FC930408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: GDC_BOVIN (Graves disease carrier protein OS=Bos taurus GN=SLC25A16 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.989e-37 Identity = 88/222 (39.64%), Postives = 125/222 (56.31%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTY-KESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKR----------HVPEDHKKDIMV-----KLACGSIAGLLGQTFTYPLDV 695 PL+RVK+L+Q + +GVF +++ + K EG +G Y+GNGA + RI PY A+ +MA+E Y+ +I + VS G V L+AGS AG TAV+ TYPLD+VR +LA+Q V EH Y GI F+ Y KE G G YRG P++ G+ PYAG+ F+ + +K P +++V L CG +AG + QT +YP DV Sbjct: 54 PLDRVKVLLQAHNHHYRHLGVFSTLRAVPKKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKT-LITTKLGVS-GHVHRLMAGSMAGMTAVICTYPLDMVRVRLAFQ------------VKGEHTYTGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSYAPTLLGRPSSDNPNVLVLKTHINLLCGGVAGAIAQTISYPFDV 261
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: GDC_HUMAN (Graves disease carrier protein OS=Homo sapiens GN=SLC25A16 PE=2 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 8.887e-37 Identity = 87/222 (39.19%), Postives = 124/222 (55.86%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTY-KESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK----RHVP-------EDHKKDIMVK----LACGSIAGLLGQTFTYPLDV 695 PL+RVK+L+Q + +GVF +++ + + EG +G Y+GNGA + RI PY A+ +MA+E Y+ I G V L+AGS AG TAV+ TYPLD+VR +LA+Q V EH Y GI F+ Y KE G G YRG P++ G+ PYAG+ F+ + +K H P D+ +++K L CG +AG + QT +YP DV Sbjct: 56 PLDRVKVLLQAHNHHYKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLG--ISGHVHRLMAGSMAGMTAVICTYPLDMVRVRLAFQ------------VKGEHSYTGIIHAFKTIYAKEGGFFGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSHAPTLLGRPSSDNPNVLVLKTHVNLLCGGVAGAIAQTISYPFDV 263
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: GDC_MOUSE (Graves disease carrier protein homolog OS=Mus musculus GN=Slc25a16 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.377e-36 Identity = 86/222 (38.74%), Postives = 123/222 (55.41%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTY-KESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKR----------HVPEDHKKDIMV-----KLACGSIAGLLGQTFTYPLDV 695 PL+RVK+L+Q + +GV +++ + + EG +G Y+GNGA + RI PY A+ +MA+E Y+ +I VS G V L+AGS AG TAV+ TYPLD+VR +LA+Q V EH Y GI F+ Y KE G G YRG P++ G+ PYAG+ F+ + +K P +++V L CG +AG + QT +YP DV Sbjct: 56 PLDRVKVLLQAHNRHYKHLGVLSTLRAVPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFITTKL-GVS-GHVHRLMAGSMAGMTAVICTYPLDVVRVRLAFQ------------VKGEHTYSGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSYAPALLGRPSSDNPNVLVLKTHINLLCGGVAGAIAQTISYPFDV 263
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: GDC_RAT (Graves disease carrier protein (Fragment) OS=Rattus norvegicus GN=Slc25a16 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.017e-32 Identity = 84/225 (37.33%), Postives = 120/225 (53.33%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGG---TAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTY-KESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKR----------HVPEDHKKDIMV-----KLACGSIAGLLGQTFTYPLDV 695 PL+RVK+L+Q + +GV ++ + + EG +G Y+GNGA + RI PY A+ +MA+E Y+ +I VS G V L+AGS AG TAV+ TYPLD+VR +LA+Q V EH Y GI F+ Y KE G G YRG P++ G+ PYA + F+ + +K P +++V L CG +A + QT +YP DV Sbjct: 56 PLDRVKVLLQAHNHHYKHLGVLSPLRAVPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFITTKL-GVS-GHVHRLMAGSMAGKMSMTAVICTYPLDVVRVRLAFQ------------VKGEHTYSGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYASVSFFTFGTLKSVGLSYAPTLLGRPSSDNPNVLVLKTHINLLCGGVARAIAQTISYPFDV 266
