FC930408

Overview
NameFC930408
Unique NameFC930408
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3552 contig Ccv1_Contig3552:189..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT2_HUMAN (ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 PE=1 SV=6)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 68/217 (31.34%), Postives = 106/217 (48.85%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS----RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + A      +    G+   + +I K +G + F+RGN A+V R  P  AL++   ++Y++ I L   D      R    +L +G  AG T++ F YPLD  RT+LA  +         G   AE  +RG+ DC  + YK  G++GLY+G   S+ GI  Y    F  Y+  K  +P+     I++          +    +YP D V
Sbjct:   28 PIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQ-IFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV---------GKAGAEREFRGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHIVISWMIAQTVTAVAGLTSYPFDTV 234          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT2_RAT (ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 2.775e-22
Identity = 70/218 (32.11%), Postives = 110/218 (50.46%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS----RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVK-LACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + A      +    G+   + +I K +G + F+RGN A+V R  P  AL++   ++Y++ I L   D      R    +L +G  AG T++ F YPLD  RT+LA  +         G   AE  ++G+ DC  + YK  G++GLY+G   S+ GI  Y    F  Y+  K  +P+     I +  +   S+  + G T +YP D V
Sbjct:   28 PIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQ-IFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV---------GKAGAEREFKGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLT-SYPFDTV 234          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT2_MOUSE (ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 2.775e-22
Identity = 70/218 (32.11%), Postives = 110/218 (50.46%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS----RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVK-LACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + A      +    G+   + +I K +G + F+RGN A+V R  P  AL++   ++Y++ I L   D      R    +L +G  AG T++ F YPLD  RT+LA  +         G   AE  ++G+ DC  + YK  G++GLY+G   S+ GI  Y    F  Y+  K  +P+     I +  +   S+  + G T +YP D V
Sbjct:   28 PIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQ-IFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV---------GKAGAEREFKGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLT-SYPFDTV 234          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT2_PONAB (ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22
Identity = 68/217 (31.34%), Postives = 106/217 (48.85%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS----RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + A      +    G+   + +I K +G + F+RGN A+V R  P  AL++   ++Y++ I L   D      R    +L +G  AG T++ F YPLD  RT+LA  +         G   AE  +RG+ DC  + YK  G++GLY+G   S+ GI  Y    F  Y+  K  +P+     I++          +    +YP D V
Sbjct:   28 PIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRHFPTQALNFAFKDKYKQ-IFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV---------GKAGAEREFRGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHIVISWMIAQTVTAVAGLTSYPFDTV 234          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT3_HUMAN (ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 PE=1 SV=4)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 69/217 (31.80%), Postives = 105/217 (48.39%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS----RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + A      +    G+   I +I K +G + F+RGN A+V R  P  AL++   ++Y++ I L   D      R    +L +G  AG T++ F YPLD  RT+LA  +         G    E  +RG+ DC  +  K  G+RGLY+G + S+ GI  Y    F  Y+  K  +P+     I+V          +    +YP D V
Sbjct:   28 PIERVKLLLQVQHASKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQ-IFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV---------GKSGTEREFRGLGDCLVKITKSDGIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTV 234          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT3_PIG (ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21
Identity = 69/217 (31.80%), Postives = 105/217 (48.39%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS----RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + A      +    G+   I +I K +G + F+RGN A+V R  P  AL++   ++Y++ I L   D      R    +L +G  AG T++ F YPLD  RT+LA  +         G  + E  ++G+ DC  +  K  G+RGLY+G   S+ GI  Y    F  Y   K  +P+     I+V          +   F+YP D V
Sbjct:   28 PIERVKLLLQVQHASKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQ-IFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV---------GKSATEREFKGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGVYGTAKGMLPDPRNTHIVVSWMIAQTVTAVAGVFSYPFDTV 234          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT3_BOVIN (ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21
Identity = 69/217 (31.80%), Postives = 105/217 (48.39%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS----RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + A      +    G+   I +I K +G + F+RGN A+V R  P  AL++   ++Y++ I L   D      R    +L +G  AG T++ F YPLD  RT+LA  +         G   +E  +RG+ DC  +  K  G+RGLY+G   S+ GI  Y    F  Y+  K  +P+     I+V          +    +YP D V
Sbjct:   28 PIERVKLLLQVQHASKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQ-IFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV---------GKSGSEREFRGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTV 234          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT1_RAT (ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc25a4 PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21
Identity = 68/217 (31.34%), Postives = 107/217 (49.31%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS----RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + A      E    G+   + +I K +G + F+RGN A+V R  P  AL++   ++Y++ I L   D      R    +L +G  AG T++ F YPLD  RT+LA  +         G  S++  + G+ DC  + +K  GL+GLY+G + S+ GI  Y    F  Y+  K  +P+     I+V          +    +YP D V
Sbjct:   28 PIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQ-IFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV---------GKGSSQREFNGLGDCLTKIFKSDGLKGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQSVTAVAGLVSYPFDTV 234          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT1_MOUSE (ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 PE=1 SV=4)

HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21
Identity = 68/217 (31.34%), Postives = 107/217 (49.31%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS----RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + A      E    G+   + +I K +G + F+RGN A+V R  P  AL++   ++Y++ I L   D      R    +L +G  AG T++ F YPLD  RT+LA  +         G  S++  + G+ DC  + +K  GL+GLY+G + S+ GI  Y    F  Y+  K  +P+     I+V          +    +YP D V
Sbjct:   28 PIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQ-IFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV---------GKGSSQREFNGLGDCLTKIFKSDGLKGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQSVTAVAGLVSYPFDTV 234          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT1_HUMAN (ADP/ATP translocase 1 OS=Homo sapiens GN=SLC25A4 PE=1 SV=4)

HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21
Identity = 68/219 (31.05%), Postives = 104/219 (47.49%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVL------DLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + A      E    G+   + +I K +G + F+RGN A+V R  P  AL++   ++Y++   L    V R          +L +G  AG T++ F YPLD  RT+LA  +         G  +A+  + G+ DC  + +K  GLRGLY+G   S+ GI  Y    F  Y+  K  +P+     I V          +    +YP D V
Sbjct:   28 PIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQ---LFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV---------GKGAAQREFHGLGDCIIKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIFVSWMIAQSVTAVAGLVSYPFDTV 234          
The following BLAST results are available for this feature:
BLAST of FC930408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
ADT2_HUMAN2.125e-2231.34ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 P... [more]
ADT2_RAT2.775e-2232.11ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc2... [more]
ADT2_MOUSE2.775e-2232.11ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 P... [more]
ADT2_PONAB3.625e-2231.34ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 P... [more]
ADT3_HUMAN1.377e-2131.80ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 P... [more]
ADT3_PIG1.799e-2131.80ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=... [more]
ADT3_BOVIN1.799e-2131.80ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=... [more]
ADT1_RAT1.799e-2131.34ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc2... [more]
ADT1_MOUSE1.799e-2131.34ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 P... [more]
ADT1_HUMAN4.008e-2131.05ADP/ATP translocase 1 OS=Homo sapiens GN=SLC25A4 P... [more]

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Properties
Property NameValue
Genbank descriptionC34007C04EF PostHarvC1 Citrus clementina cDNA clone C34007C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930408 ID=FC930408; Name=FC930408; organism=Citrus clementina; type=EST; length=698bp
CCGGGGGGCATGCCTGTGTGTGCAAGGAGCTGGTGGGCGGTGGGGTGGCT
GGTGGCTTCGGCAAGACTGCTGTTGGCCCACTTGAGCGCGTCAAGATTTT
GGTTCAGACTAGAAGAGCAGAATTTCACAGGATCGGAGTGTTTGGATCCA
TTAAGAAGATCGCAAAAACAGAAGGTGCTATGGGTTTCTACAGAGGAAAT
GGTGCTAGTGTAGCTCGAATTGTTCCATATGCAGCACTTCATTACATGGC
TTATGAGGAATATCGTAGATGGATTATCCTCAGTTTTCCTGATGTTAGCA
GAGGCCCTGTACTTGATCTCATAGCAGGATCTTTTGCTGGAGGAACTGCT
GTGCTGTTTACTTATCCTCTTGATTTAGTTCGAACAAAATTGGCTTATCA
GATTGTTGATTCATCAAAAAAGAACTTTCAAGGAGTAGTTAGTGCAGAAC
ATGTTTATAGAGGAATTCGCGATTGTTTTCGTCAGACTTACAAAGAGTCT
GGGCTTAGAGGTCTATATCGTGGTGCAGCTCCATCGCTCTATGGAATCTT
CCCATATGCTGGTTTGAAATTTTACTTCTACGAGGAGATGAAGCGCCATG
TCCCTGAGGATCACAAGAAAGATATAATGGTGAAACTTGCATGTGGATCC
ATCGCAGGTCTATTGGGTCAGACCTTCACGTACCCTCTTGATGTTGTT
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