FC929822 | Citrus Genome Database

Homology

BLAST of FC929822 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.896e-69
Identity = 118/192 (61.46%), Postives = 142/192 (73.96%), Query Frame = 1

Query:   22 EREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYG 585
            +RE+AAF  QT HETTGGWP AP G YAWGYCF+ E +P S+YC   P YPC  GK YYGRGP+QLSWNYNY  C            NPDL+ATD VLSFK+A+WFWMT Q PKPSCH+V+   W+PSA D  AGRLPGYG+ TN++NGG+ECG+G N  V +R+GFF  +CG  G+  G++LDCYNQRP+G
Sbjct:   54 KRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLL--GNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDCYNQRPFG 243

[Close]

BLAST of FC929822 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.877e-68
Identity = 120/204 (58.82%), Postives = 145/204 (71.08%), Query Frame = 1

Query:   10 IRHEEREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQSM 609
            I   +REIAAFFAQT HETTGGWP AP G YAWGYCF+ E   P DYC P+  +PC    KY+GRGPIQ+S NYNY  C           NNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG G ++ V++RIGF+  +CG  G+ PGD+LDC NQR +G  L+  +M
Sbjct:  117 ITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLL--NNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTM 318

[Close]

BLAST of FC929822 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 258.84 bits (660), Expect = 2.452e-68
Identity = 119/200 (59.50%), Postives = 146/200 (73.00%), Query Frame = 1

Query:   22 EREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQSM 609
            +REIAAFFAQT HETTGGW  AP G YAWGYC++ E   P DYC P+  +PC    KY+GRGPIQ+S NYNY  C           NNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII  W+PSA D  A RLPG+G+ TNIINGG+ECG+G ++ V++RIGF+  +C   G+ PGD+LDC NQR +G  L+  +M
Sbjct:  132 KREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLL--NNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 329

[Close]

BLAST of FC929822 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 258.07 bits (658), Expect = 4.182e-68
Identity = 120/201 (59.70%), Postives = 148/201 (73.63%), Query Frame = 1

Query:   19 EEREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQSM 609
            ++REIAAF  QT HETTGGWP AP G YAWGYCF+ E +P S YC  +  +PC    +YYGRGPIQ+SWNYNY +C           NNPDL+ATDPV+SFK+A+WFWMT Q PKPSCH+VI   W PS+ D  AGRLPGYG  TNIINGG+ECG+G ++ V++RIGF+  +C  FGI  GD+LDCY+QRP+G +L   S+
Sbjct:  119 KKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNP-STYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLL--NNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQRPFGSSLPLSSI 316

[Close]

BLAST of FC929822 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.462e-68
Identity = 119/204 (58.33%), Postives = 144/204 (70.59%), Query Frame = 1

Query:   10 IRHEEREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQSM 609
            I   +REIAAF AQT HETTGGWP AP G YAWGYCF+ E   P DYC P+  +PC    KY+GRGPIQ+S NYNY  C           NNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG G ++ V++RIGF+  +CG  G+ PG++LDC NQR +G  L+   M
Sbjct:  121 ITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLL--NNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQRSFGNGLLVDIM 322

[Close]

BLAST of FC929822 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.462e-68
Identity = 123/202 (60.89%), Postives = 147/202 (72.77%), Query Frame = 1

Query:   22 EREIAAFFAQTGHETTGG--WPDAPGGEYAWGYCFISEVSPPSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQSM 609
            +REIAAF AQT HETTGG  W  AP G YAWGYC+  E++PPS YC  DPNYPC  GK Y+GRGP+QLSWNYNY +C           NNPDLL++DP +SFKSA WFWMT Q PKPSCH VII  W PS++D  AGR+PGYG+ TNIINGG+ECG+G NA V +RIGF+  +C   G+  G++LDCYNQ P+G  +   SM
Sbjct:  126 KREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLL--NNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 324

[Close]

BLAST of FC929822 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 257.299 bits (656), Expect = 7.134e-68
Identity = 115/191 (60.21%), Postives = 141/191 (73.82%), Query Frame = 1

Query:   22 EREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 582
            ++E+AAFF QT HETTGGW  AP G Y+WGYCF  E +P SDYC+P+  +PC    +YYGRGP+QLSWNYNY  C           NNPDL+A D V++FK+AIWFWMTAQPPKPSCH VI  +W+PS  D  AGRLPGYG+ TNIINGG+ECG+G +  V +RIGF+  +C  FG+ PG +LDCYNQR +
Sbjct:  138 KKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLL--NNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQRSF 326

[Close]

BLAST of FC929822 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 9.317e-68
Identity = 118/200 (59.00%), Postives = 146/200 (73.00%), Query Frame = 1

