FC929895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPG_HUMAN (T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4) HSP 1 Score: 111.694 bits (278), Expect = 3.938e-24 Identity = 62/178 (34.83%), Postives = 103/178 (57.87%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLM-KIAMTTLSSKILSQDKEHFGQLAVDAV 660 + E G + + + A IAD+++T LGPK M K+L G + +TNDG IL+ + + +PAAK +++IS+ QD+EVGDGTTSV++LAGE+L AE + ++HP +IS +R A D ++ + + SD+M I +++++K +S+ +A+DAV Sbjct: 9 VLSQNTKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGG--IVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKAL----DDMISTLKKISIPVDISDSDMMLNIINSSITTKAISRWSSLACNIALDAV 180
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPH_TETTH (T-complex protein 1 subunit eta (Fragment) OS=Tetrahymena thermophila PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.717e-24 Identity = 63/128 (49.22%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 292 NDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSD-LMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLK 672 NDGATIL L I +PAAK LVDI+K QDDEVGDGTTSV +LAGELL+E++ + +HP I G++ A + A L + + ET K + L+K A T+L+SK+L+ KE F +L V AV L+ Sbjct: 1 NDGATILNLLDIVHPAAKTLVDIAKAQDDEVGDGTTSVCLLAGELLKESKYFIEEGMHPQIITKGYKEALKLALQFLHENAHSVADKNETEKREMLIKCAQTSLNSKLLAHYKEFFSELVVQAVETLE 128
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPG_XENLA (T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 6.717e-24 Identity = 62/178 (34.83%), Postives = 104/178 (58.43%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLM-KIAMTTLSSKILSQDKEHFGQLAVDAV 660 + E G + + + A IAD+++T LGP+ M K+L G + +TNDG IL+ + + +PAAK +++IS+ QD+EVGDGTTSV++LAGE+L AE+ + ++HP IIS +R A D ++ + + +T +LM KI + +++K + + +A+DAV Sbjct: 8 VLSQNMKRESGRKVQSGNINAAKTIADIIRTCLGPRAMMKMLLDPMGG--IVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEQFLEQQMHPTVIISAYRKAL----DDMVNTLKEISTPVDTNDRELMLKIINSAINTKAIKLWADMACGIALDAV 179
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPG_YEAST (T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae GN=CCT3 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.146e-23 Identity = 68/194 (35.05%), Postives = 117/194 (60.31%), Query Frame = 1 Query: 145 ANEEK--GERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLRE-AEKLVAAKIHPMTIISGFRMAAECARDALLQ--KVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLK---GSTI*SPSNY 702 A++E+ G +A++++ A A+AD+++T LGPK M K+L G + +TNDG IL+ + + +PAAK ++++S+ QD+EVGDGTT+V++LAGE+L + A L+ IHP+ II + A A + + Q K VD + +A + K+ ++ +K + E +LA+DAV ++ G T+ N+ Sbjct: 10 ASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGG--LVLTNDGHAILREIDVAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAA-----MKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNF 196
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 60/188 (31.91%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 115 MGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAE-----CARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVM 663 MG + + G +A++ + A A+AD++++TLGP+ M K+L G + +TNDG IL+ + + +P AK ++++S+ D+EVGDGTTSV++LAGE+L AE V IHP I+ G+ A + C AL+ V D++ + + + + +K S+ + +A+ AV+ Sbjct: 6 MGPIMVLNSKTQRSTGRQAQLGNIQAARAVADIIRSTLGPRSMLKMLLDPMGG--IVITNDGNCILREVDVSHPTAKSMIELSRAHDEEVGDGTTSVIILAGEMLINAEPFVRTNIHPTIIVRGYNYALQEALTICEEWALVVDVHDSER--------VKSLVQSCIGAKFSSRWNDIMIDMALKAVL 183
