FC928881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.412e-24 Identity = 41/86 (47.67%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATD V+SFKS +WFWMT P PSC +++ W+PS D R+PG+G TNI+NGG+ECG ++ V +RIG++ +CG G+ Sbjct: 210 VATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGV 295 HSP 2 Score: 30.0314 bits (66), Expect = 2.412e-24 Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPYGINLMAQSM 328 LG S GD+LDC QR +G L+ +M Sbjct: 293 LGVSPGDNLDCGNQRSFGNGLLVDTM 318
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.137e-24 Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATDPV+SFK+ LWFWMT P PSC +++I W PSS D RLPG+G TNI+NGG+ECG+ + V +RIG++ +C G+ Sbjct: 220 VATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGV 305 HSP 2 Score: 26.5646 bits (57), Expect = 3.137e-24 Identity = 11/26 (42.31%), Postives = 17/26 (65.38%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPYGINLMAQSM 328 LG + GD+LDC QR +G L+ ++ Sbjct: 303 LGVTPGDNLDCVNQRWFGNALLVDTL 328
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.142e-24 Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGIQH 264 +++DP +SFKS WFWMT P PSC ++I W PSS+D R GYG TNI+NGG+ECG+ NA V +RIG++ +C G+ + Sbjct: 194 LSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSY 281 HSP 2 Score: 31.187 bits (69), Expect = 3.142e-24 Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPYGINLMAQSM 328 LG S G++LDCY Q P+G + SM Sbjct: 277 LGVSYGNNLDCYNQSPFGNGVSVDSM 302
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.085e-24 Identity = 40/86 (46.51%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATD ++SFKS +WFWMT P PSC +++ W+PS D R+PG+G TNI+NGG+ECG ++ V +RIG++ +CG G+ Sbjct: 208 VATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGV 293 HSP 2 Score: 28.4906 bits (62), Expect = 4.085e-24 Identity = 12/26 (46.15%), Postives = 17/26 (65.38%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPYGINLMAQSM 328 LG S GD+LDC QR +G L+ ++ Sbjct: 291 LGVSPGDNLDCGNQRSFGNGLLVDTV 316
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.316e-24 Identity = 41/86 (47.67%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATD V+SFKS +WFWMT P PSC +++ W+PS D R+PG+G TNI+NGG+ECG ++ V +RIG++ +CG G+ Sbjct: 210 VATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGV 295 HSP 2 Score: 28.4906 bits (62), Expect = 5.316e-24 Identity = 12/26 (46.15%), Postives = 17/26 (65.38%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPYGINLMAQSM 328 LG S GD+LDC QR +G L+ ++ Sbjct: 293 LGVSPGDNLDCGNQRSFGNGLLVDTV 318
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.523e-23 Identity = 43/86 (50.00%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +AT+ V+SFKS +WFWMTA P PSC +++ W PS+ D RLPGYG TNI+NGG+ECG +A V +RIG++ +C G+ Sbjct: 226 VATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSDARVQDRIGFYRRYCSILGV 311 HSP 2 Score: 26.5646 bits (57), Expect = 1.523e-23 Identity = 10/26 (38.46%), Postives = 17/26 (65.38%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPYGINLMAQSM 328 LG S GD++DC Q+ + L+ ++M Sbjct: 309 LGVSPGDNIDCGNQKSFNSGLLLETM 334
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 1.524e-23 Identity = 38/88 (43.18%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGIQH 264 +A+D +SFK+ WFWMT P PSC ++ +W PS++D R+PGYG+ TNI+NGG+ECG + V +RIG++ +C G+ + Sbjct: 218 VASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSY 305 HSP 2 Score: 32.3426 bits (72), Expect = 1.524e-23 Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPY 301 LG S GD+LDCY QRPY Sbjct: 301 LGVSYGDNLDCYNQRPY 317
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.232e-23 Identity = 43/82 (52.44%), Postives = 61/82 (74.39%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCG 246 +ATDPV+SFKS +WFWMT P PSC +++I W+PS+ D RLPG+G TNI+NGG+ECG+ ++ V +RIG++ +CG Sbjct: 220 VATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLECGRGSDSRVQDRIGFYRRYCG 301
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.232e-23 Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATDP +SFKS WFWMT P PSC +++I W PS +D R+PG+G TNI+NGG+ECGQ NA V +RIG++ +C G+ Sbjct: 213 LATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGV 298
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.972e-23 Identity = 42/86 (48.84%), Postives = 60/86 (69.77%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATDPV+SFKS +WFWMT P PSC +++ W+PS D R+PG+G TNI+NGG+ECG ++ V +RIG++ +CG G+ Sbjct: 214 VATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGV 299 The following BLAST results are available for this feature:
BLAST of FC928881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928881 ID=FC928881; Name=FC928881; organism=Citrus clementina; type=EST; length=512bpback to top |