FC930408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: SCM2B_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-B OS=Danio rerio GN=slc25a25b PE=3 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 8.337e-27 Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK-----RHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R+K+L+Q + +G+ G ++ + G +RGNG +V +I P +A+ +MAYE+ +R ++ + G + L++GS AG A YP+++++T+LA + Y GI DC + +K+ G+ Y+G P++ GI PYAG+ YE +K R + + V LACG+++ GQ +YPL +V Sbjct: 206 PLDRLKVLMQVHATRSNSMGIAGGFTQMIREGGLRSLWRGNGINVLKIAPESAIKFMAYEQIKR--LIGSNQETLGILERLVSGSLAGAIAQSSIYPMEVLKTRLA--------------LGRTGQYSGIADCAKHIFKKEGMTAFYKGYIPNMLGIIPYAGIDLAVYETLKNSWLQRFATDSADPGVFVLLACGTMSSTCGQLASYPLALV 401
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: SCM1B_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-B PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.089e-26 Identity = 64/212 (30.19%), Postives = 114/212 (53.77%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKD-----IMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R+K+++Q ++ + + +K++ K G +RGNG +V +I P A+ + AYE+Y++ + + G +AGS AG TA YP+++++T+LA V Y G+ DC ++ ++ G+R Y+G P++ GI PYAG+ YE +K + ++H KD ++V L CG+ + GQ +YPL ++ Sbjct: 214 PLDRLKVMMQVHGSKGNS-NIITGLKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQYKK--LFTSESGKLGTAERFVAGSLAGATAQTSIYPMEVLKTRLA--------------VGRTGQYSGMFDCAKKIMQKEGIRAFYKGYIPNILGIIPYAGIDLAIYETLKNYWLQNHAKDSANPGVLVLLGCGTASSTCGQLASYPLALI 408 HSP 2 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 52/176 (29.55%), Postives = 82/176 (46.59%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGP-VLDLIAGSFAGGTA-VLFTYPLDLVRTKLAYQ--IVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK 593 P+E +K + R + G+F KKI + EG FY+G ++ I+PYA + YE + + + + S P VL L+ A T L +YPL L+RT++ Q I + + N G+ FR+ + G GLYRG P+ + P + + YE+MK Sbjct: 307 PMEVLKTRLAVGRTGQYS-GMFDCAKKIMQKEGIRAFYKGYIPNILGIIPYAGIDLAIYETLKNYWLQNHAKDSANPGVLVLLGCGTASSTCGQLASYPLALIRTRMQAQASIEGAPQLNMGGL-------------FRKIVAKEGFLGLYRGIGPNFLKVLPAVSISYVVYEKMK 468
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: SCMC1_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.168e-26 Identity = 66/212 (31.13%), Postives = 115/212 (54.25%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKD-----IMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R+K+ +Q ++ ++I + K++ K G +RGNG +V +I P A+ +MAYE+Y++ +LS +AGS AG TA YP+++++T+L + +K Q Y G+ DC ++ ++ G++ Y+G P++ GI PYAG+ YE +K + KD ++V L CG+I+ GQ +YPL ++ Sbjct: 215 PLDRMKVFMQVHSSKTNKISLVNGFKQMIKEGGVASLWRGNGVNVIKIAPETAIKFMAYEQYKK--LLSKDGGKVQSHERFMAGSLAGATAQTAIYPMEVMKTRL------TLRKTGQ--------YSGMFDCAKKILRKEGVKAFYKGYVPNILGIIPYAGIDLAVYETLKNTWLSHYAKDTANPGVLVLLGCGTISSTCGQLASYPLALI 410 HSP 2 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 48/174 (27.59%), Postives = 83/174 (47.70%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRR-WIILSFPDVSRGPVLDLIA-GSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK 593 P+E +K + R+ + G+F KKI + EG FY+G ++ I+PYA + YE + W+ D + VL L+ G+ + L +YPL L+RT++ Q + S + + Q +S ++ ++ G GLYRG P+ + P + + YE M+ Sbjct: 309 PMEVMKTRLTLRKTGQYS-GMFDCAKKILRKEGVKAFYKGYVPNILGIIPYAGIDLAVYETLKNTWLSHYAKDTANPGVLVLLGCGTISSTCGQLASYPLALIRTRM--QAMASMEGSEQVSMS---------KLVKKIMQKEGFFGLYRGILPNFMKVIPAVSISYVVYEYMR 470
