FC929895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPE_ENCCU (T-complex protein 1 subunit epsilon OS=Encephalitozoon cuniculi GN=CCT5 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.310e-29 Identity = 71/176 (40.34%), Postives = 110/176 (62.50%), Query Frame = 1 Query: 139 DEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHI-DNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVM 663 D+ KG++ +A+ +IA + T+LGP GMDKILQS + ++ VTNDGATILK + + +NP ++++V +S+ QD+E+GDGTTSVVVLA LL +A+ L+ +HP+ I GF + A ++ + + E K +MK A T+L SKI+ + E F ++ DAV+ Sbjct: 19 DKGCRIKGQQCILANIGVVRSIATFLSTSLGPTGMDKILQS--KDEDIVVTNDGATILKEMEMTENPISRLIVQLSESQDEEIGDGTTSVVVLASALLDQAQALLGQGVHPIKISEGFEVGLGHA----VEHLSEISEEISDLKETMMKAAKTSLGSKIVYKSLERFAEICTDAVL 188
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.310e-29 Identity = 75/176 (42.61%), Postives = 112/176 (63.64%), Query Frame = 1 Query: 148 NEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL--LQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL 669 + +K + R ++ A A+AD V+T+LGPKGMDK++Q +G +VT+TNDGATILK + + +P+AK+LV++SK QD E GDGTTSVVV+AG LL +L+ IHP I F+ A + + L + + V + + L+ A T+L SK++SQ ++VDAVMR+ Sbjct: 23 DRDKPAQIRYSNISAAKAVADAVRTSLGPKGMDKMIQDE-KG-DVTITNDGATILKQMQVLHPSAKMLVELSKAQDIEAGDGTTSVVVIAGALLDSCNRLLQRGIHPTIISESFQKAVDKGVEVLTAMSQPVQLGD-----RETLLNSATTSLCSKVVSQYSSLLAPMSVDAVMRV 191
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.310e-29 Identity = 75/175 (42.86%), Postives = 112/175 (64.00%), Query Frame = 1 Query: 139 DEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVM 663 D +EK + R ++ V A A+AD ++T+LGPKGMDK++ S EV ++NDGATIL++L + +PAAK+L +++K QD E GDGTTSV V+AG LL +L+A IHP I F +A + + L+ V + T + L+K A T+L+SK++SQ + +AVDAV+ Sbjct: 17 DFDEKEKEKDVRTSNIVAARAVADAIRTSLGPKGMDKMIISPNN--EVLISNDGATILQNLELRHPAAKMLAELAKAQDIEAGDGTTSVCVIAGSLLGAVSQLMAKGIHPSIISEAFNLALNKSLEVLVSMSV---PVSLTDRVSLVKSATTSLNSKVVSQ-YTNLASIAVDAVL 185
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THSB_SULTO (Thermosome subunit beta OS=Sulfolobus tokodaii GN=thsB PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28 Identity = 72/184 (39.13%), Postives = 116/184 (63.04%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECAR---DALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL 669 I ++ ++ G+ A + A+ + +K+T GP+GMDK+L S G ++T+TNDGATIL + + +PAAK+LV I+K QD+E DGT + V+LAGEL+++AE+L+ +IHP I+SGF+ A E A + + QKV N + L K+AMT+L+SK ++ +E+ + AV ++ Sbjct: 18 ILKEGSSRTYGKEALRINIAAVKAVEEALKSTYGPRGMDKMLVDSLG---DITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVILAGELVKKAEELLYKEIHPTIIVSGFKKAEEQALKTIEEIAQKVSVNDMDI------LKKVAMTSLNSKAVAGAREYLADIVAKAVTQV 192
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THSA_SULTO (Thermosome subunit alpha OS=Sulfolobus tokodaii GN=thsA PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28 Identity = 73/183 (39.89%), Postives = 114/183 (62.30%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECAR---DALLQKVVDNKENAETFKSDLMKIAMTTLSSKILS--QDKEHFGQLAVDAV 660 + ++ G A + + A+ +A+++K++LGP+G+DK+L S G +VT+TNDGATI+K + I +PAAK+LV+ +K QD EVGDGTTS VVLAG LL +A+ L+ IHP II G++ A + D L K+ + N+ + L KI TT+SSK ++ ++ + + +DAV Sbjct: 8 LLKEGTQRSSGRDALKNNILAAVTLAEMLKSSLGPRGLDKMLIDSFG---DVTITNDGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKADDLLDQNIHPTIIIEGYKKALNKSLEIIDQLATKIDVSNLNSLATRDQLKKIVYTTMSSKFIAGGEEMDKIMNMVIDAV 187
