FC930408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: SCMC2_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Bos taurus GN=SLC25A25 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24 Identity = 68/212 (32.08%), Postives = 113/212 (53.30%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK-----RHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R+K+L+Q + + + + G ++ + GA +RGNG +V +I P +A+ +MAYE+ +R +I S + R L+AGS AG A YP+++++T++A +K Q Y G+ DC R+ G+ Y+G P++ GI PYAG+ YE +K R+ + V LACG+++ GQ +YPL +V Sbjct: 206 PLDRLKVLMQVHASRSNNMCIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKFMAYEQIKR-LIGSDQETLRIHE-RLVAGSLAGAIAQSSIYPMEVLKTRMAL------RKTGQ--------YSGMLDCARKILAREGMAAFYKGYVPNMLGIIPYAGIDLAVYETLKNAWLQRYAVNSADPGVFVLLACGTMSSTCGQLASYPLALV 401
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: SCMC1_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24 Identity = 63/212 (29.72%), Postives = 111/212 (52.36%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKD-----IMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R+K+++Q ++ + + +K++ K G +RGNG +V +I P A+ + AYE+Y++ + + G IAGS AG TA YP+++++T+LA V Y G+ DC ++ + G+R Y+G P++ GI PYAG+ YE +K +++ D ++V L CG+ + GQ +YPL ++ Sbjct: 214 PLDRLKVMMQVHGSKGNA-NIITGLKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQYKK--LFTSESGKLGTAERFIAGSLAGATAQTSIYPMEVLKTRLA--------------VGKTGQYSGMFDCAKKIMQREGVRAFYKGYIPNILGIIPYAGIDLAIYETLKTFWLQNYATDSANPGVLVLLGCGTASSTCGQLASYPLALI 408 HSP 2 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 49/157 (31.21%), Postives = 76/157 (48.41%), Query Frame = 3 Query: 135 GVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGP-VLDLIAGSFAGGTA-VLFTYPLDLVRTKLAYQ--IVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK 593 G+F KKI + EG FY+G ++ I+PYA + YE + + + ++ S P VL L+ A T L +YPL L+RT++ Q I + + N G+ FR+ + G GLYRG AP+ + P + + YE+MK Sbjct: 325 GMFDCAKKIMQREGVRAFYKGYIPNILGIIPYAGIDLAIYETLKTFWLQNYATDSANPGVLVLLGCGTASSTCGQLASYPLALIRTRMQAQASIEGAPQLNMGGL-------------FRKIVAKEGFFGLYRGIAPNFLKVLPAVSISYVVYEKMK 468
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: SCMC2_RAT (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Rattus norvegicus GN=Slc25a25 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24 Identity = 67/212 (31.60%), Postives = 114/212 (53.77%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK-----RHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R+K+L+Q + + + + G ++ + GA +RGNG +V +I P +A+ +MAYE+ +R ++ S + R L+AGS AG A YP+++++T++A +K Q Y G+ DC ++ + G+ Y+G P++ GI PYAG+ YE +K R+ + V LACG+I+ GQ +YPL +V Sbjct: 206 PLDRLKVLMQVHASRSNNMCIIGGFTQMIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKR-LVGSDQETLRIHE-RLVAGSLAGAIAQSSIYPMEVLKTRMAL------RKTGQ--------YSGMLDCAKRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALV 401
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: EAAC_ARATH (Probable envelope ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=EAAC PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.058e-24 Identity = 67/213 (31.46%), Postives = 107/213 (50.23%), Query Frame = 3 Query: 78 PLERVKILVQT------RRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R+K+L+QT +++ IG +I IAK EG G+++GN V R++PY+A+ +AYE Y+ + D + L AG+ AG T+ L TYPLD++R +LA E YR + ++ G+ Y G PSL GI PY + F ++ +K+ +PE+++K L ++ + YPLD V Sbjct: 107 PLDRIKLLMQTHGIRLGQQSAKKAIGFIEAITLIAKEEGVKGYWKGNLPQVIRVLPYSAVQLLAYESYKN--LFKGKDDQLSVIGRLAAGACAGMTSTLLTYPLDVLRLRLA----------------VEPRYRTMSQVALSMLRDEGIASFYYGLGPSLVGIAPYIAVNFCIFDLVKKSLPEEYRKKAQSSLLTAVLSAGIATLTCYPLDTV 301
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: CMC3_CAEEL (Probable calcium-binding mitochondrial carrier F17E5.2 OS=Caenorhabditis elegans GN=F17E5.2 PE=2 SV=4) HSP 1 Score: 109.768 bits (273), Expect = 1.472e-23 Identity = 59/211 (27.96%), Postives = 107/211 (50.71%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK----RHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 P +R+K+ +Q + +++GV + + G F+RGNG +V +I P +A+ +M Y++ +RW+ + L+AGS AG + YP+++++T+LA + K G+ + Y + G++ Y+G P+L GI PYAG+ YE +K ++ E + ++ LACG+ + GQ +YPL +V Sbjct: 264 PFDRIKVYLQVNSTKTNKLGVVSCVHLLHAEGGIKSFWRGNGINVIKIAPESAMKFMCYDQIKRWMQEYKGGAELSTIERLLAGSSAGAISQTAIYPMEVMKTRLALRRTGQLDK-------------GMFHFAHKMYTKEGIKCFYKGYLPNLLGIIPYAGIDLTVYESLKSMYTKYYTEHTEPGVLALLACGTCSSTCGQLASYPLALV 461
