FC929895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.752e-32 Identity = 72/168 (42.86%), Postives = 114/168 (67.86%), Query Frame = 1 Query: 160 GERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAV 660 G A+ + + I + V++TLGPKGMDK+L G ++ VTNDG TILK + +++PAAK+L++++K Q+ EVGDGTT+ VV+AGELLR+AE+L+ +HP +I G+++A + A++ L + +D K + K L KIAMT+++ K + KE G++ V+AV Sbjct: 19 GRDAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLG---DIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIVIKGYQLAVQKAQEVLKEIAMDVKADD---KEILHKIAMTSITGKGAEKAKEKLGEMIVEAV 180
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPE_SCHPO (T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe GN=cct5 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.752e-32 Identity = 79/183 (43.17%), Postives = 117/183 (63.93%), Query Frame = 1 Query: 130 IFRDEANEEK--GERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECA---RDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVM 663 + RD+ + + G A + + +A++V+T+LGP+G+DKIL S E+TVTNDGATIL + +++ AK+LV +SK QDDE+GDGTT VVVLAG LL +AE L+ IHP+ I G+ A + A DA+ V + EN ++L + A T+L SK++S+ +HF +AVDAV+ Sbjct: 20 LVRDQEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDG--EITVTNDGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAISDVVDFSPENT----TNLFRSAKTSLGSKVVSKAHDHFANIAVDAVL 196
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPE_ARATH (T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana GN=At1g24510 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.143e-31 Identity = 73/176 (41.48%), Postives = 116/176 (65.91%), Query Frame = 1 Query: 136 RDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVM 663 +D+ +G A+ A+ A+A +++++LGPKGMDK+LQ G ++T+TNDGATIL+ + +DN AK++V++S+ QD E+GDGTT VVV+AG LL +AE+ + IHP+ I G+ MA+ A + L+++ E L++ MTTLSSKI+++ K ++AV AV+ Sbjct: 18 QDQKTRLRGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQ--GPDGDITITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASRVAVEH-LERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKRSLAEIAVKAVL 190
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPD_AEDTR (T-complex protein 1 subunit delta OS=Aedes triseriatus PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.493e-31 Identity = 76/178 (42.70%), Postives = 118/178 (66.29%), Query Frame = 1 Query: 142 EANEEKGERA--RMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL 669 +A ++K + A R ++ A A++D ++T+LGP+GMDK++Q+ EVT+TNDGATILK +++ +PAAK+LV++S+ QD E GDGTTSVVV+AG LL+ EKL+ IHP I F+ + A D L + + T + L+K A T+L+SK++SQ +AV+AV+++ Sbjct: 15 QAYKDKSKPADIRQSNINAAKAVSDAIRTSLGPRGMDKMIQAANG--EVTITNDGATILKQMNVIHPAAKMLVELSRAQDVEAGDGTTSVVVVAGALLKAVEKLLQMGIHPTAISDAFQKCSAKAVDILTEM---STPIELTDRESLVKSASTSLNSKVVSQHSSQLAPIAVEAVLKV 187
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPD_DEBHA (T-complex protein 1 subunit delta OS=Debaryomyces hansenii GN=CCT4 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.950e-31 Identity = 77/179 (43.02%), Postives = 120/179 (67.04%), Query Frame = 1 Query: 133 FRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL 669 FRD+ EK + R ++ + A A++D ++T+LGPKGMDK++++ + E+ ++NDGATILK + + +PAA++LVD+S QD E GDGTTSV +L G LL AEKL+ IHP I F+ AA + + LL+ + +K + + K L++ A T+LSSKI+SQ LAV++V+++ Sbjct: 16 FRDK---EKPQEVRKSNILAARAVSDAIRTSLGPKGMDKMIKT--KNGEIIISNDGATILKHMAVLHPAARMLVDVSAAQDVEAGDGTTSVAILTGSLLGAAEKLLNKGIHPTLISESFQRAATRSAEVLLE--MSHKISLDD-KEALIRAASTSLSSKIVSQHSSLLSPLAVNSVLKV 186
