FC928937

Overview
NameFC928937
Unique NameFC928937
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length367
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC928937 vs. ExPASy Swiss-Prot
Match: ILL5_ARATH (IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 2.014e-40
Identity = 75/121 (61.98%), Postives = 95/121 (78.51%), Query Frame = 3
Query:    3 HLLNPCPVRFXXXXXXXXXXXDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 365
            HLLN C +              IPK  L+ AKR++   WM+GIRR+IH+NPELGY+E ETS+L+++ELDKMG+ YK+PVAVTGV+G++GTG  PFVALRADMD+LP+QEMVEWE+KSKIPG
Sbjct:   14 HLLNSCLIS-----CSSNDLSQIPKNFLSLAKREDFFDWMVGIRRRIHENPELGYEEVETSKLVKTELDKMGVSYKNPVAVTGVIGYVGTGHAPFVALRADMDALPIQEMVEWEHKSKIPG 129          
BLAST of FC928937 vs. ExPASy Swiss-Prot
Match: ILL4_ARATH (IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 6.480e-39
Identity = 74/121 (61.16%), Postives = 92/121 (76.03%), Query Frame = 3
Query:    3 HLLNPCPVRFXXXXXXXXXXXDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 365
            HLLNP  +              IP K L  AKR +   WM+GIRR+IH+NPELGY+E ETS+L+R+EL+KMG+ YK+PVAVTGVVG++GTG  PFVALRADMD+L +QEMVEWE+KSK+PG
Sbjct:   14 HLLNPTLIS-----CSSNGLSQIPSKFLTLAKRNDFFDWMVGIRRRIHENPELGYEEVETSKLVRAELEKMGVSYKYPVAVTGVVGYVGTGHAPFVALRADMDALAMQEMVEWEHKSKVPG 129          
BLAST of FC928937 vs. ExPASy Swiss-Prot
Match: ILL2_ARATH (IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 7.164e-38
Identity = 72/99 (72.73%), Postives = 87/99 (87.88%), Query Frame = 3
Query:   69 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 365
            I  KLL FAK  E+  WM+ IRRKIH+NPELGY+E ETS+LIRSEL+ +GIKY++PVA+TGV+G+IGTGEPPFVALRADMD+LP+QE VEWE+KSKI G
Sbjct:   34 IQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAG 132          
BLAST of FC928937 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSJ (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.034e-36
Identity = 68/100 (68.00%), Postives = 82/100 (82.00%), Query Frame = 3
Query:   66 DIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 365
            D P  LL  AK  E  GWM+G+RR+IH+NPELGY+EF TS+L+R ELD +GI Y+HP AVTGVV  +GTG PPFVALRADMD+LP+QE VEWE+KSK+PG
Sbjct:   31 DDPAGLLRRAKEAEFAGWMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHPFAVTGVVATVGTGGPPFVALRADMDALPMQESVEWEHKSKVPG 130          
BLAST of FC928937 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSI (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.034e-36
Identity = 68/100 (68.00%), Postives = 82/100 (82.00%), Query Frame = 3
Query:   66 DIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 365
            D P  LL  AK  E  GWM+G+RR+IH+NPELGY+EF TS+L+R ELD +GI Y+HP AVTGVV  +GTG PPFVALRADMD+LP+QE VEWE+KSK+PG
Sbjct:   31 DDPAGLLRRAKEAEFAGWMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHPFAVTGVVATVGTGGPPFVALRADMDALPMQESVEWEHKSKVPG 130          
BLAST of FC928937 vs. ExPASy Swiss-Prot
Match: ILL1_ARATH (IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsis thaliana GN=ILL1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.144e-35
Identity = 68/99 (68.69%), Postives = 83/99 (83.84%), Query Frame = 3
Query:   69 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 365
            IP   L  AK  E+   M+ IRRKIH+NPELGY+EFETS+ IRSELD +G+KY+ PVA+TG++G+IGTGEPPFVALRADMD+LP+QE VEWE+KSK PG
Sbjct:   33 IPINFLELAKSPEVFDSMVRIRRKIHENPELGYEEFETSKFIRSELDLIGVKYRFPVAITGIIGYIGTGEPPFVALRADMDALPIQEAVEWEHKSKNPG 131          
BLAST of FC928937 vs. ExPASy Swiss-Prot
Match: ILR1_ARATH (IAA-amino acid hydrolase ILR1 OS=Arabidopsis thaliana GN=ILR1 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 1.890e-30