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THSB_SULAC (Thermosome subunit beta OS=Sulfolobus acidocaldarius GN=thsB PE=3 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.018e-28 Identity = 68/181 (37.57%), Postives = 115/181 (63.54%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL 669 I ++ ++ G+ A + A+ + +KTT GP+GMDK+L S G ++T+TNDGATIL + + +PAAK+LV I+K QD+E DGT + V+ +GEL+++AE+L+ +IHP I+SG++ A E A + + + K + + L K+A+T+LSSK ++ +EH + V A+ ++ Sbjct: 18 ILKEGSSRTYGKEALRINIAAVKAVEEALKTTYGPRGMDKMLVDSLG---DITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEELLYKEIHPTIIVSGYKKAEEMAIKTI--EEISTKVSVNDTEI-LRKVALTSLSSKAVAGAREHLADIVVKAITQV 192
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THS3_HALVO (Thermosome subunit 3 OS=Halobacterium volcanii GN=cct3 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.442e-28 Identity = 70/162 (43.21%), Postives = 106/162 (65.43%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLM-KIAMTTLSSK 609 I + N G A+ ++ A+A+ V+TTLGP+GMDK+L S+G EV +TNDGATIL+ + I++PAA++LV++S+ Q++EVGDGTT+ VL GELL AE L+ +HP I+ G+ AA A+DA+ V+D T DL+ K+A ++++ K Sbjct: 11 ILAEGTNRTHGRSAQDSNIRAGKAVAEAVRTTLGPRGMDKMLVDSSG---EVVITNDGATILEKMDIEHPAAQMLVEVSQTQEEEVGDGTTTAAVLTGELLAHAEDLLDDDLHPTVIVEGYTEAARIAQDAIDDMVLD-----VTLDDDLLRKVAESSMTGK 164
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THSB_SULSH (Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.001e-27 Identity = 70/182 (38.46%), Postives = 113/182 (62.09%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKI-LQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSD-LMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL 669 I ++ ++ G+ A A+ AI + +K+T GP+GMDK+ + S G ++T+TNDGATIL + + +P K+LV I+K QD+E DGT + V+LAGEL ++AE L+ +IHP I+SG++ A E A L+ + D + +D L K+A+T+L SK ++ +E+ L V AV ++ Sbjct: 17 ILKEGSSRTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMFVDSLG---DITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIA----LKTIQDIAQPVSINDTDVLRKVALTSLGSKAVAGAREYLADLVVKAVAQV 191
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THSG_SULSO (Thermosome subunit gamma OS=Sulfolobus solfataricus GN=thsC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.308e-27 Identity = 71/178 (39.89%), Postives = 108/178 (60.67%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDK--EHFGQLAVDA 657 + R+ G + + A + +++K++LGPKG+DK+L G++VT+TNDGATI+K++ + +P AK+L++ +K D EVGDGTTSVVVLAG LL +AE L+ KIHP II G+R A + + LL+ + D + + + + TTLSSK S + E L +DA Sbjct: 4 LLREGTQRSTGNEVILNNIAVAKILLEMLKSSLGPKGLDKMLVE---GQDVTITNDGATIVKNMEVQHPTAKLLIETAKTVDTEVGDGTTSVVVLAGLLLEKAEDLLNQKIHPTVIIEGYRKALNSSLE-LLKNIADKISPED--RKIVHDLVYTTLSSKFFSTEHTLEKIINLVIDA 175
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.708e-27 Identity = 70/181 (38.67%), Postives = 112/181 (61.88%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL 669 I ++ ++ G+ A A+ AI + +K+T GP+GMDK+L S G ++T+TNDGATIL + + +P K+LV I+K QD+E DGT + V+LAGEL ++AE L+ +IHP I+SG++ A E A +Q++ +T L K+A+T+L SK ++ +E+ L V AV ++ Sbjct: 17 ILKEGSSRTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMLVDSLG---DITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALKT-IQEIAQPVTINDT--DVLRKVALTSLGSKAVAGAREYLADLVVKAVAQV 191 The following BLAST results are available for this feature:
BLAST of FC929895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929895 ID=FC929895; Name=FC929895; organism=Citrus clementina; type=EST; length=702bpback to top |