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: MCFB_DICDI (Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32 Identity = 73/215 (33.95%), Postives = 119/215 (55.35%), Query Frame = 3 Query: 78 PLERVKILVQT-------RRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKR-HVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 PLER+KIL Q ++ G+ S+K + TEG +GF++GNG +V RI PY+A+ +++YE+Y+ +++ + +L G AG T++L TYPLDL+R++L Q+ + Y GI D + +E G+ GLY+G S G+ PY + F YE +K+ +P+D ++ L G+I+G QT TYP+D++ Sbjct: 158 PLERLKILNQVGHMNLEQNAPKYKGRGIIQSLKTMYTTEGFIGFFKGNGTNVIRIAPYSAIQFLSYEKYKNFLLNNNDQTHLTTYENLFVGGAAGVTSLLCTYPLDLIRSRLTVQVFGNK-------------YNGIADTCKMIIREEGVAGLYKGLFASALGVAPYVAINFTTYENLKKTFIPKDTTPTVVQSLTFGAISGATAQTLTYPIDLI 359 HSP 2 Score: 92.4337 bits (228), Expect = 2.431e-18 Identity = 56/180 (31.11%), Postives = 88/180 (48.89%), Query Frame = 3 Query: 81 LERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKK 620 L R ++ VQ +++ G+ + K I + EG G Y+G AS + PY A+++ YE ++ I D + V L G+ +G TA TYP+DL+R +L QG+ + +Y G D FR+ ++ G+ GLY G P + P + F YE MK+ + D KK Sbjct: 264 LIRSRLTVQVFGNKYN--GIADTCKMIIREEGVAGLYKGLFASALGVAPYVAINFTTYENLKKTFIPK--DTTPTVVQSLTFGAISGATAQTLTYPIDLIRRRL----------QVQGIGGKDILYNGTFDAFRKIIRDEGVLGLYNGMIPCYLKVIPAISISFCVYEVMKKILKIDSKK 429
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: S2542_XENLA (Solute carrier family 25 member 42 OS=Xenopus laevis GN=slc25a42 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.504e-31 Identity = 75/212 (35.38%), Postives = 117/212 (55.19%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWI--ILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKD---IMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R KI+ Q F + I + +G + +RGN A++ R++PYAA+ + A+E+Y++ + F + P+ L+AG+ AG TA L TYPLDLVR ++A V+ + +Y I F + +E GL+ LYRG P++ G+ PYAG+ F+ YE +K+ E + +L G+ AGL GQ+ +YPLDVV Sbjct: 56 PLDRTKIIFQVSSNRFSAKEAYRLIYRTYMNDGFLSLWRGNSATMVRVIPYAAIQFCAHEQYKKLLGSYYGFQGSALTPIPRLLAGALAGTTATLLTYPLDLVRARMA--------------VTQKEMYSNIIHVFMRMSREEGLKSLYRGFTPTVLGVIPYAGISFFTYETLKKLHAEHSGRTQPYTFERLLFGACAGLFGQSSSYPLDVV 253
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: MCFP_DICDI (Mitochondrial substrate carrier family protein P OS=Dictyostelium discoideum GN=mcfP PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.271e-31 Identity = 80/212 (37.74%), Postives = 114/212 (53.77%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVP-----EDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 PLERVKIL Q + + V+GS+ KI + EG G +RGN A++ R+ PYAA+ +++YE + ++ +AGS AGG AV TYPLDL+R +LA +I K H+ + T+ + G++G+YRG P+L GI PY G+ F +E +KR P E+ + KL G IAG + QT YP DVV Sbjct: 34 PLERVKILYQIKSELYSLNSVYGSMLKIVENEGIKGLWRGNSATILRVFPYAAVQFLSYETIKNHLVAD----KSSSFQIFLAGSAAGGIAVCATYPLDLLRARLAIEIHKKPTK-------PHHL-------LKSTFTKDGVKGIYRGIQPTLIGILPYGGISFSTFEFLKRIAPLNEIDENGQISGTYKLIAGGIAGGVAQTVAYPFDVV 227
