FC928203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_ECO57 (Oligoribonuclease OS=Escherichia coli O157:H7 GN=orn PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.647e-26 Identity = 63/137 (45.99%), Postives = 84/137 (61.31%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M W H ASGL E+V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDGWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_SHEDO (Oligoribonuclease OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=orn PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.457e-26 Identity = 61/137 (44.53%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL+ EVD ++EIA ++TD +L +GP + IHQ+ E L M +W Q HH SGL ++V S TE +A +Q ++F+ + V + GNS+ D FL KYM +L F + VDVS+IK L W Sbjct: 8 LIWIDLEMTGLEPEVDVVIEIATLVTDSELNILAQGPVIAIHQSDETLAKMDDWNQKHHGQSGLIDRVKASQFTEADAIEQTIKFLAQYVPKGASPMCGNSIGQDRRFLNKYMLELEEYFHYRNVDVSTIKELVKRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_PSE14 (Oligoribonuclease OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=orn PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.515e-26 Identity = 61/140 (43.57%), Postives = 85/140 (60.71%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 K L+WIDLEMTGL + D I+E+A IITD +L EGP + +HQ+ E L M EW H SGLT++V S ++ EAE Q +EF+K V + + GNS+ D FL ++MP L + F + +DVS++K L W Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTISMAEAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMPTLENWFHYRNLDVSTLKELAARW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_FRATN (Oligoribonuclease OS=Francisella tularensis subsp. novicida (strain U112) GN=orn PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.515e-26 Identity = 59/137 (43.07%), Postives = 87/137 (63.50%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL ++ +I+EIA IITD L E + IHQ+ E L+SM EWC H +GLT++V S ++ AE+Q++EF++K V + L GNS++ D FL KYMP + + ++DV+++K L W Sbjct: 7 LIWIDLEMTGLDVDSCKIIEIAAIITDKDLNIIAEAEPIAIHQSDEILNSMNEWCIKVHCETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCGNSIWQDRRFLAKYMPKIDEYCHYRMLDVTTLKLLNQYW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_SHEFN (Oligoribonuclease OS=Shewanella frigidimarina (strain NCIMB 400) GN=orn PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.896e-26 Identity = 58/137 (42.34%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+W+DLEMTGL+ +VDR++EIA ++TD +L +GP L I+QT E L M +W Q HH SGL ++V S +E++A Q ++F+ + V + GNS+ D FL KYM +L F + +DVS++K L W Sbjct: 8 LIWVDLEMTGLEPDVDRVIEIATLVTDQELNIIAQGPVLAIYQTDEVLAGMDDWNQKHHGESGLVDRVRASKCSEQDAIAQTIDFLAQYVPKGASPMCGNSIGQDRRFLNKYMLELEEFFHYRNIDVSTVKELVRRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_PSEU2 (Oligoribonuclease OS=Pseudomonas syringae pv. syringae (strain B728a) GN=orn PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.896e-26 Identity = 61/140 (43.57%), Postives = 85/140 (60.71%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 K L+WIDLEMTGL + D I+E+A IITD +L EGP + +HQ+ E L M EW H SGLT++V S ++ EAE Q +EF+K V + + GNS+ D FL ++MP L + F + +DVS++K L W Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTVSMAEAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMPTLENWFHYRNLDVSTLKELAARW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BORA1 (Oligoribonuclease OS=Bordetella avium (strain 197N) GN=orn PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.896e-26 Identity = 58/137 (42.34%), Postives = 88/137 (64.23%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 LVW+D+EMTGL E +RI+E+A ++T+ LT EGP LV+HQ+ L++M W ++ H SGL +KV S LTE +AE+Q+++F+ + V L GN++ D F+ YMP+L F + +DVS++K L W Sbjct: 8 LVWLDMEMTGLDPEKERIIEVAVVVTEPDLTVVAEGPVLVVHQSDSVLEAMDNWNKSTHGKSGLIDKVRASTLTEAQAEQQLIDFLSQYVPAGKSPLCGNTISQDRRFMFAYMPNLERFFHYRNLDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_THICR (Oligoribonuclease OS=Thiomicrospira crunogena (strain XCL-2) GN=orn PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.701e-26 Identity = 58/137 (42.34%), Postives = 83/137 (60.58%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL + D+I+EIA ++TD +L EGP + I + LD M WC HH SGLT++V S +T +AE++ ++F+K V + GNS+ D FL + MP+L F + +DVSS+K L W Sbjct: 7 LIWIDLEMTGLDHKADQIIEIATVVTDAELNVLAEGPVMAIQTEQHYLDGMDAWCTTHHGNSGLTKRVQESTITMAQAEQETIKFLKPYVPKGKSPMCGNSICQDRRFLIEQMPELEQFFHYRNLDVSSLKELARRW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_COXBU (Oligoribonuclease OS=Coxiella burnetii GN=orn PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.701e-26 Identity = 62/137 (45.26%), Postives = 83/137 (60.58%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+W+DLEMTGL E DRI+EIA I+T+ L EGP IHQ + L +M W +HH ASGL E+V +S++ E EAE + F++K V L GNSV D FL +YMP L F + +DV+++K L W Sbjct: 8 LIWLDLEMTGLDPERDRIIEIATIVTNSHLDILAEGPAFAIHQPDKLLTAMDNWNTSHHTASGLLERVKNSSVDEVEAETLTLAFLEKYVSAGKSPLCGNSVCQDRRFLSRYMPRLNQFFHYRHLDVTTLKILAQRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_ACISJ (Oligoribonuclease OS=Acidovorax sp. (strain JS42) GN=orn PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.006e-25 Identity = 62/155 (40.00%), Postives = 87/155 (56.13%), Query Frame = 2 Query: 167 LENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 + + N P + LVW+D EM+GL E +R+LEIA ++T LT VEGP IHQ LD M W + H SGL +KV S +TE +AE++++ F+ + V + GNS+ D FL KYMP L + F + VDVS++K L W Sbjct: 1 MSDTANPTVPALAKSDQNLVWLDCEMSGLNPETERLLEIAVVVTSADLTLRVEGPVFAIHQADAVLDGMDAWNKGTHGRSGLIDKVRASTVTEADAERELLAFLSRYVPKGVVPMCGNSIGQDRRFLVKYMPKLEAFFHYRNVDVSTLKELAKRW 155 The following BLAST results are available for this feature:
BLAST of FC928203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928203 ID=FC928203; Name=FC928203; organism=Citrus clementina; type=EST; length=636bpback to top |