FC930408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: S2539_RAT (Solute carrier family 25 member 39 OS=Rattus norvegicus GN=Slc25a39 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 51/192 (26.56%), Postives = 88/192 (45.83%), Query Frame = 3 Query: 135 GVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHV-YRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKD---IMVKLACGSIAGLLGQTFTYPLDVV 698 G + KI + EG + G A++ VP A+++ AY++ + + L ++ ++AG+ A V PL+LVRTKL A+HV YR + C + + G R L+ G P+ P++ L ++ YE +K + +K+ + + G I+G++ T T P DVV Sbjct: 106 GTLDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYDQLKAF--LCGQSLTSDLYAPMVAGALARMGTVTVVSPLELVRTKL----------------QAQHVSYRELAACVQAAVAQGGWRSLWLGWGPTALRDVPFSALYWFNYELVKSQLNGPRQKEQTSVGISFVAGGISGMVAATLTLPFDVV 279
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: MCATL_MOUSE (Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Mus musculus GN=Slc25a29 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 56/210 (26.67%), Postives = 92/210 (43.81%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRI-GVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVK--LACGSIAGLLGQTFTYPLDVV 698 P + VK+ +Q + E + G + I K E +G Y+G G+ + + AL + R + P+ +AG+ AG + P++L +T+L Q V ++ Y+G DC Q Y+ GLRG+ RG +L P G+ F Y+ M R + + ++V L G +G+ TYP+DVV Sbjct: 21 PFDIVKVRLQVQSTEKPQYRGTLHCFQSIIKQESVLGLYKGLGSPLMGLTFINALVFGVQGNTLRAL------GQDSPLNQFLAGAAAGAIQCVICCPMELAKTRLQLQAVGPAR-----------TYKGSLDCLVQIYRHEGLRGINRGMVSTLLRETPSFGVYFLTYDVMTRAMGCEPGDRLLVPKLLLAGGTSGITSWLSTYPMDVV 213
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: S2538_RAT (Solute carrier family 25 member 38 OS=Rattus norvegicus GN=Slc25a38 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 55/215 (25.58%), Postives = 94/215 (43.72%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEF---HRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKR---HVPEDHKKDIM--VKLACGSIAGLLGQTFTYPLDVV 698 PL+ +K +QT + R+G+ K+ +TE +G ++G S+ R VP +++ +++ + P + V I G + A + P+ +V+T+ G S E VY +R Y G RGL+RG +L P++GL FY + + H ++ +M V +CG AG+L T P DV+ Sbjct: 67 PLDLLKTRLQTLQPSDVGPRRVGMLSVFLKVVRTETLLGLWKGMSPSIVRCVPGVGIYFGTLYSSKQYFLRGHPPTALESV---ILGMGSRSVAGVCMSPITVVKTRYE-----------SGAYSYESVYAALRSI----YCSEGSRGLFRGLTATLLRDAPFSGLYLMFYSQTRATVLHGADELDAALMPLVNFSCGVFAGILASLVTQPADVI 263
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: MCATL_BOVIN (Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Bos taurus GN=SLC25A29 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 56/210 (26.67%), Postives = 92/210 (43.81%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRI-GVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVK--LACGSIAGLLGQTFTYPLDVV 698 P + VK+ +Q + E + G + I K E +G YRG G+ + + AL + R + P+ +AG+ AG + P++L +T+L Q ++ YRG DC Q Y++ GLRG+ RG +L P G+ F Y+ + R + + ++V L G +G+ TYP+DVV Sbjct: 21 PFDTVKVRLQVQSVEKPQYRGTLHCFQAIIKQESVLGLYRGLGSPLLGLTFINALVFGVQGNTLRALGRD------SPLNQFLAGAAAGAIQCVICCPMELAKTRLQLQEAGPAR-----------TYRGPLDCLAQIYRQEGLRGVNRGMVSTLLRETPSFGVYFLTYDVLTRALGCEPGDRLLVPKLLLAGGTSGIASWLSTYPVDVV 213
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: CMC1_CAEEL (Probable calcium-binding mitochondrial carrier K02F3.2 OS=Caenorhabditis elegans GN=K02F3.2 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 41/126 (32.54%), Postives = 62/126 (49.21%), Query Frame = 3 Query: 321 IAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 + GS AG YP+DLV+T++ Q S F G V +Y+ DCF++ K GL GLYRG P + G+ P +K + M+ +D K + ++ G G+ FT PL++V Sbjct: 374 LLGSVAGACGATAVYPIDLVKTRMQNQRTSGS---FVGEV----MYKNSLDCFKKVVKFEGLLGLYRGLLPQIVGVAPEKAIKLTMNDYMRDKFTKDGKIPLYGEIIAGGTGGMCQVVFTNPLEIV 492
