FC929069
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_YEAST (60S ribosomal protein L32 OS=Saccharomyces cerevisiae GN=RPL32 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.261e-26 Identity = 60/108 (55.56%), Postives = 73/108 (67.59%), Query Frame = -1 Query: 266 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARL 589 R SDR V ENWR+ KGIDS VRR+F+G + P IGYGS+KKT+ P+G K F+V NV +LE L MH +TY AEIAHN+S K R I+ RA L + VTN RL Sbjct: 19 RHHSDRYHRVAENWRKQKGIDSVVRRRFRGNISQPKIGYGSNKKTKFLSPSGHKTFLVANVKDLETLTMHTKTYAAEIAHNISAKNRVVILARAKALGIKVTNPKGRL 126
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_CANAL (60S ribosomal protein L32 OS=Candida albicans GN=RPL32 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.239e-25 Identity = 57/108 (52.78%), Postives = 78/108 (72.22%), Query Frame = -1 Query: 266 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARL 589 R SDR V ENWR+ KGIDS VRR+F+G + PNIGYGS+KKT+ P G+K ++V NV +L+ L++H ++Y AEIA +VS++KR EIV +A +L V VTN +L Sbjct: 20 RHHSDRYHRVAENWRKQKGIDSCVRRRFRGTIPQPNIGYGSNKKTKFLNPAGYKVYLVKNVKDLDVLLLHTKSYAAEIASSVSSRKRVEIVAKAKKLGVKVTNPKGKL 127
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_CANGA (60S ribosomal protein L32 OS=Candida glabrata GN=RPL32 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.049e-24 Identity = 58/108 (53.70%), Postives = 73/108 (67.59%), Query Frame = -1 Query: 266 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARL 589 R SDR V ENWR+ KGIDS VRR+F+G + P IGYGS+KKT+ P+G K +V N+ +LE L MH ++Y AEIAHNVS+K R ++ RA L V VTN RL Sbjct: 20 RHHSDRYHRVSENWRKQKGIDSVVRRRFRGNISEPTIGYGSNKKTKFMSPSGHKVVLVSNLKDLETLTMHTKSYAAEIAHNVSSKNRVTLLARAKALGVKVTNAKGRL 127
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_ENCCU (60S ribosomal protein L32 OS=Encephalitozoon cuniculi GN=RPL32 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.312e-22 Identity = 56/114 (49.12%), Postives = 71/114 (62.28%), Query Frame = -1 Query: 248 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLGSQEEE 589 R SDR VK +WRRP GIDS+VR++ KG MP+I Y K+ RH LPNG +K + N+N+L L NR YC EIAH V +KR IV RA +L + + N ARL + EE Sbjct: 26 RHHSDRYKRVKPSWRRPHGIDSKVRKRCKGEREMPSIKYKKPKEIRHLLPNGLRKVRIFNINDLTPLTSLNRFYCGEIAHAVGARKRIAIVNRAKELGICLLNGNARLIPEIEE 139
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_PYRFU (50S ribosomal protein L32e OS=Pyrococcus furiosus GN=rpl32e PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.518e-15 Identity = 44/90 (48.89%), Postives = 58/90 (64.44%), Query Frame = -1 Query: 281 WRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 550 WRRPKGIDS++R K KG P+IG+ S K R P+G+++ +VHNV ELE L + A IAH V KKR EI++RA +L + V N Sbjct: 40 WRRPKGIDSKMRLKLKGKPRSPSIGWSSPKLVRGLHPSGYEEVLVHNVKELEAL--DPKRQAARIAHTVGKKKRIEIIKRAEELGIKVLN 127
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_PYRHO (50S ribosomal protein L32e OS=Pyrococcus horikoshii GN=rpl32e PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.418e-15 Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = -1 Query: 281 WRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 550 WRRPKGIDS++R K KG P+IG+ S + R P+G+++ ++HNV ELE + R A IAH V KKR EI++RA +L + V N Sbjct: 40 WRRPKGIDSKMRLKLKGKPRSPSIGWSSPRLVRGLHPSGYEEVLIHNVKELE--RLDPRRQAARIAHTVGKKKRIEILKRAEELGIKVLN 127
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_METKA (50S ribosomal protein L32e OS=Methanopyrus kandleri GN=rpl32 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.769e-15 Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = -1 Query: 281 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 589 R + R + E WRRPKG S++RRK K MPN GYGS KK R P+G+++ +V+N +LE + + A IA V +KR+EI+E+A +L +VV N Sbjct: 30 RQEWHRYKKLGEKWRRPKGRHSKMRRKLKSKPKMPNPGYGSPKKVRGLHPSGYEEVLVYNPKDLE--KIDPKRQAARIASRVGRRKRQEILEKAEELGIVVLN 130
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_PYRAB (50S ribosomal protein L32e OS=Pyrococcus abyssi GN=rpl32e PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15 Identity = 41/90 (45.56%), Postives = 58/90 (64.44%), Query Frame = -1 Query: 281 WRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 550 WRRPKGIDS++R K KG P+IG+ S + R P+G+++ ++HNV ELE + + A IAH V KKR EI++RA +L + V N Sbjct: 40 WRRPKGIDSKMRLKLKGKPRSPSIGWSSPRLVRGLHPSGYEEVLIHNVKELE--KLDPKRQAARIAHTVGKKKRIEILKRAQELGIKVLN 127
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_TRIHA (60S ribosomal protein L32 OS=Trichoderma harzianum GN=rpl32 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.285e-14 Identity = 45/91 (49.45%), Postives = 55/91 (60.44%), Query Frame = -1 Query: 329 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFL----MMHNRTYCAEIAHNVSTKKR 589 R QSDR V +WR+PKGID RVRR+F+G + MP IGYGS+KKTR P+G F +HN L M AEIA VS++KR Sbjct: 20 RHQSDRFDRVGSSWRKPKGIDGRVRRRFRGTIRMPKIGYGSNKKTRFLTPSGHNAF-LHNARTLSCAAGCSMQSTDPSAAEIATPVSSRKR 109
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_THESM (50S ribosomal protein L32e OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl32e PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13 Identity = 38/90 (42.22%), Postives = 57/90 (63.33%), Query Frame = -1 Query: 281 WRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 550 WR+PKG DS++R K KG P+IG+ S K R P+G+++ +V+NV +LE ++ ++ A IA V KKR I+ERA +L + V N Sbjct: 38 WRKPKGTDSKMRVKLKGKARSPSIGWSSPKAVRGLHPSGYEEVLVYNVKDLE--LIDSKRQAARIAATVGKKKRIMIIERARELGIKVLN 125 The following BLAST results are available for this feature:
BLAST of FC929069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929069 ID=FC929069; Name=FC929069; organism=Citrus clementina; type=EST; length=712bpback to top |