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPG_MACFA (T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 61/178 (34.27%), Postives = 102/178 (57.30%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLM-KIAMTTLSSKILSQDKEHFGQLAVDAV 660 + E G + + + A IAD+++T LGPK M K+L G + +TNDG IL+ + + +PAAK +++IS+ QD+EVG GTTSV++LAGE+L AE + ++HP +IS +R A D ++ + + SD+M I +++++K +S+ +A+DAV Sbjct: 9 VLSQNTKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGG--IVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGGGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKAL----DDMISTLKKISIPVDINDSDMMLNIINSSITTKAISRWSSLACNIALDAV 180
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPG_DROME (T-complex protein 1 subunit gamma OS=Drosophila melanogaster GN=Cctgamma PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 64/180 (35.56%), Postives = 106/180 (58.89%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKV---VDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAV 660 + E G + ++ + AIAD+++T LGP+ M K+L G + +TNDG IL+ + + +PAAK +++I++ QD+EVGDGTTSV+VLAGE+L AE + +IHP II +R A E L ++ +D K+ A+ +D++K + T K + + + ++A+DAV Sbjct: 10 VLSQNTKRESGRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGG--IVMTNDGNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAYREALEDIVGHLQSQLSIQLDVKDKAK--MADVVKACVGT---KFIGKWSDLAVKIALDAV 182
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPG_TETPY (T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.814e-22 Identity = 56/179 (31.28%), Postives = 106/179 (59.22%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMR 666 + E G++A++A+ + A++++V +TLGP+ M K+L G + +TNDG IL+ + +++PAAK ++++++VQD+EVGDGTTSV+++AGE++ A+ + IHP I++ + A E ++K+ + + D + A LSS I ++ +G+L D ++ Sbjct: 11 VLNQNTKRESGKKAQLANISASKAVSEIVTSTLGPRSMLKMLLDPMGG--IVMTNDGNAILREIDVNHPAAKSMIELARVQDEEVGDGTTSVIIMAGEMMSAAKPFIERDIHPSIIVTAYYRALE----ESIKKIEELAVPIDVNNDDQVNKA---LSSCIGTKFTSRWGKLITDLALK 180
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPG_ENCCU (T-complex protein 1 subunit gamma OS=Encephalitozoon cuniculi GN=CCT3 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21 Identity = 59/172 (34.30%), Postives = 100/172 (58.14%), Query Frame = 1 Query: 154 EKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL 669 +K + + S + A I+ +++T LGP+ M K++ + + + +TNDG IL+ L + +P+A+ L++++K QDDEVGDGTTSVV+LA E+L E ++ +HP+ I A E A+ + N ET +KI +++SKI + K G LA++AV ++ Sbjct: 15 DKPAQIQNESAIAAKTISSVIRTCLGPRAMQKMVLT--KINSIELTNDGNAILRELDVAHPSARSLIELAKTQDDEVGDGTTSVVLLAAEILNEMTYILDRDVHPIRICKALGRALEICIKAIDGAAISLDSNEET----KIKIINGSVASKICNILKVPIGNLALEAVKKV 180
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPZ_RABIT (T-complex protein 1 subunit zeta OS=Oryctolagus cuniculus GN=CCT6 PE=2 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 4.075e-21 Identity = 59/186 (31.72%), Postives = 102/186 (54.84%), Query Frame = 1 Query: 115 MGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLK 672 M + +A + + A + A + D+++T LGPKG K+L S G G ++ +T DG +L + I +P A ++ ++ QDD GDGTTS V++ GELL++A+ ++ +HP I GF A E A L Q V + + ET L+ +A T+L +K+ ++ + + VD+++ +K Sbjct: 1 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVS-GAG-DIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQVLEQIKVSREMDRET----LIDVARTSLRTKVHAELADVLTEAVVDSILAIK 180 The following BLAST results are available for this feature:
BLAST of FC929895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929895 ID=FC929895; Name=FC929895; organism=Citrus clementina; type=EST; length=702bpback to top |