FC928203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_ACIAC (Oligoribonuclease OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=orn PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.006e-25 Identity = 62/136 (45.59%), Postives = 82/136 (60.29%), Query Frame = 2 Query: 224 VWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 VW+D EMTGL E DR+LEIA ++T +L VEGP IHQ+ LD M W + H SGL EKV S +TE EAE+ ++EF+ + V + GNS+ D FL +YMP L + F + VDVS++K L W Sbjct: 21 VWLDCEMTGLDPEKDRLLEIAVVVTGPELEPRVEGPVFAIHQSDALLDGMDAWNKGTHGRSGLIEKVRASTVTEAEAEQAILEFLARYVRKGVAPMCGNSIGQDRRFLVRYMPKLEAFFHYRNVDVSTLKELSRRW 156
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_SHEON (Oligoribonuclease OS=Shewanella oneidensis GN=orn PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.314e-25 Identity = 60/137 (43.80%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL+ +VDR++EIA ++TD +L +GP + IHQ+ E L +M +W Q HH SGL E+V S + E EA Q + F+ + V + GNSV D FL +YM +L F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLEPDVDRVIEIATLVTDQELNIIGQGPVIAIHQSDEVLAAMDDWNQKHHGESGLIERVRASQVNEAEAVAQTIAFLAQYVPKGVSPMCGNSVGQDRRFLNRYMRELEDYFHYRNLDVSTVKELVKRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_IDILO (Oligoribonuclease OS=Idiomarina loihiensis GN=orn PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.716e-25 Identity = 56/140 (40.00%), Postives = 86/140 (61.43%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 K L+WIDLEMTGL+ + + I+E+A I+TD +L EGP + +HQ ++ LD M +W H SGL E+V S ER+A + +EF+++ + + GNS+ D FL K+MP+L + F + +DVS++K L W Sbjct: 7 KQRLIWIDLEMTGLEPDENHIIEVATIVTDAQLNTLAEGPVIAVHQPQKHLDRMDDWNVKTHTGSGLVERVKESQHDERKAAAETIEFLRQYIDAGVSPMCGNSICQDRRFLAKHMPELEAFFHYRNLDVSTLKELAKRW 146
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_CITK8 (Oligoribonuclease OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=orn PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.716e-25 Identity = 60/137 (43.80%), Postives = 83/137 (60.58%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H SGL ++V S+ +R AE +EF+K+ V + GNS+ D FL KYMP+L + F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSAEQLALMDDWNVRTHTGSGLVDRVKASSFDDRAAELATIEFLKEWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BORPE (Oligoribonuclease OS=Bordetella pertussis GN=orn PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.716e-25 Identity = 59/137 (43.07%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 LVW+D+EMTGL E +RI+E+A ++T+ LT EGP LV+HQ LD+M W ++ H SGL EKV S L E +AE+ ++EF+ ++V L GN++ D F+ YMP+L F + +DVS++K L W Sbjct: 8 LVWLDMEMTGLDPEKERIIEVAVVVTEADLTVVAEGPVLVVHQPDSLLDAMDNWNKSTHGKSGLIEKVKASTLGEAQAEQILLEFLAEHVPAGKSPLCGNTISQDRRFMYAYMPNLERFFHYRNLDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BORPA (Oligoribonuclease OS=Bordetella parapertussis GN=orn PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.716e-25 Identity = 59/137 (43.07%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 LVW+D+EMTGL E +RI+E+A ++T+ LT EGP LV+HQ LD+M W ++ H SGL EKV S L E +AE+ ++EF+ ++V L GN++ D F+ YMP+L F + +DVS++K L W Sbjct: 8 LVWLDMEMTGLDPEKERIIEVAVVVTEADLTVVAEGPVLVVHQPDSLLDAMDNWNKSTHGKSGLIEKVKASTLGEAQAEQILLEFLAEHVPAGKSPLCGNTISQDRRFMYAYMPNLERFFHYRNLDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_BORBR (Oligoribonuclease OS=Bordetella bronchiseptica GN=orn PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.716e-25 Identity = 59/137 (43.07%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 LVW+D+EMTGL E +RI+E+A ++T+ LT EGP LV+HQ LD+M W ++ H SGL EKV S L E +AE+ ++EF+ ++V L GN++ D F+ YMP+L F + +DVS++K L W Sbjct: 8 LVWLDMEMTGLDPEKERIIEVAVVVTEADLTVVAEGPVLVVHQPDSLLDAMDNWNKSTHGKSGLIEKVKASTLGEAQAEQILLEFLAEHVPAGKSPLCGNTISQDRRFMYAYMPNLERFFHYRNLDVSTLKELARRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_RHOSR (Oligoribonuclease OS=Rhodococcus sp. (strain RHA1) GN=orn PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.241e-25 Identity = 61/139 (43.88%), Postives = 90/139 (64.75%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWY 634 LVWID EMTGL++ D+++EIA ++TD +L EG D+VIH + L +M + HE SGLT++V S +T EAE+QV+ +++++V T LAGNS+ D F+ + MPDL + + ++DVSSIK L WY Sbjct: 5 LVWIDCEMTGLRLGTDKLIEIAALVTDSELNVLGEGVDIVIHADDDALAAMPDVVTKMHENSGLTDEVRKSTVTLAEAEQQVLAYIREHVPVAGTAPLAGNSIATDRGFIARDMPDLDTYLHYRMIDVSSIKELSRRWY 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_HAHCH (Oligoribonuclease OS=Hahella chejuensis (strain KCTC 2396) GN=orn PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.241e-25 Identity = 58/137 (42.34%), Postives = 84/137 (61.31%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL + DRI+E+A ++T L EGP + +HQ L M +W +N H ASGLT +V S + E +AEKQ+++F+ ++V + GNS+ D FL +YM DL F + +DVS++K L W Sbjct: 7 LIWIDLEMTGLDPDSDRIIEMAVVVTTSNLELVAEGPVIAVHQPDSVLALMDDWNRNTHGASGLTGRVKGSTIGEADAEKQILDFLAQHVDAGCSPMCGNSIGQDRRFLARYMKDLEKFFHYRNLDVSTLKELARRW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_AZOSB (Oligoribonuclease OS=Azoarcus sp. (strain BH72) GN=orn PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.241e-25 Identity = 56/137 (40.88%), Postives = 88/137 (64.23%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+W+D+EMTGL+ + DRI+EIA +ITD +L E P + +HQ + LD+M +W +N H SGL ++V S ++E EAE +++ F+++ V T + GNS+ D FL +YMP + F + +DVS++K L W Sbjct: 8 LIWLDMEMTGLEPDRDRIIEIALVITDSQLNTIAEAPVIAVHQPESVLDAMDDWNKNTHGKSGLIDRVRASTVSEAEAEARMLAFLQEWVPARTSPMCGNSICQDRRFLARYMPAFEAWFHYRNLDVSTLKELAKRW 144 The following BLAST results are available for this feature:
BLAST of FC928203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928203 ID=FC928203; Name=FC928203; organism=Citrus clementina; type=EST; length=636bpback to top |