FC930408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: TPC1_PHANO (Mitochondrial thiamine pyrophosphate carrier 1 OS=Phaeosphaeria nodorum GN=TPC1 PE=3 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13 Identity = 53/190 (27.89%), Postives = 83/190 (43.68%), Query Frame = 3 Query: 135 GVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWI-ILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMV---KLACGSIAGLLGQTFTYPLD 692 G G++K+I + EG G ++GN + + Y ++ + AY + + + P I+G+ AG A TYPLDL+RT+ A Q + VY I + + G G +RG + I PY GL F YE +K V D + + G +A ++ +T YPLD Sbjct: 65 GTLGTLKQILRDEGVTGLWKGNIPAELLYLTYGSVQFSAYTNISQMLDTIPAPYTLPSSANSFISGAGAGAAATTVTYPLDLLRTRFAAQ-------------GKDRVYTSIVASLKSIAQHEGPTGFFRGLGAGVSQIVPYMGLFFASYESLK-PVMADSPLPLPLGSSDAVAGVVASVVSKTAVYPLD 240 HSP 2 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 47/149 (31.54%), Postives = 74/149 (49.66%), Query Frame = 3 Query: 138 VFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYE 584 + S+K IA+ EG GF+RG GA V++IVPY L + +YE + + S + G D +AG A + YPLD R +L Q + ++ + + + Y G+ + +K G RG+YRG SL P + + + YE Sbjct: 163 IVASLKSIAQHEGPTGFFRGLGAGVSQIVPYMGLFFASYESLKPVMADSPLPLPLGS-SDAVAGVVASVVSKTAVYPLDTTRKRLQVQGPNRARYVHRNIPT----YSGVLMTLQHIWKHEGRRGMYRGLTVSLLKAAPASAVTMWTYE 306
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: TPC1_KLULA (Mitochondrial thiamine pyrophosphate carrier 1 OS=Kluyveromyces lactis GN=TPC1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 56/211 (26.54%), Postives = 103/211 (48.82%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRI-GVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIM---VKLACGSIAGLLGQTFTYPLDVV 698 P++ VKI Q + + + G+ +++ I K EG ++GN + A V Y A+ + +Y + FP S+ L G+ AG T+ + +YPLDL+RT+L +++ + + V+ E RQ + G+RG + G + ++ + + F YE + V E+H+K+ V + G IAG + +T +P+D + Sbjct: 38 PMDTVKIRYQLQPVQEDKYKGIASTVRTIMKEEGLRALWKGNIPATAMYVVYGAVQFGSYSWFNNVWSAKFPRFSQ-QGQTLTVGALAGMTSSVVSYPLDLLRTRLI-----ANRTSHRTSVAEE---------CRQMWLNEGVRGFFTGISTAMTTVTLSTAIMFLTYETV-NIVCENHEKEFWSRPVSASSGIIAGFVSKTMVFPIDTL 232
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: MCFM_DICDI (Mitochondrial substrate carrier family protein M OS=Dictyostelium discoideum GN=mcfM PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 57/201 (28.36%), Postives = 90/201 (44.78%), Query Frame = 3 Query: 120 EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLD-LIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIF-------PYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 +F R+GV + K + K EG F+RG+ ++ + YE Y+ I+ S +V++ D I A T V T P+ L++T++ Q S+ + Y GI D ++T K G +GLY+G PSL+ F Y +KFYF + + + +I + SI+ L T YP VV Sbjct: 48 KFKRVGVIDTCKNVLKNEGIKQFWRGSSPTIVASGIAWGTYMHFYEAYKN-ILKSKYNVTQLNTFDHFICAVGASATQVFITNPIFLIKTRMQLQTPGSA-----------NYYTGIFDGIKKTVKVEGFKGLYKGVIPSLWLTFHGGIQMSSYEHIKFYFSSNSGKSLDSLNASEIFI---ASSISKFLASTILYPFQVV 233
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: S2540_DICDI (Mitochondrial substrate carrier family protein H OS=Dictyostelium discoideum GN=mcfH PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13 Identity = 58/237 (24.47%), Postives = 105/237 (44.30%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRI------GVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPV--LDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGV-------------VSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKR---------HVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 PL+ VK +QT+ H G + KKI K EG + F+RG S+ +P A +++ +Y EY + + F D + + L+AG+ A + T P +L+RT ++ ++ KN + +S+E + + +R G++GL+RG P+L P++ + + YE +K + + K + G+ +G L T P+DV+ Sbjct: 51 PLDVVKTRLQTQNTGSHINQKHVFKGTLDAFKKIYKNEGPLTFWRGVTPSLLMTIPSATIYFTSY-EYLKEYLYQFNDTEAYNIYTVPLVAGTLARIFSASVTSPFELLRTNSQGIVLQNAYKNTVAMAASSSTATIGTIPLSSEQRFNSFK-LYRDIVNNVGIKGLWRGLGPTLVRDVPFSAIYWAGYEVLKNKLMKSQIDPNFSRNSKSPFFINFIAGATSGTLAAVLTTPIDVI 285
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: MFRN_CAEBR (Mitoferrin OS=Caenorhabditis briggsae GN=CBG02884 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 48/142 (33.80%), Postives = 69/142 (48.59%), Query Frame = 3 Query: 171 EGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKL-AYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK 593 EG FYR +A VP+ A+H+M YE +++ +L+ P+ P LIAG AGG A T P+D V+T L Q ++ N + + A + YRGI D R Y + G+ G G + P L + YE K Sbjct: 162 EGFAAFYRSYTTQLAMNVPFQAIHFMGYEFWQQ--VLN-PEHKYDPKSHLIAGGLAGGLAAAVTTPMDCVKTVLNTQQAAEADPSNRRIFLKARYRYRGISDAVRTIYSQRGMAGFSCGLQARVIFQVPATALSWSVYELFK 300