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: SCM1A_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-A PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 9.218e-26 Identity = 63/212 (29.72%), Postives = 113/212 (53.30%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKD-----IMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R+K+++Q + + + +K++ K G +RGNG +V +I P A+ + AYE+Y++ + + G IAGS AG TA YP+++++T+LA V Y G+ DC ++ ++ G+ Y+G P++ GI PYAG+ YE +K + +++ KD ++V L CG+++ GQ +YPL ++ Sbjct: 214 PLDRLKVMMQVHGTKGNS-NIITGLKQMVKEGGVRSLWRGNGVNVIKIAPETAMKFWAYEQYKK--LFTSESGKLGTAERFIAGSLAGATAQTSIYPMEVLKTRLA--------------VGKTGQYSGMFDCAKKIMQKEGILAFYKGYIPNILGIIPYAGIDLAIYETLKNYWLQNYAKDSANPGVLVLLGCGTVSSTCGQLASYPLALI 408 HSP 2 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 47/157 (29.94%), Postives = 77/157 (49.04%), Query Frame = 3 Query: 135 GVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGP-VLDLIA-GSFAGGTAVLFTYPLDLVRTKLAYQ--IVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK 593 G+F KKI + EG + FY+G ++ I+PYA + YE + + + ++ S P VL L+ G+ + L +YPL L+RT++ Q I + + N G+ FR+ + G GLY G AP+ + P + + YE+MK Sbjct: 325 GMFDCAKKIMQKEGILAFYKGYIPNILGIIPYAGIDLAIYETLKNYWLQNYAKDSANPGVLVLLGCGTVSSTCGQLASYPLALIRTRMQAQASIEGAPQLNMGGL-------------FRKIVAKEGFFGLYTGIAPNFLKVLPAVSISYVVYEKMK 468
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: SCM2A_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.204e-25 Identity = 67/212 (31.60%), Postives = 111/212 (52.36%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK-----RHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R+K+L+Q + + + + ++ K G +RGNG +V +I P AL +MAYE+ +R ++ + G +AGS AG A YP+++++T+LA +K Q Y+GI DC + K G+ Y+G P++ GI PYAG+ YE +K R+ E+ + V LACG+++ GQ +YPL ++ Sbjct: 206 PLDRLKVLMQVHGCQGKSMCLMSGLTQMIKEGGVRSLWRGNGINVIKIAPETALKFMAYEQIKR--VMGSSQETLGISERFVAGSLAGVIAQSTIYPMEVLKTRLAL------RKTGQ--------YKGISDCAKHILKTEGMSAFYKGYVPNMLGIIPYAGIDLAVYETLKNTWLQRYGTENADPGVFVLLACGTVSSTCGQLASYPLALI 401 HSP 2 Score: 70.4774 bits (171), Expect = 9.894e-12 Identity = 50/176 (28.41%), Postives = 83/176 (47.16%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGP-VLDLIA-GSFAGGTAVLFTYPLDLVRTKLAYQ--IVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK 593 P+E +K + R+ ++ G+ K I KTEG FY+G ++ I+PYA + YE + + + + P V L+A G+ + L +YPL L+RT++ Q + SS+ + G+ F+Q K G GLYRG P+ + P + + YE +K Sbjct: 300 PMEVLKTRLALRKTGQYK-GISDCAKHILKTEGMSAFYKGYVPNMLGIIPYAGIDLAVYETLKNTWLQRYGTENADPGVFVLLACGTVSSTCGQLASYPLALIRTRMQAQASVEGSSQVSMTGL-------------FKQIMKTEGPTGLYRGLTPNFLKVIPAVSISYVVYEHIK 461
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: YE08_SCHPO (Uncharacterized mitochondrial carrier C17H9.08 OS=Schizosaccharomyces pombe GN=SPAC17H9.08 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.054e-25 Identity = 83/229 (36.24%), Postives = 123/229 (53.71%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFH-----RIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGL------YRGAAPSLYGIFPYAGLKFYFYEEM-----KRHVPE-------DHKKDIMVKLACGSIAGLLGQTFTYPLDV 695 PL+RVKIL QT A + R G++ +IK I G G Y+G+ A++ R+ PYA + ++AYE+ RR +++ P+ ++GS AG +V FTYPL+L+R +LAY I ++ K V+ + + RD F K GL L YRG + +L GIFPYAG+ F Y+ K+ + E D K +L CG+ AG+ GQT +YP +V Sbjct: 37 PLDRVKILYQTNHASYRGYAYSRHGLYKAIKHIYHVYGLHGLYQGHTATLYRVFPYAGIKFVAYEQVRR-VLIRDPE-HETHARRFLSGSLAGTCSVFFTYPLELIRVRLAY-ITNTGKNPTLTQVTKDIFHE--RD-FLCNKKYPGLSRLSKICNFYRGFSVTLTGIFPYAGMSFLAYDLATDFFHKQKIDEWVSTKKSDKKLKTWPELLCGAFAGVCGQTVSYPFEV 259 HSP 2 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 45/127 (35.43%), Postives = 69/127 (54.33%), Query Frame = 3 Query: 321 IAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMV-KLACGSIAGLLGQTFTYPLDVV 698 IAG AG A PLD R K+ YQ ++ +++G + H G+ + Y GL GLY+G +LY +FPYAG+KF YE+++R + D + + + GS+AG FTYPL+++ Sbjct: 22 IAGGTAGCVAKSVVAPLD--RVKILYQ---TNHASYRGYAYSRH---GLYKAIKHIYHVYGLHGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHARRFLSGSLAGTCSVFFTYPLELI 140