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: S2538_BOVIN (Solute carrier family 25 member 38 OS=Bos taurus GN=SLC25A38 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12 Identity = 49/217 (22.58%), Postives = 93/217 (42.86%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFH---RIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIM-------VKLACGSIAGLLGQTFTYPLDVV 698 PL+ +K +QT + H R+G+ + + +TE +G ++G S+ R VP +++ +++ + P + + +I G+ + A + P+ +++T+ S + Y + R G RGL+ G +L P++G+ FY + K V H+ D + V +CG AG+L T P DV+ Sbjct: 47 PLDLLKTRLQTLQPSAHGSRRVGMLALLLNVVRTESPLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQYFLRGHPPTA---LESIILGAGSRSVAGVCMSPITVIKTRYE---------------SGRYGYESVYAALRSICHSEGFRGLFSGLTATLLRDAPFSGIYLMFYSQTKNVVL--HRTDQLDAVLVPVVNFSCGIFAGILASLVTQPADVI 243
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: S2539_BOVIN (Solute carrier family 25 member 39 OS=Bos taurus GN=SLC25A39 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12 Identity = 56/196 (28.57%), Postives = 86/196 (43.88%), Query Frame = 3 Query: 135 GVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTY----PLDLVRTKLAYQIVDSSKKNFQGVVSAEHV-YRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKD---IMVKLACGSIAGLLGQTFTYPLDVV 698 G + KI + EG + G A++ VP A ++ AY++ + ++ R DL A AG A L T PL+LVRTKL A+H+ YR + C R + G R L+ G P+ P++ L ++ YE +K + KD + + G I+G++ T T P DVV Sbjct: 106 GTMDAFVKIVRHEGTRTLWSGLPATLVMTVPATAAYFTAYDQLKAFLC------GRALTSDLYAPMVAGALARLGTVTVISPLELVRTKL----------------QAQHLSYRELGTCVRAAVAQGGWRSLWLGWGPTALRDVPFSALYWFNYELVKSWLSGLRPKDQTSVGISFVAGGISGMVAATLTLPFDVV 279
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: MCATL_RAT (Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Rattus norvegicus GN=Slc25a29 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12 Identity = 54/210 (25.71%), Postives = 91/210 (43.33%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRI-GVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVK--LACGSIAGLLGQTFTYPLDVV 698 P + VK+ +Q + E + G + I K E +G Y+G G+ + + AL + R + P+ +AG+ AG + P++L +T+L Q ++ Y+G DC Q Y+ GLRG+ RG +L P G+ F Y+ + R + + ++V L G +G+ TYP+DVV Sbjct: 21 PFDTVKVRLQVQNTEKPQYRGTLHCFQSIIKQESVLGLYKGLGSPLMGLTFINALVFGVQGNTLRAL------GQDSPLNQFLAGAAAGAIQCVICCPMELAKTRLQLQAAGPAR-----------AYKGSLDCLVQIYRHEGLRGINRGMVSTLLRETPSFGVYFLTYDVLTRAMGCEPGDRLLVPKLLLAGGTSGITSWLSTYPMDVV 213
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: S2538_SHEEP (Solute carrier family 25 member 38 OS=Ovis aries GN=SLC25A38 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 50/217 (23.04%), Postives = 93/217 (42.86%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFH---RIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIM-------VKLACGSIAGLLGQTFTYPLDVV 698 PL+ +K +QT + H R+G+ + + +TE +G ++G S+ R VP +++ +++ + P + + +I G+ + A + P+ +++T+ S + Y+ I R G RGL+ G +L P++G+ FY + K V H D + V +CG AG+L T P DV+ Sbjct: 47 PLDLLKTRLQTLQPSAHGSRRVGMLALLLTVVRTESLLGLWKGMSPSIVRCVPGVGIYFGTLYSLKQYFLRGHPPTA---LESVILGAGSRSVAGVCMSPITVIKTRYE---------------SGRYGYQSIYAALRSICHSEGFRGLFSGLTATLLRDAPFSGIYLMFYSQTKNVVL--HSTDQLDAVLVPVVNFSCGIFAGILASLVTQPADVI 243
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: MCATL_HUMAN (Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Homo sapiens GN=SLC25A29 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 55/210 (26.19%), Postives = 91/210 (43.33%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRI-GVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVK--LACGSIAGLLGQTFTYPLDVV 698 P + VK+ +Q + E + G K I K E +G Y+G G+ + + AL + R + P+ +AG+ AG + P++L +T+L Q ++ Y+G DC Q Y GLRG+ RG +L P G+ F Y+ + R + + ++V L G +G++ TYP+DVV Sbjct: 21 PFDTVKVRLQVQSVEKPQYRGTLHCFKSIIKQESVLGLYKGLGSPLMGLTFINALVFGVQGNTLRAL------GHDSPLNQFLAGAAAGAIQCVICCPMELAKTRLQLQDAGPAR-----------TYKGSLDCLAQIYGHEGLRGVNRGMVSTLLRETPSFGVYFLTYDALTRALGCEPGDRLLVPKLLLAGGTSGIVSWLSTYPVDVV 213 The following BLAST results are available for this feature:
BLAST of FC930408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930408 ID=FC930408; Name=FC930408; organism=Citrus clementina; type=EST; length=698bpback to top |