FC928203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_SHESM (Oligoribonuclease OS=Shewanella sp. (strain MR-4) GN=orn PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 58/137 (42.34%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL+ +VDR++EIA ++TD +L +GP + IHQ+ E L +M +W Q HH SGL ++V S + E +A Q + F+++ V + GNSV D FL +YM +L F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLEPDVDRVIEIATLVTDQELNIIGQGPVIAIHQSDEVLAAMDDWNQKHHGESGLIDRVRASQVNEAQAVAQTIAFLEQYVPKGASPMCGNSVGQDRRFLNRYMRELEDYFHYRNLDVSTVKELVKRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_FRATW (Oligoribonuclease OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=orn PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL ++ +I+EIA IITD L E + I+Q E L +M EWC H +GLT++V S ++ AE+Q++EF++K V + L GNS++ D FL KYMP++ + ++DV+++K L W Sbjct: 7 LIWIDLEMTGLDVDSCKIIEIAAIITDKDLNIIAEAEPIAIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCGNSIWQDRRFLAKYMPNIDEYCHYRMLDVTTLKLLNQYW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_FRATO (Oligoribonuclease OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=orn PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL ++ +I+EIA IITD L E + I+Q E L +M EWC H +GLT++V S ++ AE+Q++EF++K V + L GNS++ D FL KYMP++ + ++DV+++K L W Sbjct: 7 LIWIDLEMTGLDVDSCKIIEIAAIITDKDLNIIAEAEPIAIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCGNSIWQDRRFLAKYMPNIDEYCHYRMLDVTTLKLLNQYW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_FRATH (Oligoribonuclease OS=Francisella tularensis subsp. holarctica (strain LVS) GN=orn PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL ++ +I+EIA IITD L E + I+Q E L +M EWC H +GLT++V S ++ AE+Q++EF++K V + L GNS++ D FL KYMP++ + ++DV+++K L W Sbjct: 7 LIWIDLEMTGLDVDSCKIIEIAAIITDKDLNIIAEAEPIAIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCGNSIWQDRRFLAKYMPNIDEYCHYRMLDVTTLKLLNQYW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_FRATF (Oligoribonuclease OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=orn PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL ++ +I+EIA IITD L E + I+Q E L +M EWC H +GLT++V S ++ AE+Q++EF++K V + L GNS++ D FL KYMP++ + ++DV+++K L W Sbjct: 7 LIWIDLEMTGLDVDSCKIIEIAAIITDKDLNIIAEAEPIAIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCGNSIWQDRRFLAKYMPNIDEYCHYRMLDVTTLKLLNQYW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_PSESM (Oligoribonuclease OS=Pseudomonas syringae pv. tomato GN=orn PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.992e-25 Identity = 59/140 (42.14%), Postives = 84/140 (60.00%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 K L+WIDLEMTGL + D I+E+A IITD +L EGP + +HQ+ E L M EW H SGLT++V S ++ +AE Q + F+K V + + GNS+ D FL ++MP L + F + +DVS++K L W Sbjct: 4 KQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTISMADAEAQTLAFIKLWVPERSSPICGNSICQDRRFLYRHMPALENYFHYRNLDVSTLKELAARW 143
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_METCA (Oligoribonuclease OS=Methylococcus capsulatus GN=orn PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.992e-25 Identity = 62/137 (45.26%), Postives = 82/137 (59.85%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL + D I+EIA I+TDG+L EGP L IHQ + LD M +W + H SGLTE+V S + E EAE + FV + V + GNS+ D FL + MP L + F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLDPQNDAIIEIATIVTDGQLNVLAEGPVLAIHQPESVLDRMDDWNRKQHGESGLTERVRRSTIGEAEAEHLTLGFVSEWVPPNESPICGNSICQDRRFLARCMPRLEAYFHYRNLDVSTLKILVERW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_SHESA (Oligoribonuclease OS=Shewanella sp. (strain ANA-3) GN=orn PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.519e-25 Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL+ +VDR++EIA ++TD +L +GP + IHQ+ + L +M +W Q HH SGL ++V S + E +A Q + F+++ V + GNSV D FL +YM +L F + +DVS++K L W Sbjct: 8 LIWIDLEMTGLEPDVDRVIEIATLVTDQELNIIGQGPVIAIHQSDDVLAAMDDWNQKHHGESGLIDRVRASQMNEAQAVAQTIAFLEQYVPKGASPMCGNSVGQDRRFLNRYMRELEDYFHYRNLDVSTVKELVKRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_SHEB8 (Oligoribonuclease OS=Shewanella baltica (strain OS185) GN=orn PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.519e-25 Identity = 59/137 (43.07%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL+ +VDRI+EIA ++TD +L +GP + IHQ+ + L +M +W Q HH SGL ++V S TE +A + + F+++ V + GNS+ D FL +YM +L F + VDVS+IK L W Sbjct: 8 LIWIDLEMTGLEPDVDRIIEIATLVTDQELNIIGQGPVIAIHQSDDVLAAMDDWNQKHHGESGLIDRVRASQETEAQAVAKTIAFLEQYVPKGASPMCGNSIGQDRRFLNRYMRELEDYFHYRNVDVSTIKELVKRW 144
BLAST of FC928203 vs. ExPASy Swiss-Prot
Match: ORN_SHEB5 (Oligoribonuclease OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=orn PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.519e-25 Identity = 59/137 (43.07%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL+ +VDRI+EIA ++TD +L +GP + IHQ+ + L +M +W Q HH SGL ++V S TE +A + + F+++ V + GNS+ D FL +YM +L F + VDVS+IK L W Sbjct: 8 LIWIDLEMTGLEPDVDRIIEIATLVTDQELNIIGQGPVIAIHQSDDVLAAMDDWNQKHHGESGLIDRVRASQETEAQAVAKTIAFLEQYVPKGASPMCGNSIGQDRRFLNRYMRELEDYFHYRNVDVSTIKELVKRW 144 The following BLAST results are available for this feature:
BLAST of FC928203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928203 ID=FC928203; Name=FC928203; organism=Citrus clementina; type=EST; length=636bpback to top |