FC930002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_THELT (Glycogen synthase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glgA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.479e-31 Identity = 74/184 (40.22%), Postives = 109/184 (59.24%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPW 679 F IHN+ YQG F LPA + + D ++ Y + IN++K GIL SD+V TVSP YAQE+ + E G +LD ++R + GI+NG+D E+NP TDK I V YD + + K + K LQ E+ L V ++P+IG I RL +QKG D++ + + + ++Q +VLGTG K + Sbjct: 166 FTIHNLGYQGVFNPGYMKFAGLPA-YLFNIDGLEFYGQ------INFLKGGILFSDIVTTVSPTYAQEIQT-EQFGEKLDGVLRLRAEDLYGILNGIDYSEYNPATDKRIYVNYDIDHI-EKKKMNKSELQKELNLQVRDDVPLIGMINRLVDQKGLDLIEKIVDYMMMFDIQFVVLGTGDKKY 340 HSP 2 Score: 35.039 bits (79), Expect = 2.479e-31 Identity = 13/30 (43.33%), Postives = 18/30 (60.00%), Query Frame = 1 Query: 46 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 A+DW T L+P YLKT+Y+ + VF Sbjct: 137 AHDWQTGLVPVYLKTLYRTDPFFNRTATVF 166
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSY23_ORYSJ (Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-3 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.381e-31 Identity = 84/213 (39.44%), Postives = 121/213 (56.81%), Query Frame = 2 Query: 53 TGILPLSLVT*KLCISPKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK 673 T +LP+ L K G + + IHNIAYQGR ++F + LP + F D PV G N AG+ +D V+TVSP Y EL + E G L +IIR+ K GIVNG+D +EWNP D ++ Y +++ +KP K ALQ E+GL V ++P+IGFIGRL+ QKG DI+ A+P ++VQ+++LG+G++ Sbjct: 460 TALLPVYL---KAYYRDNGMMQYTRSVLVIHNIAYQGRGPVDEFPYMELPEHYLDHFKLYD----PVGGEHANIFGAGLKMADRVVTVSPGYLWELKTTEG-GWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSSKPRCKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSGRR 664
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: SSY23_ORYSI (Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=SSII-3 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.416e-31 Identity = 84/213 (39.44%), Postives = 120/213 (56.34%), Query Frame = 2 Query: 53 TGILPLSLVT*KLCISPKGCTKVPKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK 673 T +LP+ L K G + + IHNIAYQGR ++F + LP + F D PV G N AG+ +D V+TVSP Y EL + E G L +IIR+ K GIVNG+D +EWNP D ++ Y +++ KP K ALQ E+GL V ++P+IGFIGRL+ QKG DI+ A+P ++VQ+++LG+G++ Sbjct: 460 TALLPVYL---KAYYRDNGMMQYTRSVLVIHNIAYQGRGPVDEFPYMELPEHYLDHFKLYD----PVGGEHANIFGAGLKMADRVVTVSPGYLWELKTTEG-GWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSGKPRCKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSGRR 664
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_FERNB (Glycogen synthase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=glgA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 9.282e-31 Identity = 72/184 (39.13%), Postives = 116/184 (63.04%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRS 685 IHN+ YQG F E LP + + D I+ Y K IN++K GI+ SD++ TVSP YA+E + ++ G +L+ ++R + + GI+NG+D +E+NPLTD I V YD +T+ + K K+ LQ E+GLP +R++P+ G I RL +QKG DI+A + + ++Q ++LGTG++ + + Sbjct: 169 IHNLGYQGIFEPEYLRFAGLP-DYLYNIDGIEFYGK------INFLKGGIIFSDIINTVSPTYAKE-IQQKEYGEKLEGVLRARSSDLYGILNGIDYEEFNPLTDNKIYVNYDLNTI-EKKKENKKLLQKELGLP-ERDVPMFGMINRLVDQKGLDIMAEIMDYVSLFDIQFVLLGTGEEKYEN 342 HSP 2 Score: 33.113 bits (74), Expect = 9.282e-31 Identity = 14/23 (60.87%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 31 DVVFVANDWHTSLIPCYLKTMYK 99 D+V V NDW T+LIP YLKT+++ Sbjct: 134 DIVHV-NDWQTALIPVYLKTVFR 155