Identity = 61/99 (61.62%), Postives = 77/99 (77.78%), Query Frame = 3
Query:   69 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 365
            + + +L+ AK  E   WM GIRRKIH+NPE G+QEF+TSQL+R ELD +G+KYK+PVA TGVV +IG+   P   LRADMD+LPLQE+VEWE KSK+ G
Sbjct:   35 LARGMLHSAKDPEFFEWMRGIRRKIHENPETGFQEFKTSQLVRDELDSLGVKYKYPVAKTGVVAWIGSCSKPVFGLRADMDALPLQELVEWESKSKVDG 133          
BLAST of FC928937 vs. ExPASy Swiss-Prot
Match: ILL2_ORYSJ (IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.210e-30
Identity = 57/93 (61.29%), Postives = 75/93 (80.65%), Query Frame = 3
Query:   81 LLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKI 359
            +L+ A+R E   WM G+R  IH+ PEL ++E ETS+L+R+ELD MG+ Y+HPVA TGVV  +GTG PPFVALRADMD+LP+QE V+WE+KSK+
Sbjct:   50 VLDRARRPEFAAWMAGVRWAIHERPELAFEEIETSRLVRAELDAMGVAYRHPVAGTGVVATVGTGRPPFVALRADMDALPMQEEVQWEHKSKV 142          
BLAST of FC928937 vs. ExPASy Swiss-Prot
Match: ILL6_ORYSJ (IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sativa subsp. japonica GN=ILL6 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.225e-29
Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 3
Query:   75 KKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 365
            +++   A R E   W+  +RR+IH+ PEL Y+E ETS+L+R ELD MG+ ++HPVA TGVV  IGTG PP VALRADMD+LP+QE VEWE+KSK PG
Sbjct:   97 EEIAGMAGRPETAAWLRAVRRRIHERPELAYEEVETSRLVRDELDAMGVGFRHPVARTGVVANIGTGRPPVVALRADMDALPIQEAVEWEHKSKNPG 193          
BLAST of FC928937 vs. ExPASy Swiss-Prot
Match: ILL6_ARATH (IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana GN=ILL6 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 5.146e-28
Identity = 54/96 (56.25%), Postives = 77/96 (80.21%), Query Frame = 3
Query:   78 KLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPG 365
            ++L    + + V W+  +RR IH+NPEL ++E+ETS+LIRSELD+MGI Y++P+A TG+  +IG+G PPFVA+RADMD+LP+QE VEWE+ SK+ G
Sbjct:   75 EILRLTYQPDNVAWLKRVRRTIHENPELAFEEYETSRLIRSELDRMGIMYRYPLAKTGIRAWIGSGGPPFVAVRADMDALPIQEAVEWEHISKVAG 170          
The following BLAST results are available for this feature:
BLAST of FC928937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
ILL5_ARATH2.014e-4061.98IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsi... [more]
ILL4_ARATH6.480e-3961.16IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsi... [more]
ILL2_ARATH7.164e-3872.73IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsi... [more]
ILL1_ORYSJ1.034e-3668.00IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL1_ORYSI1.034e-3668.00IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL1_ARATH1.144e-3568.69IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsi... [more]
ILR1_ARATH1.890e-3061.62IAA-amino acid hydrolase ILR1 OS=Arabidopsis thali... [more]
ILL2_ORYSJ4.210e-3061.29IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sati... [more]
ILL6_ORYSJ1.225e-2959.79IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sati... [more]
ILL6_ARATH5.146e-2856.25IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BC04RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BC04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928937 ID=FC928937; Name=FC928937; organism=Citrus clementina; type=EST; length=367bp
TTCATTTGCTCAATCCATGTCCTGTTAGATTCTCGTATGGCTCTTCAAGC
TCAAATGGGTTATCGGATATTCCAAAAAAGTTGCTTAATTTTGCAAAAAG
ACAAGAGCTTGTTGGCTGGATGATTGGTATCAGGAGAAAAATACATCAGA
ATCCAGAACTGGGCTATCAGGAATTTGAGACTAGTCAGCTTATTAGATCA
GAATTGGATAAAATGGGTATTAAATACAAACACCCGGTAGCAGTAACTGG
TGTTGTTGGTTTTATTGGGACTGGTGAGCCTCCTTTTGTTGCATTGAGAG
CAGATATGGATTCTCTTCCTCTGCAGGAAATGGTTGAGTGGGAGTACAAG
AGTAAAATTCCTGGGAA
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