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: SCMC2_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus tropicalis GN=slc25a25 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.503e-25 Identity = 66/212 (31.13%), Postives = 113/212 (53.30%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK-----RHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R+K+L+Q + + + + G ++ + G +RGNG +V +I P +A+ +MAYE+ +R I+ + G L+AGS AG A YP+++++T++A +K Q Y+G+ DC ++ + G+ Y+G P++ GI PYAG+ YE +K R+ + V LACG+I+ GQ +YPL +V Sbjct: 250 PLDRLKVLMQVHASRSNNMSMLGGFTQMIREGGIRSLWRGNGINVIKIAPESAIKFMAYEQMKR--IIGSDQETLGIHERLVAGSLAGVIAQSSIYPMEVLKTRMAL------RKTGQ--------YQGMLDCGKKILLKEGVSAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQRYATSSADPGVFVLLACGTISSTCGQLASYPLALV 445
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: SCMC2_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.575e-25 Identity = 65/212 (30.66%), Postives = 111/212 (52.36%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK-----RHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R+K+L+Q + + + + G + + G +RGNG +V +I P +A+ +MAYE+ +R I+ + G +AGS AG A YP+++++T++A +K Q Y+G+ DC ++ + GL Y+G P++ GI PYAG+ YE +K R+ + V LACG+++ GQ +YPL +V Sbjct: 251 PLDRLKVLMQVHASRSNNMSILGGFTHMIREGGFRSLWRGNGINVIKIAPESAIKFMAYEQIKR--IIGSNQETLGIHERFVAGSLAGVIAQSSIYPMEVLKTRMAL------RKTGQ--------YQGVLDCGKKILLQEGLSAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQRYATSSADPGVFVLLACGTVSSTCGQLASYPLALV 446
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: SCMC2_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Homo sapiens GN=SLC25A25 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.975e-25 Identity = 67/212 (31.60%), Postives = 113/212 (53.30%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK-----RHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R+K+L+Q + + +G+ G ++ + GA +RGNG +V +I P +A+ +MAYE+ +R ++ S + R L+AGS AG A YP+++++T++A +K Q Y G+ DC R+ G+ Y+G P++ GI PYAG+ YE +K + + V LACG+++ GQ +YPL +V Sbjct: 206 PLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKFMAYEQIKR-LVGSDQETLRIHE-RLVAGSLAGAIAQSSIYPMEVLKTRMAL------RKTGQ--------YSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQHYAVNSADPGVFVLLACGTMSSTCGQLASYPLALV 401
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: SCMC2_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Mus musculus GN=Slc25a25 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.803e-25 Identity = 68/212 (32.08%), Postives = 114/212 (53.77%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK-----RHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R+K+L+Q + + + + G ++ + GA +RGNG +V +I P +A+ +MAYE+ +R ++ S + R L+AGS AG A YP+++++T++A +K Q Y G+ DC R+ + G+ Y+G P++ GI PYAG+ YE +K R+ + V LACG+I+ GQ +YPL +V Sbjct: 206 PLDRLKVLMQVHASRSNNMCIVGGFTQMIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKR-LVGSDQETLRIHE-RLVAGSLAGAIAQSSIYPMEVLKTRMAL------RKTGQ--------YSGMLDCARRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALV 401 The following BLAST results are available for this feature:
BLAST of FC930408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930408 ID=FC930408; Name=FC930408; organism=Citrus clementina; type=EST; length=698bpback to top |