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: CMC3_CAEBR (Probable calcium-binding mitochondrial carrier CBG00135 OS=Caenorhabditis briggsae GN=CBG00135 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.922e-23 Identity = 61/211 (28.91%), Postives = 107/211 (50.71%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK----RHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 P +R+K+ +Q + +++GV + + G F+RGNG +V +I P +A+ +M+Y++ +RWI L AGS AG + YP+++++T+LA + + RG+ + Y + G+R Y+G P+L GI PYAG+ YE +K ++ E + ++ LACG+ + GQ +YPL +V Sbjct: 265 PFDRIKVYLQVNSTKTNKLGVVSCVHLLHAEGGLKSFWRGNGINVIKIAPESAMKFMSYDQIKRWIQEYKGGAELTTYERLFAGSSAGAISQTAIYPMEVMKTRLALR-------------RTGQLDRGMIHFAHKMYDKEGIRCFYKGYLPNLLGIIPYAGIDLTVYETLKSCYTQYYTEHTEPGVLALLACGTCSSTCGQLASYPLALV 462
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: CMC2_CAEEL (Putative calcium-binding mitochondrial carrier F55A11.4 OS=Caenorhabditis elegans GN=F55A11.4 PE=5 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.279e-23 Identity = 62/212 (29.25%), Postives = 106/212 (50.00%), Query Frame = 3 Query: 78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKR-----HVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 P +R+K+ +Q ++ +R+GV +K + G F+RGNG +V +I P +A+ +M Y++ +R I + L AGS AG + YP+++++T+LA + + RGI + Y + G+R Y+G P+L GI PYAG+ YE +KR + + ++ LACG+ + GQ +YP +V Sbjct: 268 PFDRIKVYLQVNSSKTNRLGVMSCLKLLHAEGGIKSFWRGNGINVIKIAPESAIKFMCYDQLKRLIQKKKGNEEISTFERLCAGSAAGAISQSTIYPMEVMKTRLALR-------------KTGQLDRGIIHFAHKMYTKEGIRCFYKGYLPNLIGIIPYAGIDLAIYETLKRTYVRYYETNSSEPGVLALLACGTCSSTCGQLSSYPFALV 466
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT2_BOVIN (ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=2 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 5.592e-23 Identity = 72/218 (33.03%), Postives = 110/218 (50.46%), Query Frame = 3 Query: 78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS----RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVK-LACGSIAGLLGQTFTYPLDVV 698 P+ERVK+L+Q + A + G+ + +I K +G + F+RGN A+V R P AL++ ++Y++ I L D R +L +G AG T++ F YPLD RT+LA + G AE +RG+ DC + YK G+RGLY+G S+ GI Y F Y+ K +P+ I + + S+ + G T +YP D V Sbjct: 28 PIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQ-IFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV---------GKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLT-SYPFDTV 234
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: TPC_MOUSE (Mitochondrial thiamine pyrophosphate carrier OS=Mus musculus GN=Slc25a19 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.539e-23 Identity = 67/221 (30.32%), Postives = 112/221 (50.68%), Query Frame = 3 Query: 78 PLERVKILVQTR---------RAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRH----VPEDHKKDIMVK-LACGSIAGLLGQTFTYPLDVV 698 PL+ +KI Q + A++H G+F + K+I + EG F++G+ + + Y A+ ++A+EE + + + + G + GTA L +P+D++RT+LA Q +Y +R+ R YK G Y+G P++ IFPYAGL+F Y +KR +P D K+ +K L CG +G++ +TFTYPLD++ Sbjct: 35 PLDVIKIRFQLQIERLCPSDPNAKYH--GIFQAAKQILQEEGPRAFWKGHVPAQILSIGYGAVQFLAFEELTELLYQANLYQTHQFSAHFVCGGLSAGTATLTVHPVDVLRTRLAAQ-------------GEPKIYNNLREAIRTMYKTEGPFVFYKGLTPTVIAIFPYAGLQFSCYRSLKRAYDWLIPPDGKQTGNLKNLLCGCGSGVISKTFTYPLDLI 240 HSP 2 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 52/150 (34.67%), Postives = 80/150 (53.33%), Query Frame = 3 Query: 147 SIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRR---WIILSFPDVSR-GPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYE 584 +I+ + KTEG FY+G +V I PYA L + Y +R W+I PD + G + +L+ G +G + FTYPLDL++ +L + ++ F V S YRG+ D +Q +E G RG ++G +PSL G F++YE Sbjct: 161 AIRTMYKTEGPFVFYKGLTPTVIAIFPYAGLQFSCYRSLKRAYDWLIP--PDGKQTGNLKNLLCGCGSGVISKTFTYPLDLIKKRLQVGGFEHARSAFGQVRS----YRGLLDLTQQVLQEEGTRGFFKGLSPSLMKAALSTGFMFFWYE 304
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: TAAC_ARATH (Thylakoid ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=TAAC PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.627e-22 Identity = 67/213 (31.46%), Postives = 104/213 (48.83%), Query Frame = 3 Query: 78 PLERVKILVQT------RRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698 PL+R+K+L+QT +++ IG +I I K EG G+++GN V RIVPY+A+ AYE Y++ + D + L AG+ AG T+ L TYPLD++R +LA E YR + +E G+ Y G PSL I PY + F ++ +K+ +PE +++ L +A + YPLD + Sbjct: 135 PLDRIKLLMQTHGVRAGQQSAKKAIGFIEAITLIGKEEGIKGYWKGNLPQVIRIVPYSAVQLFAYETYKK--LFRGKDGQLSVLGRLGAGACAGMTSTLITYPLDVLRLRLA----------------VEPGYRTMSQVALNMLREEGVASFYNGLGPSLLSIAPYIAINFCVFDLVKKSLPEKYQQKTQSSLLTAVVAAAIATGTCYPLDTI 329 The following BLAST results are available for this feature:
BLAST of FC930408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930408 ID=FC930408; Name=FC930408; organism=Citrus clementina; type=EST; length=698bpback to top |