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: YQ73_SCHPO (Uncharacterized mitochondrial carrier C1442.03 OS=Schizosaccharomyces pombe GN=SPCC1442.03 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.949e-13 Identity = 52/168 (30.95%), Postives = 77/168 (45.83%), Query Frame = 3 Query: 144 GSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSK---------------KNFQGVVSAEHVYR--GIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKR 596 G++K+IAK EG F+ G A++ R +P++ + YE+ R+ G +LI GS AG A T PLD+ +T+L I + K +N + +A V GIR YK GL GL+RG P ++ + L F FYE + R Sbjct: 160 GAVKQIAKQEGMKTFFYGYRATILRDIPFSGFQLLFYEKLRQVAQKECGQKDIGVFRELITGSLAGAGAGFLTTPLDVAKTRLQTMIRTTDKVSDDINSGRYFFAKDENSKSKSAASLVKPKIGIRHVLGGLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYEGIIR 327
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: TPC1_DEBHA (Mitochondrial thiamine pyrophosphate carrier 1 OS=Debaryomyces hansenii GN=TPC1 PE=3 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 8.949e-13 Identity = 57/215 (26.51%), Postives = 95/215 (44.19%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRI-GVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRG------PVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDI-MVKLACGSIAGLLGQTFTYPLDVV 698 PL+ +KI +Q + + G + I K EG ++GN + + Y A+ + +Y + + F +R LIAGS +G + FTYP DL+RT+LA ++E + + + Y+ G+ G +G P L + GL F+ Y E+ R ++K I ++ CG IAG + T+PLD + Sbjct: 43 PLDTIKIRLQLQIQGYDTYKGASKTFVSICKNEGVKALWKGNVPAEILYILYGAIQFTSYSALSK-ALSEFEKNNRNLFTISNSTHSLIAGSGSGLASTFFTYPFDLLRTRLA--------------ANSEAHFLSMSSTIKSIYEMHGIGGFCKGLTPGLLSVASSTGLMFWSY-ELAREFSNNYKDVIPFLEGFCGFIAGATAKGLTFPLDTL 241
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: AGC1_YEAST (Mitochondrial aspartate-glutamate transporter AGC1 OS=Saccharomyces cerevisiae GN=AGC1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 60/215 (27.91%), Postives = 95/215 (44.19%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHV----PEDHKKDIMVK----LACGSIAGLLGQTFTYPLDVV 698 P++ +K +Q +R+ + KI EG G Y G G + + P A+ + R + +S P ++I+G+ AG V+FT PL++V+ +L Q D +N Q + Q K+ GLRGLY G A L P++ + F Y +K+ + P D K +K L G+IAG+ T P DV+ Sbjct: 550 PIDFIKTRMQAQRSLAQYKNSIDCLLKIISREGIKGLYSGLGPQLIGVAPEKAIKLTVNDFMRNRLTDKNGKLSLFP--EIISGASAGACQVIFTNPLEIVKIRLQVQS-DYVGENIQQA----------NETATQIVKKLGLRGLYNGVAACLMRDVPFSAIYFPTYAHLKKDLFDFDPNDKTKRNRLKTWELLTAGAIAGMPAAFLTTPFDVI 751
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: YEA6_YEAST (Probable mitochondrial carrier YEL006W OS=Saccharomyces cerevisiae GN=YEL006W PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 51/201 (25.37%), Postives = 91/201 (45.27%), Query Frame = 3 Query: 126 HRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSF-AGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGS---------IAGLLGQTFTYPLDVV 698 H G FG+ I K EGA G Y+G +V +P +++ Y+ R++ + FP P L + + AG + + T P+ +V+T+L Q G+ Y+G D FR+ ++ G + LY G P+L G+ A ++F YE +K D+ + + ++ ++ T TYP +++ Sbjct: 80 HYKGFFGTFATIFKDEGAAGLYKGLQPTVLGYIPTLMIYFSVYDFCRKYSVDIFP---HSPFLSNASSAITAGAISTVATNPIWVVKTRLMLQ---------TGIGKYSTHYKGTIDTFRKIIQQEGAKALYAGLVPALLGMLNVA-IQFPLYENLKIRFGYSESTDVSTDVTSSNFQKLILASMLSKMVASTVTYPHEIL 267
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: S2540_XENTR (Solute carrier family 25 member 40 OS=Xenopus tropicalis GN=slc25a40 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 46/198 (23.23%), Postives = 92/198 (46.46%), Query Frame = 3 Query: 114 RAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDH---KKDIMVKLACGSIAGLLGQTFTYPLDVV 698 RA H G + +I + EG + G ++ VP +++ Y++ R +I S P+ R + L+AG+ A + PL+L+RTK+ Y+ + Y+ +R C + + + G L++G P++ P++ L ++ YE +K+ + + + + + G+++G + T P DVV Sbjct: 80 RAPGHFRGTTDAFVQIIRNEGIKSLWSGLPPTLVMAVPATVIYFTCYDQLRDILIRSMPE--RAEIASLVAGATARLWSATLISPLELIRTKMQYRPLS---------------YKELRQCIQSSVAKDGWLALWKGWGPTVLRDVPFSALYWHNYELVKQSLCQRYNTLQPTFAISFTAGAVSGSIAAIVTLPFDVV 260 The following BLAST results are available for this feature:
BLAST of FC930408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930408 ID=FC930408; Name=FC930408; organism=Citrus clementina; type=EST; length=698bpback to top |