FC929895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPB_MACFA (T-complex protein 1 subunit beta OS=Macaca fascicularis GN=CCT2 PE=2 SV=3) HSP 1 Score: 237.269 bits (604), Expect = 6.214e-62 Identity = 122/189 (64.55%), Postives = 151/189 (79.89%), Query Frame = 1 Query: 112 SMGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGS 678 S+ IF+ A+EE+ E AR+ SF+GA+AI DLVK+TLGPKGMDKIL S+GR + VTNDGATILK++ +DNPAAKVLVD+S+VQDDEVGDGTTSV VLA ELLREAE L+A KIHP TII+G+R A + AR+ALL VD+ + F+ DLM IA TTLSSK+L+ K+HF +LAV+AV+RLKGS Sbjct: 5 SLAPVNIFKAGADEERAETARLTSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREALLSSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGS 193
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPB_HUMAN (T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4) HSP 1 Score: 237.269 bits (604), Expect = 6.214e-62 Identity = 122/189 (64.55%), Postives = 151/189 (79.89%), Query Frame = 1 Query: 112 SMGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGS 678 S+ IF+ A+EE+ E AR+ SF+GA+AI DLVK+TLGPKGMDKIL S+GR + VTNDGATILK++ +DNPAAKVLVD+S+VQDDEVGDGTTSV VLA ELLREAE L+A KIHP TII+G+R A + AR+ALL VD+ + F+ DLM IA TTLSSK+L+ K+HF +LAV+AV+RLKGS Sbjct: 5 SLAPVNIFKAGADEERAETARLTSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREALLSSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGS 193
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPB_MOUSE (T-complex protein 1 subunit beta OS=Mus musculus GN=Cct2 PE=1 SV=4) HSP 1 Score: 236.884 bits (603), Expect = 8.116e-62 Identity = 123/189 (65.08%), Postives = 151/189 (79.89%), Query Frame = 1 Query: 112 SMGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGS 678 S+ IF+ A+EE+ E AR++SF+GA+AI DLVK+TLGPKGMDKIL S+GR + VTNDGATILK++ +DNPAAKVLVD+S+VQDDEVGDGTTSV VLA ELLREAE L+A KIHP TIISG+R A + AR+ALL VD+ + F DLM IA TTLSSK+L+ K+HF +LAV+AV+RLKGS Sbjct: 5 SLAPVNIFKAGADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDAALMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIISGWREATKAAREALLSSAVDHGSDEARFWQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGS 193
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPB_BOVIN (T-complex protein 1 subunit beta OS=Bos taurus GN=CCT2 PE=2 SV=3) HSP 1 Score: 236.884 bits (603), Expect = 8.116e-62 Identity = 122/189 (64.55%), Postives = 151/189 (79.89%), Query Frame = 1 Query: 112 SMGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGS 678 S+ IF+ A+EE+ E AR++SF+GA+AI DLVK+TLGPKGMDKIL S+GR + VTNDGATILK++ +DNPAAKVLVD+S+VQDDEVGDGTTSV VLA ELLREAE L+A KIHP TII+G+R A + AR ALL VD+ + F+ DLM IA TTLSSK+L+ K+HF +LAV+AV+RLKGS Sbjct: 5 SLAPVNIFKAGADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGS 193
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPB_SCHPO (Probable T-complex protein 1 subunit beta OS=Schizosaccharomyces pombe GN=cct2 PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.384e-61 Identity = 124/190 (65.26%), Postives = 149/190 (78.42%), Query Frame = 1 Query: 112 SMGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGST 681 S+ +IF + +E+GE AR++SFVGA+A+ DLVK+TLGPKGMDKILQS G ++ VTNDGATILKS+ +DN AAKVLV+ISKVQDDEVGDGTTSV V A ELLR+AE +V AKIHP II G+R+A + A DAL +DN + F+SDL IA TTLSSKILSQ+K HF QLAVDAV+RLKGST Sbjct: 2 SLNPHQIFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSG-DIVVTNDGATILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDALRASSIDNSSDPAKFRSDLENIARTTLSSKILSQNKNHFAQLAVDAVLRLKGST 190