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THSB_AERPE (Thermosome subunit beta OS=Aeropyrum pernix GN=thsB PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.547e-31 Identity = 76/178 (42.70%), Postives = 116/178 (65.17%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAV 660 I ++ G A A+ + AIA ++KTT GPKGMDK+L S G ++T+TN+GATIL + + +PAAK+LV ISK Q+DE GDGT + V+ AGELL+EAEKL+ IHP I+ G++ A A + +++ + + + K L IA T+L+SK +++ +++F +LAV+AV Sbjct: 18 ILKEGTQRSYGREALRANIMAVRAIAQILKTTYGPKGMDKMLVDSLG---DITITNNGATILDKMDVAHPAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKEAEKLLDINIHPTIIVEGYKEALRKASE-VIESIAEPVSYDDVEK--LKLIAKTSLNSKAVAEARDYFAELAVEAV 189
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.547e-31 Identity = 75/180 (41.67%), Postives = 120/180 (66.67%), Query Frame = 1 Query: 130 IFRDEANEEK--GERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVM 663 + R++ N+++ G A + + A A+A+ ++T+LGP+G+DK+L S +VT+TNDGATI++ + + + AK++V++SK QD E+GDGTT VVVLAG LL EAEKL+ IHP+ I GF +A + A + L + +K E + L++ A T+L SKI+++ F ++AVDAV+ Sbjct: 19 VMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDG--DVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETL--DSISDKFPVEN-RERLVETAQTSLGSKIVNRSLRQFAEIAVDAVL 193
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPB_ENCCU (T-complex protein 1 subunit beta OS=Encephalitozoon cuniculi GN=CCT2 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.547e-31 Identity = 80/176 (45.45%), Postives = 115/176 (65.34%), Query Frame = 1 Query: 151 EEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMA-AECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKG 675 EE+G+ A+ G + D++KTTLGPKGM K+L +G+ V VTNDGA IL +L ID+P+A++L+ S QD E GDGTTSV +LA L++EA KL ++HP I+ G+RMA A+C + +L + + E K DL+K+ TTL SK+L D E F ++ V+AV +L+G Sbjct: 13 EERGDDAKRTILAGTDIVGDILKTTLGPKGMLKML----KGQHVNVTNDGAFILNNLMIDSPSARILIGSSTGQDWEEGDGTTSVAILASLLVKEAGKL---EMHPTKILRGYRMAQAKC--EEILSSI-----SFEATKEDLLKLVRTTLCSKVLRYDLERFCEICVNAVEKLEG 174
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THSB_ARCFU (Thermosome subunit beta OS=Archaeoglobus fulgidus GN=thsB PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.344e-31 Identity = 77/179 (43.02%), Postives = 117/179 (65.36%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVD-NKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAV 660 I R+ G A+ + + A IA+ V++TLGPKGMDK+L S G +V +TNDG TILK + +++PAAK++++++K QD+EVGDGTT+ VVLAGELL+ AE+L+ +IHP I +G+R AAE A + L + + +K++ E K KIA T ++ K + ++AV+AV Sbjct: 11 ILREGTQRTVGRDAQRMNIMAARVIAEAVRSTLGPKGMDKMLVDSLG---DVVITNDGVTILKEIDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKRAEELLDQEIHPAIIANGYRYAAEKALEILNEIAIPISKDDDEILK----KIATTAMTGKGAEVAIDKLAEIAVNAV 182
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THSA_SULAC (Thermosome subunit alpha OS=Sulfolobus acidocaldarius GN=thsA PE=3 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 4.344e-31 Identity = 78/184 (42.39%), Postives = 118/184 (64.13%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECAR---DALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQ---LAVDAV 660 +F++ + G A + + A+ +A+++K++LGP+G+DK+L S G +VT+TNDGATI+K + I +PAAK+LV+ +K QD EVGDGTTS VVLAG LL +AE+L+ +HP II G++ A A D L K+ N ++ T K+ L KI TT+SSK ++ E + L +DA+ Sbjct: 7 LFKEGTSRSSGRDALRNNILAAVTLAEMLKSSLGPRGLDKMLIDSFG---DVTITNDGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKAEELLEQNVHPTIIIDGYKKALTKALEIIDQLSLKIDVNDLSSPTAKAQLKKIVSTTMSSKFIAGGAEEIDKIIDLVIDAI 187 The following BLAST results are available for this feature:
BLAST of FC929895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929895 ID=FC929895; Name=FC929895; organism=Citrus clementina; type=EST; length=702bpback to top |