FC928203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BURPS (Oligoribonuclease OS=Burkholderia pseudomallei GN=orn PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.188e-26 Identity = 58/140 (41.43%), Postives = 90/140 (64.29%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP L IHQ+ E L M +W +N H SGL ++V S++TE +A Q+ F+ ++V + GNS+ D F+ ++MP+L F + +DVS++K LC W Sbjct: 17 ELNLVWLDMEMTGLDPDTDRIIEIAVVVTNSTLDIAVEGPVLAIHQSDETLAKMDDWNKNTHGRSGLIDRVRASSVTEADAAAQIAAFLARHVPPGKSPMCGNSICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRW 156
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BURP0 (Oligoribonuclease OS=Burkholderia pseudomallei (strain 1106a) GN=orn PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.188e-26 Identity = 58/140 (41.43%), Postives = 90/140 (64.29%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP L IHQ+ E L M +W +N H SGL ++V S++TE +A Q+ F+ ++V + GNS+ D F+ ++MP+L F + +DVS++K LC W Sbjct: 17 ELNLVWLDMEMTGLDPDTDRIIEIAVVVTNSTLDIAVEGPVLAIHQSDETLAKMDDWNKNTHGRSGLIDRVRASSVTEADAAAQIAAFLARHVPPGKSPMCGNSICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRW 156
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_ALCBS (Oligoribonuclease OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=orn PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.188e-26 Identity = 61/137 (44.53%), Postives = 81/137 (59.12%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL E DRI+EIA I+TD +L EGP L +HQ+ LD M EW HH SGL +V S + + AE Q + F+++ V + GNS+ D FL YMP L + F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLSPENDRIIEIATIVTDAELNVLAEGPVLAVHQSDALLDGMDEWNTTHHNNSGLVARVKASTVNDAAAESQTIAFLEQYVEAGMSPMCGNSICQDRRFLANYMPKLEAFFHYRNLDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_PHOPR (Oligoribonuclease OS=Photobacterium profundum GN=orn PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.552e-26 Identity = 60/137 (43.80%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+W+DLEMTGL E+ +I+EIA I+TD +L EGP L IHQ++ L M +WC N H SGL E++ S TE +A +Q + F+++ V + GNS+ D FL K+MP+L F + +DVS+IK L W Sbjct: 8 LIWVDLEMTGLDPEIHQIIEIATIVTDAQLNILAEGPVLAIHQSEAELAKMDDWCTNTHTNSGLVERIRQSKFTEEDAIRQTIAFLEQWVPKGASPICGNSIGQDRRFLYKHMPELEQYFHYRYLDVSTIKELTRRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BURP6 (Oligoribonuclease OS=Burkholderia pseudomallei (strain 668) GN=orn PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.552e-26 Identity = 58/140 (41.43%), Postives = 90/140 (64.29%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP L IHQ+ E L M +W +N H SGL ++V S++TE +A Q+ F+ ++V + GNS+ D F+ ++MP+L F + +DVS++K LC W Sbjct: 17 ELNLVWLDMEMTGLDPDTDRIIEIAVVVTNSTLDIAVEGPVLAIHQSDETLAKMDDWNKNTHGRSGLIDRVRASSVTEADAAAQIAAFLAEHVPPGKSPMCGNSICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRW 156
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BURMS (Oligoribonuclease OS=Burkholderia mallei (strain SAVP1) GN=orn PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.552e-26 Identity = 58/140 (41.43%), Postives = 90/140 (64.29%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP L IHQ+ E L M +W +N H SGL ++V S++TE +A Q+ F+ ++V + GNS+ D F+ ++MP+L F + +DVS++K LC W Sbjct: 17 ELNLVWLDMEMTGLDPDTDRIIEIAVVVTNSTLDIAVEGPVLAIHQSDETLAKMDDWNKNTHGRSGLIDRVRASSVTEADAAAQIAAFLAEHVPPGKSPMCGNSICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRW 156
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BURMA (Oligoribonuclease OS=Burkholderia mallei GN=orn PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.552e-26 Identity = 58/140 (41.43%), Postives = 90/140 (64.29%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP L IHQ+ E L M +W +N H SGL ++V S++TE +A Q+ F+ ++V + GNS+ D F+ ++MP+L F + +DVS++K LC W Sbjct: 17 ELNLVWLDMEMTGLDPDTDRIIEIAVVVTNSTLDIAVEGPVLAIHQSDETLAKMDDWNKNTHGRSGLIDRVRASSVTEADAAAQIAAFLAEHVPPGKSPMCGNSICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRW 156
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BURM9 (Oligoribonuclease OS=Burkholderia mallei (strain NCTC 10229) GN=orn PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.552e-26 Identity = 58/140 (41.43%), Postives = 90/140 (64.29%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP L IHQ+ E L M +W +N H SGL ++V S++TE +A Q+ F+ ++V + GNS+ D F+ ++MP+L F + +DVS++K LC W Sbjct: 17 ELNLVWLDMEMTGLDPDTDRIIEIAVVVTNSTLDIAVEGPVLAIHQSDETLAKMDDWNKNTHGRSGLIDRVRASSVTEADAAAQIAAFLAEHVPPGKSPMCGNSICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRW 156
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BURM7 (Oligoribonuclease OS=Burkholderia mallei (strain NCTC 10247) GN=orn PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.552e-26 Identity = 58/140 (41.43%), Postives = 90/140 (64.29%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP L IHQ+ E L M +W +N H SGL ++V S++TE +A Q+ F+ ++V + GNS+ D F+ ++MP+L F + +DVS++K LC W Sbjct: 17 ELNLVWLDMEMTGLDPDTDRIIEIAVVVTNSTLDIAVEGPVLAIHQSDETLAKMDDWNKNTHGRSGLIDRVRASSVTEADAAAQIAAFLAEHVPPGKSPMCGNSICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRW 156
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_SHIFL (Oligoribonuclease OS=Shigella flexneri GN=orn PE=3 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 2.027e-26 Identity = 63/137 (45.99%), Postives = 84/137 (61.31%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H ASGL E+V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEVYFHYRYLDVSTLKELARRW 144 The following BLAST results are available for this feature:
BLAST of FC928203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928203 ID=FC928203; Name=FC928203; organism=Citrus clementina; type=EST; length=636bpback to top |