FC928881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.636e-18 Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 1 Query: 19 LSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 ++F++ LWFWMT PSC ++++ E++P DV R G+G TNIVNGG+EC + G+A V+NRIG++ +C G+ Sbjct: 197 IAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGV 276 HSP 2 Score: 23.8682 bits (50), Expect = 4.636e-18 Identity = 8/17 (47.06%), Postives = 12/17 (70.59%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPY 301 LG G +LDC +Q+P+ Sbjct: 274 LGVDVGPNLDCEHQQPF 290
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.076e-17 Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPP-IPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFC 243 +ATDPVLSF++ LWFWM PSC E++ EW PS D++ R PG+G TNI+ G EC + G NRI Y+ +C Sbjct: 204 VATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYC 285
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 8.423e-17 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYF 231 + +D + FK+ LWFWMT P PS +++ W PSS D R+PGYG TNI++GG+ECG+ + V +RIGY+ Sbjct: 111 VTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYY 187 HSP 2 Score: 23.0978 bits (48), Expect = 8.423e-17 Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = 2 Query: 269 DSLDCYYQRPY 301 D+LDCY Q+P+ Sbjct: 189 DNLDCYNQKPF 199
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.227e-13 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPI-PSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIEC-GQRGNAAVHNRIGYFTTFCGKFGI 258 +ATDP ++FK+ LW WMTA P PS ++ +W P+ D R PGYG TTNI+ GG++C G G A +R+ ++ +C G+ Sbjct: 231 VATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA---DRVAFYKRYCDVLGV 315
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.227e-13 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPI-PSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIEC-GQRGNAAVHNRIGYFTTFCGKFGI 258 +ATDP ++FK+ LW WMTA P PS ++ +W P+ D R PGYG TTNI+ GG++C G G A +R+ ++ +C G+ Sbjct: 231 VATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA---DRVAFYKRYCDVLGV 315 The following BLAST results are available for this feature:
BLAST of FC928881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928881 ID=FC928881; Name=FC928881; organism=Citrus clementina; type=EST; length=512bpback to top |