Query:   22 EREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQSM 609
            +REIAAFFAQT HETTGGW  AP G YAWGYC++ E   P DYC P+  +PC    KY+GRGPIQ+S NYNY  C           NNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII  W+PS+ D  A RLPG+G+ TNIINGG+ECG+G ++ V++RIGF+  +C   G+ PGD+LDC NQR +G  L+  +M
Sbjct:  127 KREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLL--NNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 324

[Close]

BLAST of FC929822 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.589e-67
Identity = 118/204 (57.84%), Postives = 144/204 (70.59%), Query Frame = 1

Query:   10 IRHEEREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQSM 609
            I   +REIAAF AQT HETTGGWP AP G YAWGYCF+ E   P DYC P+  +PC    KY+GRGPIQ+S NYNY  C           NNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG G ++ V++RIGF+  +CG  G+ PGD+LDC NQR +G  L+  ++
Sbjct:  117 ITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLL--NNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 318

[Close]

BLAST of FC929822 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 2.076e-67
Identity = 117/204 (57.35%), Postives = 144/204 (70.59%), Query Frame = 1

Query:   10 IRHEEREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQSM 609
            I   +REIAAFFAQT HETTGGW  AP G YAWGYCF+ E   P DYC P+  +PC    KY+GRGPIQ+S NYNY  C           NNPDL+ATD ++SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG G ++ V++RIGF+  +CG  G+ PGD+LDC NQR +G  L+  ++
Sbjct:  115 ITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLL--NNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 316

The following BLAST results are available for this feature:

BLAST of FC929822 vs. ExPASy Swiss-Prot

BLAST of FC929822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
CHIT_CARPA	2.896e-69	61.46	Endochitinase OS=Carica papaya PE=1 SV=1	[more]
CHI1_SOLTU	1.877e-68	58.82	Endochitinase 1 (Fragment) OS=Solanum tuberosum GN...	[more]
CHI1_TOBAC	2.452e-68	59.50	Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1...	[more]
CHI2_PEA	4.182e-68	59.70	Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=...	[more]
CHIC_SOLLC	5.462e-68	58.33	Basic 30 kDa endochitinase OS=Solanum lycopersicum...	[more]
CHI1_GOSHI	5.462e-68	60.89	Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1	[more]
CHIB_ARATH	7.134e-68	60.21	Basic endochitinase B OS=Arabidopsis thaliana GN=C...	[more]
CHI2_TOBAC	9.317e-68	59.00	Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1...	[more]
CHI3_SOLTU	1.589e-67	57.84	Endochitinase 3 (Fragment) OS=Solanum tuberosum GN...	[more]
CHI2_SOLTU	2.076e-67	57.35	Endochitinase 2 (Fragment) OS=Solanum tuberosum GN...	[more]

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Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC929822 ID=FC929822; Name=FC929822; organism=Citrus clementina; type=EST; length=797bp
CTCGTGCGAATTCGGCACGAGGAAAGAGAAATCGCTGCCTTTTTTGCCCA
AACTGGCCATGAAACTACTGGGGGATGGCCCGATGCACCTGGTGGCGAAT
ATGCTTGGGGATATTGCTTTATAAGCGAAGTTAGCCCTCCGTCCGACTAC
TGTGATCCTAACTATCCATGTCGAGGGAAGTACTATGGCCGAGGTCCAAT
TCAACTCTCTTGGAATTACAATTACTTACGGTGCGGAGAAGGCCTAGGGC
TAGGAGAGGAGTTGTTGAACAATCCAGACCTTCTTGCTACTGATCCAGTA
CTATCATTCAAGTCAGCAATCTGGTTCTGGATGACTGCACAGCCACCAAA
GCCATCGTGCCACGAAGTCATTATCGACGAATGGAAACCATCAGCAAATG
ACGTAAACGCCGGCCGGCTTCCGGGATACGGTCTAACCACAAATATAATC
AACGGTGGAATTGAATGTGGCCAAGGTGGGAATGCCGCTGTACGTAACCG
TATTGGGTTCTTTACCACTTTCTGTGGCAAGTTTGGGATTCAGCCTGGTG
ACAGTCTTGATTGCTACAACCAACGACCTTATGGCCTTAATCTGATGGCA
CAATCTATGTGATCATCATGATCAACGTTTTAGTAAAATAAGCTTAATAA
AAGCTACTTAATAAAAACTTTAGATGTCACACTTGTAGGTGGACAACTAA
ATTGTTAGTTTGTTACGCTCTTATTGTAAGTAAATTAAATAAGACTGATC
CAACATGGATCAATGAGTCTTCACCATCTTTCAAAAAAAAAAAAAAA