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA2_NITOC (Glycogen synthase 2 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgA2 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.049e-30 Identity = 75/192 (39.06%), Postives = 116/192 (60.42%), Query Frame = 2 Query: 122 PKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSL 691 P F IHN+AYQG F+ + F L LP+ + S ++ YN+ I+++K G++ +D + TVSP YA+E+++ E G LD ++R + GI+NG D Q W+P D +I +YD T K K ALQ GLP D +PV+GF+GRL EQKG D++ A+P + E +Q++ LG G++ +++L Sbjct: 159 PATLFTIHNLAYQGVFSRQQFDALELPSAWWSPAA-LEFYNQ------ISFIKGGLVFADWLTTVSPTYAKEILTPEF-GCGLDGVLRGRSKRLTGILNGADYQRWDPRHDPFIEKRYD-QTCWSHKASNKLALQRRYGLPEDDTLPVLGFVGRLVEQKGIDLILGALPKLLAEKIQVVFLGEGEERHQNAL 341 HSP 2 Score: 22.7126 bits (47), Expect = 2.049e-30 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 49 NDWHTSLIPCYL 84 NDW T LIP +L Sbjct: 141 NDWQTGLIPPFL 152
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_CELJU (Glycogen synthase OS=Cellvibrio japonicus (strain Ueda107) GN=glgA PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.475e-30 Identity = 72/184 (39.13%), Postives = 116/184 (63.04%), Query Frame = 2 Query: 122 PKLFFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 667 P F IHN+AY+G F+++ FG LNLP F + ++ Y + +++MK G+ +D + TVSP YAQE+ E G LD +IR + + GI+NG+D EWNP DK++ Y+ T+ + K K ALQ +GL ++ ++P++GFIGRL +QKG D++ +P ++++ Q++VLG+G Sbjct: 160 PATLFTIHNLAYRGLFSYQAFGELNLPPAFWHH-ERLEFYGQ------MSFMKGGLAFADFITTVSPSYAQEIQLPEH-GYGLDGLIRYRQESLSGILNGIDTDEWNPGKDKHLAATYNRRTLGN-KTKNKLALQETLGLALNADVPLLGFIGRLVDQKGIDLILNQLPLLLEQDCQLVVLGSG 334 HSP 2 Score: 22.3274 bits (46), Expect = 3.475e-30 Identity = 8/12 (66.67%), Postives = 8/12 (66.67%), Query Frame = 1 Query: 49 NDWHTSLIPCYL 84 NDW T LIP L Sbjct: 142 NDWQTGLIPALL 153
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_ANADF (Glycogen synthase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=glgA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 7.672e-30 Identity = 70/183 (38.25%), Postives = 114/183 (62.30%), Query Frame = 2 Query: 134 FCIHNIAYQGRFAFEDFGLLNLPAQF--KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK 670 F IHN+AYQG F+ L LP + +F D ++N++KAG++ +D + TVSP YA+E+ + + GV LD ++R + GI+NG+DV+EW+P TD+++ +Y A+ + K K ALQ E+GLP ++P++ IGRL EQKG D++ AA+ + ++Q+++LGTG+ Sbjct: 160 FTIHNLAYQGVFSKHVVPALGLPWDVFRYEAMEFHD---------QLNFLKAGLVFADALTTVSPTYAREIATPQG-GVGLDALLRHRARDLHGILNGIDVEEWDPATDRHLPARYSAAD-LSGKAACKSALQRELGLPERPDVPLVAMIGRLAEQKGLDLVVAALGELLARDLQLVLLGTGR 331 HSP 2 Score: 25.0238 bits (53), Expect = 7.672e-30 Identity = 10/29 (34.48%), Postives = 14/29 (48.28%), Query Frame = 1 Query: 49 NDWHTSLIPCYLKTMYKPKGMYKSAKVVF 135 NDW T L+P L+ + A+ VF Sbjct: 132 NDWQTGLVPFLLRREHARDAALAGARTVF 160
