFHYRYLDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_ECOLI (Oligoribonuclease OS=Escherichia coli (strain K12) GN=orn PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 9.097e-27 Identity = 63/137 (45.99%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H ASGL E+V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_ECOL6 (Oligoribonuclease OS=Escherichia coli O6 GN=orn PE=3 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 9.097e-27 Identity = 63/137 (45.99%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H ASGL E+V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_ECOHS (Oligoribonuclease OS=Escherichia coli O9:H4 (strain HS) GN=orn PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.097e-27 Identity = 63/137 (45.99%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H ASGL E+V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_ECO24 (Oligoribonuclease OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=orn PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.097e-27 Identity = 63/137 (45.99%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H ASGL E+V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BUCAP (Oligoribonuclease OS=Buchnera aphidicola subsp. Schizaphis graminum GN=orn PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.097e-27 Identity = 63/137 (45.99%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL E+ RI+EIA +ITD KL EGP + IHQ +E + M EW H+ +GL ++V S E +AE + + F+KK V + + GNSVY D FL +YMP+L + F + +DVS+IK L W Sbjct: 8 LIWIDLEMTGLNSEIHRIIEIATVITDTKLNIISEGPVIAIHQKEEHIVIMDEWNTKIHKKNGLIKRVQKSIYNESKAESKTIFFLKKWVPIQSSPICGNSVYQDRKFLARYMPNLENYFHYRCIDVSTIKELVNRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_PSEA6 (Oligoribonuclease OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=orn PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.188e-26 Identity = 61/137 (44.53%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 LVWID+EMTGL EVD +LEIA I+TD L EGP L IHQ+ + L++M +WC + H SGLTE+ S + E+ A + + F++K V L GN++ D F+ KYMP+L F + +DVS++K L W Sbjct: 8 LVWIDMEMTGLHPEVDVVLEIATIVTDANLNILAEGPVLAIHQSDDVLNNMNQWCIDTHGKSGLTERSRKSTVDEQTAVAETIRFLEKYVPKGASPLCGNTIGQDRRFMVKYMPELEDYFHYRNIDVSTLKELVKRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BURXL (Oligoribonuclease OS=Burkholderia xenovorans (strain LB400) GN=orn PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.188e-26 Identity = 59/139 (42.45%), Postives = 89/139 (64.03%), Query Frame = 2 Query: 215 MPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 M LVW+D+EMTGL+ + DRI+EIA ++T+ L + VEGP L IHQ+ E L M +W QN H SGL ++V S ++E +A +Q+ +F+ V + GNS+ D F+ ++MP+L F + +DVS++K LC W Sbjct: 18 MNLVWLDMEMTGLEPDSDRIIEIAVVVTNSTLDRMVEGPVLAIHQSDETLAGMDQWNQNTHGRSGLIDRVKASTVSEADATEQIRDFLSVYVPPGKSPMCGNSICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRW 156 The following BLAST results are available for this feature:
BLAST of FC928203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928203 ID=FC928203; Name=FC928203; organism=Citrus clementina; type=EST; length=636bpback to top |