FC929069
|
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL321_ARATH (60S ribosomal protein L32-1 OS=Arabidopsis thaliana GN=RPL32A PE=2 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 2.167e-54 Identity = 104/133 (78.20%), Postives = 112/133 (84.21%), Query Frame = -1 Query: 248 MAVPXXXXXXXXXXXXXXKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLGSQEEE 646
MAVP RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG LMPN+GYGSDKKTRHYLPNGFKKFVVHN +ELE LMMHNRTYCAEIAHNVSTKKRK IVERA+QLDVVVTN+LARL SQE+E
Sbjct: 1 MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGSDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVVTNRLARLRSQEDE 133
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL322_ARATH (60S ribosomal protein L32-2 OS=Arabidopsis thaliana GN=RPL32B PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.405e-53 Identity = 101/133 (75.94%), Postives = 111/133 (83.46%), Query Frame = -1 Query: 248 MAVPXXXXXXXXXXXXXXKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLGSQEEE 646
MAVP RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG LMPN+GYGSDKKTRHYLPNGFKKF+VHN +ELE LMMHNRTYCAEIAHN+STKKRK IVERA+QLDVVV+NKL RL SQE+E
Sbjct: 1 MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGSDKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVVSNKLGRLRSQEDE 133
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_RAT (60S ribosomal protein L32 OS=Rattus norvegicus GN=Rpl32 PE=1 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 3.589e-41 Identity = 79/114 (69.30%), Postives = 97/114 (85.09%), Query Frame = -1 Query: 248 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLGSQEEE 589
R QSDR + +K NWR+P+GID+RVRR+FKG +LMPNIGYGS+KKT+H LP+GF+KF+VHNV ELE L+M N++YCAEIAHNVS+K RK IVERAAQL + VTN ARL S+E E
Sbjct: 22 RHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_PIG (60S ribosomal protein L32 OS=Sus scrofa GN=RPL32 PE=2 SV=3) HSP 1 Score: 168.318 bits (425), Expect = 3.589e-41 Identity = 79/114 (69.30%), Postives = 97/114 (85.09%), Query Frame = -1 Query: 248 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLGSQEEE 589
R QSDR + +K NWR+P+GID+RVRR+FKG +LMPNIGYGS+KKT+H LP+GF+KF+VHNV ELE L+M N++YCAEIAHNVS+K RK IVERAAQL + VTN ARL S+E E
Sbjct: 22 RHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_MOUSE (60S ribosomal protein L32 OS=Mus musculus GN=Rpl32 PE=2 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 3.589e-41 Identity = 79/114 (69.30%), Postives = 97/114 (85.09%), Query Frame = -1 Query: 248 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLGSQEEE 589
R QSDR + +K NWR+P+GID+RVRR+FKG +LMPNIGYGS+KKT+H LP+GF+KF+VHNV ELE L+M N++YCAEIAHNVS+K RK IVERAAQL + VTN ARL S+E E
Sbjct: 22 RHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_MACFA (60S ribosomal protein L32 OS=Macaca fascicularis GN=RPL32 PE=2 SV=3) HSP 1 Score: 168.318 bits (425), Expect = 3.589e-41 Identity = 79/114 (69.30%), Postives = 97/114 (85.09%), Query Frame = -1 Query: 248 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLGSQEEE 589
R QSDR + +K NWR+P+GID+RVRR+FKG +LMPNIGYGS+KKT+H LP+GF+KF+VHNV ELE L+M N++YCAEIAHNVS+K RK IVERAAQL + VTN ARL S+E E
Sbjct: 22 RHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_HUMAN (60S ribosomal protein L32 OS=Homo sapiens GN=RPL32 PE=1 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 3.589e-41 Identity = 79/114 (69.30%), Postives = 97/114 (85.09%), Query Frame = -1 Query: 248 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLGSQEEE 589
R QSDR + +K NWR+P+GID+RVRR+FKG +LMPNIGYGS+KKT+H LP+GF+KF+VHNV ELE L+M N++YCAEIAHNVS+K RK IVERAAQL + VTN ARL S+E E
Sbjct: 22 RHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_SPOFR (60S ribosomal protein L32 OS=Spodoptera frugiperda GN=RpL32 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.687e-41 Identity = 82/114 (71.93%), Postives = 92/114 (80.70%), Query Frame = -1 Query: 248 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLGSQEEE 589
R QSDR +K NWR+P+GID+RVRR+FKG LMPNIGYGS+KKTRH LPNGF+K +VHNV ELE LMM NR YCAEIAH VS+KKRK IVERA QL + VTN ARL SQE E
Sbjct: 21 RHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKTIVERAQQLSIRVTNSAARLRSQENE 134
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_BOVIN (60S ribosomal protein L32 OS=Bos taurus GN=RPL32 PE=2 SV=3) HSP 1 Score: 167.933 bits (424), Expect = 4.687e-41 Identity = 78/114 (68.42%), Postives = 97/114 (85.09%), Query Frame = -1 Query: 248 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLGSQEEE 589
R QSDR + +K NWR+P+GID+RVRR+FKG +LMPNIGYGS+KKT+H LP+GF+KF+VHNV ELE L+M N++YCAEIAHNVS+K RK IVERAAQL + +TN ARL S+E E
Sbjct: 22 RHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRITNPNARLRSEENE 135
BLAST of FC929069 vs. ExPASy Swiss-Prot
Match: RL32_ICTPU (60S ribosomal protein L32 OS=Ictalurus punctatus GN=rpl32 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40 Identity = 78/114 (68.42%), Postives = 95/114 (83.33%), Query Frame = -1 Query: 248 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELEFLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLGSQEEE 589
R QSDR + ++ NWR+P+GID+RVR FKG +LMPNIGYGS+KKT+H LP+GFKKF+VHNV ELE L+M N++YCAEIAHNVS+K RK IVERAAQL + VTN ARL S+E E
Sbjct: 22 RHQSDRYVKIRRNWRKPRGIDNRVRSGFKGQMLMPNIGYGSNKKTKHMLPSGFKKFLVHNVKELEVLLMSNKSYCAEIAHNVSSKNRKVIVERAAQLAIKVTNPNARLRSEENE 135 The following BLAST results are available for this feature:
BLAST of FC929069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51 ZOOMx 1POSITION0
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929069 ID=FC929069; Name=FC929069; organism=Citrus clementina; type=EST; length=712bpback to top |