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPB_RAT (T-complex protein 1 subunit beta OS=Rattus norvegicus GN=Cct2 PE=1 SV=3) HSP 1 Score: 235.728 bits (600), Expect = 1.808e-61 Identity = 122/189 (64.55%), Postives = 151/189 (79.89%), Query Frame = 1 Query: 112 SMGVERIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGS 678 S+ IF+ A+EE+ E AR++SF+GA+AI DLVK+TLGPKGMDKIL S+GR + VTNDGATILK++ +DNPAAKVLVD+S+VQDDEVGDGTTSV VLA ELLREAE L+A KIHP TII+G+R A + AR+ALL VD+ + F DLM IA TTLSSK+L+ K+HF +LAV+AV+RLKGS Sbjct: 5 SLAPVNIFKAGADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREALLSSAVDHGSDEVKFWQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGS 193
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 6.871e-61 Identity = 121/186 (65.05%), Postives = 149/186 (80.11%), Query Frame = 1 Query: 127 RIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLV-AAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGST 681 +IF D+ EE+ E AR+++FVGA+A+ DLVK+TLGPKGMDK+LQS VTNDGATILKS+ +DNPAAKVLV+ISKVQDDEVGDGTTSV VL+ ELLREAEKL+ +KIHP TII G+R+A+ A DAL + VDN + F+ DL+ IA TTLSSKILSQDK+HF +LA +A++RLKGST Sbjct: 4 QIFGDQVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSAS-SNTCMVTNDGATILKSIPLDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGST 188
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPB_DICDI (T-complex protein 1 subunit beta OS=Dictyostelium discoideum GN=cct2 PE=1 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 9.922e-60 Identity = 117/184 (63.59%), Postives = 141/184 (76.63%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGST 681 I A+EE+GE AR++SFVGA+AI DLVKTTLGPKGMDKIL S E+ +TNDGATIL ++IDNPAAK+LVDIS+ QDDEVGDGTTSV VLAGELLRE E+LV K+HP TIISG+R+A E AR AL D+ + F+ DL+ IA TTLSSKIL +K+HF + VDAV+RL G+T Sbjct: 10 ILNQNASEERGEIARLSSFVGAIAITDLVKTTLGPKGMDKILISASNPNELIITNDGATILTKIYIDNPAAKILVDISRTQDDEVGDGTTSVCVLAGELLREGERLVQQKVHPQTIISGWRLALETARAALQSSTQDHSSDKVKFREDLLNIARTTLSSKILHTEKDHFANMVVDAVLRLNGNT 193
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 2.702e-57 Identity = 120/186 (64.52%), Postives = 145/186 (77.96%), Query Frame = 1 Query: 127 RIFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTG--RGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGS 678 +I +D A EE+GE AR++SFVGA+AI DLVK+TLGPKGMDKIL S + VTNDGATILKS+ +DNPAAKVLVD+S QD EVGDGTTSV VLA ELL+EAEKLV +IHP TIISG+R A A+++L + +++ +N + DL+KIA TTL SKILSQ KEHF QLAVDAV+RLKGS Sbjct: 5 QILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKKSSIESGDN---IRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLRLKGS 187
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPH_PLAF7 (T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate 3D7) GN=PFC0350c PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.036e-37 Identity = 85/181 (46.96%), Postives = 122/181 (67.40%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVD-NKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL 669 + ++ + +G + + I D+VKTTLGP+GMDK++ + R+VT+TNDGAT++ L+I +PAA +LVDI+K QDDEVGDGTTSVVV+AGELL EA+ L+ I P II GFR A A + L + ++ + +N E +S L+K A T L+SK++S KE FG+L V+AV +L Sbjct: 11 LLKEGTDTAQGRSQIIRNINACQIIVDIVKTTLGPRGMDKLIYTE---RDVTITNDGATVMNLLNISHPAASILVDIAKSQDDEVGDGTTSVVVVAGELLNEAKGLLNDGIEPNMIIDGFRNACNVAINKLNELSLNFSNKNEEEKRSILLKCAQTALNSKLVSNHKEFFGELVVNAVYKL 188 The following BLAST results are available for this feature:
BLAST of FC929895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929895 ID=FC929895; Name=FC929895; organism=Citrus clementina; type=EST; length=702bpback to top |