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: S2542_XENTR (Solute carrier family 25 member 42 OS=Xenopus tropicalis GN=slc25a42 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.272e-31 Identity = 75/212 (35.38%), Postives = 117/212 (55.19%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWI--ILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKD---IMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R KI+ Q F + I + EG + +RGN A++ R++PYAA+ + A+E+Y++ + F + P+ L+AG+ AG TA + TYPLDLVR ++A V+ + +Y I F + +E GL+ LYRG P++ G+ PYAG+ F+ YE +K+ E + +L G+ AGL GQ+ +YPLDVV Sbjct: 56 PLDRTKIIFQVSSNRFSAKEAYRLIYRTYLNEGFLSLWRGNSATMVRVIPYAAIQFCAHEQYKKLLGSYYGFQGSALTPIPRLLAGALAGTTATIITYPLDLVRARMA--------------VTPKEMYSNIIHVFMRMSREEGLKSLYRGFTPTVLGVIPYAGISFFTYETLKKLHAEHSGRTQPYPFERLLFGACAGLFGQSASYPLDVV 253
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: S2542_DANRE (Solute carrier family 25 member 42 OS=Danio rerio GN=slc25a42 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.272e-31 Identity = 77/212 (36.32%), Postives = 118/212 (55.66%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWI--ILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKR-HVPEDHKKDIM--VKLACGSIAGLLGQTFTYPLDVV 698 PL+R KI+ Q F + I + +G +RGN A++ R++PYAA+ + A+E+Y+ + F + PV L+AGS AG TA + TYPLD+VR ++A V+ + +Y I D F + +E GL+ LYRG P++ G+ PYAGL F+ YE +K+ H + + +L G+ AGL+GQ+ +YPLDVV Sbjct: 55 PLDRTKIIFQVSSNRFSAKEAYRLIYRTYLKDGFFSLWRGNSATMVRVIPYAAIQFCAHEQYKGILGKYYGFQGKALPPVPRLLAGSLAGTTAAIITYPLDMVRARMA--------------VTPKEMYSNIMDVFVRISREEGLKTLYRGFTPTILGVVPYAGLSFFTYETLKKTHAEKTGRAHPFPYERLVFGACAGLIGQSASYPLDVV 252
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: SCMC1_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 3.616e-30 Identity = 72/212 (33.96%), Postives = 116/212 (54.72%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKD-----IMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R+KI++Q ++ ++ +FG +++ K G +RGNG +V +I P A+ + AYE+Y++ +L+ G I+GS AG TA F YP+++++T+LA V Y GI DC ++ K GL Y+G P+L GI PYAG+ YE +K + ++ KD +MV L CG+++ GQ +YPL +V Sbjct: 214 PLDRLKIMMQVHGSKSDKMNIFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKK--LLTEEGQKIGTFERFISGSMAGATAQTFIYPMEVMKTRLA--------------VGKTGQYSGIYDCAKKILKHEGLGAFYKGYVPNLLGIIPYAGIDLAVYELLKSYWLDNFAKDSVNPGVMVLLGCGALSSTCGQLASYPLALV 409 HSP 2 Score: 75.485 bits (184), Expect = 3.076e-13 Identity = 48/158 (30.38%), Postives = 78/158 (49.37%), Query Frame = 3 Query: 135 GVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFP--DVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIV--DSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKR 596 G++ KKI K EG FY+G ++ I+PYA + YE + + + +F V+ G ++ L G+ + L +YPL LVRT++ Q + S + N G+ FR+ + G+ GLYRG P+ + P G+ + YE MK+ Sbjct: 326 GIYDCAKKILKHEGLGAFYKGYVPNLLGIIPYAGIDLAVYELLKSYWLDNFAKDSVNPGVMVLLGCGALSSTCGQLASYPLALVRTRMQAQAMLEGSPQLNMVGL-------------FRRIISKEGIPGLYRGITPNFMKVLPAVGISYVVYENMKQ 470 The following BLAST results are available for this feature:
BLAST of FC930408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930408 ID=FC930408; Name=FC930408; organism=Citrus clementina; type=EST; length=698bpback to top |