FC928881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.613e-26 Identity = 46/86 (53.49%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATDPV+SFK+ LWFWMT P PSC +++ W PSS D RLPGYG TNI+NGG+ECG+ ++ V +RIG++ +C FGI Sbjct: 208 VATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGI 293 HSP 2 Score: 32.3426 bits (72), Expect = 1.613e-26 Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = 2 Query: 254 GFSTGDSLDCYYQRPYGINLMAQSM 328 G GD+LDCY QRP+G +L S+ Sbjct: 292 GIGYGDNLDCYSQRPFGSSLPLSSI 316
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.731e-26 Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATD V+SFKS LWFWMTA P PS +++ W PSS DV RRLPGYG TNI+NGG+ECG+ ++ V +RIG+F +C G+ Sbjct: 216 VATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGV 301 HSP 2 Score: 30.0314 bits (66), Expect = 2.731e-26 Identity = 12/30 (40.00%), Postives = 20/30 (66.67%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPYGINLMAQSM*SSR 340 LG G++LDCY Q P+G +L+ + +S+ Sbjct: 299 LGVGYGNNLDCYSQTPFGNSLLLSDLVTSQ 328
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 4.628e-26 Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATD V+SFKS LWFWMTA P PS +++ W PSS DV RRLPGYG TNI+NGG+ECG+ ++ V +RIG+F +C G+ Sbjct: 215 VATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGV 300 HSP 2 Score: 29.261 bits (64), Expect = 4.628e-26 Identity = 12/30 (40.00%), Postives = 19/30 (63.33%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPYGINLMAQSM*SSR 340 LG G++LDCY Q P+G +L + +S+ Sbjct: 298 LGVGYGNNLDCYSQTPFGNSLFLSDLVTSQ 327
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 4.629e-26 Identity = 45/86 (52.33%), Postives = 62/86 (72.09%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATDPV+SFKS LWFWMT P PSC +++I W+PSS D RLPG+G TNI+NGG+ECG+ ++ V +RIG++ +C G+ Sbjct: 216 VATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGV 301 HSP 2 Score: 30.0314 bits (66), Expect = 4.629e-26 Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPYGINLMAQSM 328 LG S GD+LDC QR +G L+ +M Sbjct: 299 LGVSPGDNLDCGNQRSFGNGLLVDTM 324
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.658e-26 Identity = 45/86 (52.33%), Postives = 60/86 (69.77%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATD VLSFK+ LWFWMT P PSC ++L W+PS+ D RLPGYG TN++NGG+ECG+ N V +R+G+F +CG G+ Sbjct: 143 VATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGV 228 HSP 2 Score: 32.3426 bits (72), Expect = 4.658e-26 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPYG 304 LG TG++LDCY QRP+G Sbjct: 226 LGVGTGNNLDCYNQRPFG 243
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 6.023e-26 Identity = 44/86 (51.16%), Postives = 62/86 (72.09%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATDPV+SFKS LWFWMT P PSC +++I W+PS+ D RLPG+G TNI+NGG+ECG+ ++ V +RIG++ +C G+ Sbjct: 221 VATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGV 306 HSP 2 Score: 30.0314 bits (66), Expect = 6.023e-26 Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPYGINLMAQSM 328 LG S GD+LDC QR +G L+ +M Sbjct: 304 LGVSPGDNLDCGNQRSFGNGLLVDTM 329
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 7.854e-26 Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRG-NAAVHNRIGYFTTFCGKFG 255 + TDP ++FK+ LWFWMT P PSC ++ + W PS+ D + R+PGYG TNI+NGGIECGQ G N A NRIG++ T+C G Sbjct: 192 VETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLG 277 HSP 2 Score: 33.113 bits (74), Expect = 7.854e-26 Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 2 Query: 248 SLGFSTGDSLDCYYQRPYGINLM 316 SLG + G +LDCY QRP+G L+ Sbjct: 275 SLGTTYGSNLDCYQQRPFGYGLL 297
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.251e-25 Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGIQH 264 +++DP +SFKS WFWMT P PSC ++I W PSS+D R+PGYG TNI+NGG+ECG+ NA V +RIG++ +C G+ + Sbjct: 216 LSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSY 303 HSP 2 Score: 31.187 bits (69), Expect = 2.251e-25 Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPYGINLMAQSM 328 LG S G++LDCY Q P+G + SM Sbjct: 299 LGVSYGNNLDCYNQSPFGNGVSVDSM 324
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 4.957e-25 Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRG-NAAVHNRIGYFTTFCGKFG 255 + TDPV+SFK+ +WFWM P PSC ++ W PS+ D++ R+PGYG TNI+NGGIECGQ G NAA +RIG++ +C G Sbjct: 229 VETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLG 314 HSP 2 Score: 32.3426 bits (72), Expect = 4.957e-25 Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 2 Query: 248 SLGFSTGDSLDCYYQRPYGINL 313 SLG + G +LDCY QRP+G L Sbjct: 312 SLGTTYGSNLDCYQQRPFGYGL 333
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.093e-24 Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +A+DPV+SFK+ LWFWMT P PSC +++ +W PSS D+ R+PGYG TNI+NGG+ECG + V NRIG++ +C GI Sbjct: 227 VASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGI 312 HSP 2 Score: 28.8758 bits (63), Expect = 1.093e-24 Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPYGINLMA 319 LG G +LDCY QRP+ L A Sbjct: 310 LGIGYGSNLDCYDQRPFNSGLTA 332 The following BLAST results are available for this feature:
BLAST of FC928881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928881 ID=FC928881; Name=FC928881; organism=Citrus clementina; type=EST; length=512bpback to top |