FC929895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPA_RAT (T-complex protein 1 subunit alpha OS=Rattus norvegicus GN=Tcp1 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.482e-34 Identity = 80/182 (43.96%), Postives = 124/182 (68.13%), Query Frame = 1 Query: 160 GERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGSTI*SPSNY 702 GE R + + A +IA++VK++LGP G+DK+L G +VT+TNDGATILK L +++PAAKVL +++ +QD EVGDGTTSVV++A ELL+ A++LV KIHP ++ISG+R+A + A + + ++ N + E + L+ A T++SSKI+ + + F + VDAV+ +K + I Y Sbjct: 14 GEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIG---DVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIINTD--ELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDIRGQPRY 190
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 5.482e-34 Identity = 76/167 (45.51%), Postives = 118/167 (70.66%), Query Frame = 1 Query: 160 GERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDA 657 G+ R + A+AIA++VK++LGP G+DK+L G +V VTNDGATILK L +++PA KVLV+++++QD+EVGDGTTSVV++A ELL+ A++LV K+HP TII+G+R+A + A + + + ++ + ++ A T++SSKI+ D + FG+L VDA Sbjct: 18 GQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVG---DVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTSDSIG--RQSVVNAAKTSMSSKIIGPDADFFGELVVDA 179
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THSB_METTH (Thermosome subunit beta OS=Methanobacterium thermoautotrophicum GN=thsB PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.160e-34 Identity = 77/172 (44.77%), Postives = 116/172 (67.44%), Query Frame = 1 Query: 160 GERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLK 672 G A+ + + +A+ V+TTLGPKGMDK+L S G ++ VTNDG TILK + I++PAAK+LV+++K Q+DEVGDGTT+ V++AGELL++AE L+ +IHP I G+R AAE A++ L +D + + LMK+AMT ++ K + +E +L VDAV +++ Sbjct: 20 GRDAQRMNILAGKILAETVRTTLGPKGMDKMLVDSLG---DIVVTNDGVTILKEMDIEHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKKAENLLEMEIHPTIIAMGYRQAAEKAQEILDDIAIDASD-----RDTLMKVAMTAMTGKGTEKAREPLAELIVDAVKQVE 183
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPH_DICDI (T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.160e-34 Identity = 78/180 (43.33%), Postives = 116/180 (64.44%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL 669 + ++ + +G +++ AI D V+TTLGP+GMDK++ + R +VT++NDGAT++K L I +PAA+ LVDI+K QD EVGDGTTSVV+LAGE L+ A+ + IHP II FR A E A+ + + VD K E + L K A T+++SK+++ K+ F ++ VDAV L Sbjct: 11 LLKEGTDTSQGLPQLISNINACCAIVDTVRTTLGPRGMDKLIYQSER--QVTISNDGATVMKLLDIVHPAARTLVDIAKSQDSEVGDGTTSVVILAGEFLKAAKPFLEEGIHPQIIIRAFRSACELAKQKIQELSVDIK--PENMREFLEKCASTSMNSKLIASHKQFFSKMVVDAVQLL 186
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPD_ASHGO (T-complex protein 1 subunit delta OS=Ashbya gossypii GN=CCT4 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.160e-34 Identity = 82/174 (47.13%), Postives = 115/174 (66.09%), Query Frame = 1 Query: 148 NEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL 669 N EK + R A+ + A A+AD ++T+LGPKGMDK+++ T RG E+ ++NDG TILK + I +P AK+LV++S QD E GDGTTSVV+L G LL AEKL+A IHP I F+ A + A + LL +K + +++L++ A T+LSSKI+SQ LAVD V+ L Sbjct: 14 NREKPQEVRKANIIAARAVADAIRTSLGPKGMDKMIK-TARG-EILISNDGHTILKQMAILHPVAKMLVEVSAAQDSEAGDGTTSVVILTGALLGAAEKLLAKGIHPTIIAESFQRAGQRAVEVLLGM---SKRISLQDRAELVRAASTSLSSKIVSQYSTFLAPLAVDCVLSL 182
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPA_CRIGR (T-complex protein 1 subunit alpha OS=Cricetulus griseus GN=TCP1 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.160e-34 Identity = 78/172 (45.35%), Postives = 121/172 (70.35%), Query Frame = 1 Query: 160 GERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLK 672 GE R + + A +IA++VK++LGP G+DK+L G +VT+TNDGATILK L +++PAAKVL +++ +QD EVGDGTTSVV++A ELL+ A++LV KIHP ++ISG+R+A + A + + ++ N + E + L+ A T++SSKI+ + + F + VDAV+ +K Sbjct: 14 GEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIG---DVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTD--ELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVK 180
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPA1_MOUSE (T-complex protein 1 subunit alpha A OS=Mus musculus GN=Tcp1 PE=1 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 7.160e-34 Identity = 78/172 (45.35%), Postives = 121/172 (70.35%), Query Frame = 1 Query: 160 GERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLK 672 GE R + + A +IA++VK++LGP G+DK+L G +VT+TNDGATILK L +++PAAKVL +++ +QD EVGDGTTSVV++A ELL+ A++LV KIHP ++ISG+R+A + A + + ++ N + E + L A T++SSKI+ + ++F + VDAV+ +K Sbjct: 14 GEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIG---DVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIINAD--ELGRDCLTNTAKTSMSSKIIGINGDYFANMVVDAVLAVK 180
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34 Identity = 81/172 (47.09%), Postives = 118/172 (68.60%), Query Frame = 1 Query: 160 GERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVD-NKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL 669 G A+ + + A IA+ V+TTLGPKGMDK+L S G ++ VTNDGATIL + + +PAAK++V+++K QD E GDGTT+ VV+AGELLR+AE+L+ IHP II G+ +AAE A++ L + + N ++ ET L++IAMT+++ K KE +LAVDAV ++ Sbjct: 21 GRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLG---DIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILEEIAIKVNPDDEET----LLRIAMTSITGKNAESHKELLAKLAVDAVKQV 185
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34 Identity = 82/182 (45.05%), Postives = 120/182 (65.93%), Query Frame = 1 Query: 160 GERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGSTI*SPSNY 702 GE R + + AIA++VK++LGP G+DK+L G +VTVTNDGATIL L +++PA KVLV++++ QD EVGDGTTSVV++A ELLR A +LV KIHP TII+G+R+A A + + + ++ K L+ +A T++SSKI+ D + F +AVDA++ +K S + Y Sbjct: 19 GEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIG---DVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSVDSLG--KESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRY 195
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34 Identity = 76/174 (43.68%), Postives = 122/174 (70.11%), Query Frame = 1 Query: 160 GERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGS 678 GE R + + A + A+ VKT+LGP G+DK+L G +VT+TNDGATILK L +++PAAK+LV ++++QD+EVGDGTTSVV+LA LL+ A++L++ +HP T+I+G+R+A A + + + + + K+ L+ +A T +SSK+++ D + F Q+AVDA+M ++ S Sbjct: 11 GESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVG---DVTITNDGATILKLLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREACKYIQEHMAYDVN--KLGKAGLINVARTAMSSKLINLDADMFSQMAVDALMAVEVS 179 The following BLAST results are available for this feature:
BLAST of FC929895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929895 ID=FC929895; Name=FC929895; organism=Citrus clementina; type=EST; length=702bpback to top |