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_THESQ (Glycogen synthase OS=Thermotoga sp. (strain RQ2) GN=glgA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.986e-30 Identity = 69/190 (36.32%), Postives = 115/190 (60.53%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNSWR 703 IHN+ YQG F + LP + + D ++ Y R++N++K GI+ SD++ TVSP YA+E+ + E+ G +L+ ++R + GI+NG+D + +NP TD+YI V YD + ++ K K LQ E+GLPV++ V G I RL QKG D+L + + + ++QI+VLGTG + + ++ ++ Sbjct: 168 IHNLGYQGVFDPKYLSFAGLP-DYVFTIDGLEFY------RQLNFLKGGIVFSDVINTVSPTYAEEIQT-EEYGEKLEGVLRMRSKDLYGILNGIDYELYNPATDRYIYVNYDVNR-LELKWENKVKLQEELGLPVNKETAVAGLISRLVPQKGLDLLVDVMDYLMLFDLQIVVLGTGDEQYENAFRKFQ 348 HSP 2 Score: 34.6538 bits (78), Expect = 9.986e-30 Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 31 DVVFVANDWHTSLIPCYLKTMYK 99 D+V V NDW T+LIP YLKT+Y+ Sbjct: 133 DIVHV-NDWQTALIPVYLKTVYR 154
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_THEP1 (Glycogen synthase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glgA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.986e-30 Identity = 69/190 (36.32%), Postives = 115/190 (60.53%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNSWR 703 IHN+ YQG F + LP + + D ++ Y R++N++K GI+ SD++ TVSP YA+E+ + E+ G +L+ ++R + GI+NG+D + +NP TD+YI V YD + ++ K K LQ E+GLPV++ V G I RL QKG D+L + + + ++QI+VLGTG + + ++ ++ Sbjct: 168 IHNLGYQGVFDPKYLSFAGLP-DYVFTIDGLEFY------RQLNFLKGGIVFSDVINTVSPTYAEEIQT-EEYGEKLEGVLRMRSKDLYGILNGIDYELYNPATDRYIYVNYDVNR-LELKWENKVKLQEELGLPVNKETAVAGLISRLVPQKGLDLLVDVMDYLMLFDLQIVVLGTGDEQYENAFRKFQ 348 HSP 2 Score: 34.6538 bits (78), Expect = 9.986e-30 Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 31 DVVFVANDWHTSLIPCYLKTMYK 99 D+V V NDW T+LIP YLKT+Y+ Sbjct: 133 DIVHV-NDWQTALIPVYLKTVYR 154
BLAST of FC930002 vs. ExPASy Swiss-Prot
Match: GLGA_THEMA (Glycogen synthase OS=Thermotoga maritima GN=glgA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.204e-29 Identity = 69/190 (36.32%), Postives = 113/190 (59.47%), Query Frame = 2 Query: 140 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPWRSSLNSWR 703 IHN+ YQG F + LP + + D ++ Y + +N++K GI+ SD++ TVSP YA+E+ + E+ G +LD ++R + GI+NG+D + +NP TD+YI V YD + ++ K K LQ E+GLPV++ V G I RL QKG D+L + + ++QI+VLGTG + + ++ ++ Sbjct: 168 IHNLGYQGVFDPKYLSFAGLP-DYVYTIDGLEFYGQ------LNFLKGGIVFSDVINTVSPTYAEEIQT-EEYGEKLDGVLRMRSKDLYGILNGIDYELYNPATDRYIYVNYDVNR-LELKWENKVKLQEELGLPVNKETAVAGLISRLVPQKGLDLLVDVMDYLTLFDLQIVVLGTGDEQYENAFRKFQ 348 HSP 2 Score: 34.6538 bits (78), Expect = 2.204e-29 Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 31 DVVFVANDWHTSLIPCYLKTMYK 99 D+V V NDW T+LIP YLKT+Y+ Sbjct: 133 DIVHV-NDWQTALIPVYLKTVYR 154 The following BLAST results are available for this feature:
BLAST of FC930002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 352
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930002 ID=FC930002; Name=FC930002; organism=Citrus clementina; type=EST; length=709bpback to top |