FC928881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.521e-21 Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATD +SFK+ +WFWMT PS +++I W PS+ D R PG G TNI+NGGIECG NAAV +RIGY+ +CG + Sbjct: 151 VATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNV 236 HSP 2 Score: 24.2534 bits (51), Expect = 6.521e-21 Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPY 301 L + GD+LDCY QR + Sbjct: 234 LNVAPGDNLDCYNQRNF 250
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.526e-21 Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFC 243 +ATD +SFK+ +WFWMTA PSC +++ +W PS+ D R PGYG TNI+NGGIECG+ N V +RIG++ +C Sbjct: 145 VATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYC 225 HSP 2 Score: 23.8682 bits (50), Expect = 6.526e-21 Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPY 301 L + GD+LDCY QR + Sbjct: 228 LNVAPGDNLDCYDQRNF 244
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 8.483e-21 Identity = 40/77 (51.95%), Postives = 53/77 (68.83%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYF 231 +ATD +SFK+ +WFWMT PSC +++ W PS+ D R+PGYG TNI+NGGIECG+ NA V +RIGY+ Sbjct: 152 VATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYY 228 HSP 2 Score: 25.409 bits (54), Expect = 8.483e-21 Identity = 10/27 (37.04%), Postives = 17/27 (62.96%), Query Frame = 2 Query: 221 LGTLPLSVASLGFSTGDSLDCYYQRPY 301 +G +V+ + + GD+LDCY QR + Sbjct: 225 IGYYRRNVSIMNVAPGDNLDCYNQRNF 251
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.768e-20 Identity = 42/86 (48.84%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATD +SFK+ +WFWMT PS +++I W PS+ D R+PGYG TNI+NGGIECG N AV +RIGY+ +CG + Sbjct: 151 VATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNV 236
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.856e-20 Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFC 243 +ATDP +SFK+ +WFWMTA P PS ++ +W PS D R+PG+G TNIVNGGIECG ++ V +RIG++ +C Sbjct: 221 VATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYC 301 HSP 2 Score: 24.6386 bits (52), Expect = 1.856e-20 Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 266 GDSLDCYYQRPY 301 G++LDCY QRP+ Sbjct: 309 GNNLDCYNQRPF 320
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.309e-20 Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFG 255 ++TD V+SFK+ +WFWMTA PSC ++++ W PS+ D R+PGYG TNI+NGGIECG N A +RIGY+ +C G Sbjct: 160 VSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLG 244
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.142e-20 Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFC 243 +ATD V+SFK+ WFWMT P PSC ++ W PS D RLPG+G TNI+NGG+ECG+ V +RIG++ +C Sbjct: 206 VATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYC 286 HSP 2 Score: 26.5646 bits (57), Expect = 3.142e-20 Identity = 11/26 (42.31%), Postives = 17/26 (65.38%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPYGINLMAQSM 328 L S G++LDC QRP+G L+ ++ Sbjct: 289 LRVSYGNNLDCNNQRPFGSGLLLDTI 314
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 5.311e-20 Identity = 37/88 (42.05%), Postives = 55/88 (62.50%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGIQH 264 +A+D +SF + WFWMT P PSC + +W PS++D R+PGYG TNI+NGG+ECG + V +RIG++ +C G+ + Sbjct: 225 VASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSY 312 HSP 2 Score: 27.335 bits (59), Expect = 5.311e-20 Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPYG 304 LG S +LDCY QRP+G Sbjct: 308 LGVSYDANLDCYSQRPFG 325
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 8.776e-20 Identity = 38/87 (43.68%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQ-RGNAAVHNRIGYFTTFCGKFGI 258 +++DPV++F++ +WFWMTA P PSC +++ ++W PS +D RLPGYG TNI+NGG ECG+ +R+GY+ +C F + Sbjct: 153 VSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRV 239
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.162e-18 Identity = 37/86 (43.02%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 ++T+P +SFK+ +WFWMT PS +++ W PS+ D R+PGYG TNI+NGGIECG + V +R+G++ +C FG+ Sbjct: 220 LSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGV 305 The following BLAST results are available for this feature:
BLAST of FC928881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928881 ID=FC928881; Name=FC928881; organism=Citrus clementina; type=EST; length=512bpback to top |