FC930408

Overview
NameFC930408
Unique NameFC930408
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3552 contig Ccv1_Contig3552:189..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT1_RABIT (ADP/ATP translocase 1 OS=Oryctolagus cuniculus GN=SLC25A4 PE=2 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 6.836e-21
Identity = 68/217 (31.34%), Postives = 106/217 (48.85%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS----RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + A      E    G+   + +I K +G + F+RGN A+V R  P  AL++   ++Y++ I L   D      R    +L +G  AG T++ F YPLD  RT+LA  +         G  +A+  + G+ +C  + +K  GLRGLY+G   S+ GI  Y    F  Y+  K  +P+     I+V          +    +YP D V
Sbjct:   28 PIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQ-IFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV---------GKGAAQREFSGLGNCLTKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTV 234          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT1_BOVIN (ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=1 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 6.836e-21
Identity = 68/217 (31.34%), Postives = 106/217 (48.85%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS----RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + A      E    G+   + +I K +G + F+RGN A+V R  P  AL++   ++Y++ I L   D      R    +L +G  AG T++ F YPLD  RT+LA  +         G  +A+  + G+ +C  + +K  GLRGLY+G   S+ GI  Y    F  Y+  K  +P+     I+V          +    +YP D V
Sbjct:   28 PIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQ-IFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV---------GKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTV 234          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT_NEUCR (ADP,ATP carrier protein OS=Neurospora crassa GN=acp PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21
Identity = 68/218 (31.19%), Postives = 104/218 (47.71%), Query Frame = 3
Query:   78 PLERVKILVQTR-------RAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS---RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKR-HVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ER+K+LVQ +       R +    G+    K+    EG M  +RGN A+V R  P  AL++   +++++       DV    +    +L +G  AG T++LF Y LD  RT+LA     + K         E  + G+ D +R+T    G+ GLYRG  PS+ GI  Y GL F  Y+ +K   +  D K + +   A G          +YPLD +
Sbjct:   33 PIERIKLLVQNQDEMIRAGRLDRRYNGIIDCFKRTTADEGVMALWRGNTANVIRYFPTQALNFAFRDKFKKMFGYK-KDVDGYWKWMAGNLASGGAAGATSLLFVYSLDYARTRLANDAKSAKK-------GGERQFNGLVDVYRKTIASDGIAGLYRGFGPSVAGIVVYRGLYFGLYDSIKPVLLVGDLKNNFLASFALGWCVTTAAGIASYPLDTI 242          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: LEU5_YEAST (Mitochondrial carrier protein LEU5 OS=Saccharomyces cerevisiae GN=LEU5 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20
Identity = 74/253 (29.25%), Postives = 118/253 (46.64%), Query Frame = 3
Query:   78 PLERVKILVQTRRAEFHR-----IGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGL----------------YRGAAPSLYGIFPYAGLKFYFY-----------------------EEMKRHVPEDHKKDI--MVKLACGSIAGLLGQTFTYPLDVV 698
            PL+R+KIL QT    + +     IG+  + K I   +G  GF++G+ A++ RI PYAA+ ++AYE+ R  +I S    S      L++GS AG  +V  TYPLDLVR +LAY+               EH    +    ++ YKE     L                YRG  P++ G+ PYAG+ F+ +                       +E++R V +  ++ +    +L  G +AG+  QT  YP +++
Sbjct:   53 PLDRIKILFQTSNPHYTKYTGSLIGLVEAAKHIWINDGVRGFFQGHSATLLRIFPYAAVKFVAYEQIRNTLIPSKEFESHW--RRLVSGSLAGLCSVFITYPLDLVRVRLAYE--------------TEHKRVKLGRIIKKIYKEPASATLIKNDYIPNWFCHWCNFYRGYVPTVLGMIPYAGVSFFAHDLLHDVLKSPFFAPYSVLELSEDDELER-VQKKQRRPLRTWAELISGGLAGMASQTAAYPFEII 288          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT_SCHPO (ADP,ATP carrier protein OS=Schizosaccharomyces pombe GN=anc1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20
Identity = 61/183 (33.33%), Postives = 93/183 (50.82%), Query Frame = 3
Query:   78 PLERVKILVQTR-------RAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVL----DLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK 593
            P+ERVK+L+Q +       R      G+    K+ A  EG +  +RGN A+V R  P  AL++   +++++  +  +     G       +L +G  AG  ++LF Y LD  RT+LA     + K         E  + G+ D +R+TY+  GLRGLYRG  PS+ GI  Y GL F  Y+ +K
Sbjct:   47 PIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKK--MFGYKKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKK-------GGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLK 220          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT2_TACAC (ADP/ATP translocase 2 OS=Tachyglossus aculeatus aculeatus GN=SLC25A5 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20
Identity = 68/218 (31.19%), Postives = 107/218 (49.08%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS----RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVK-LACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + A      +    G+   + +I K +G + F+RGN A+V R  P  AL++   ++Y++ I L   D      R    +L +G  AG T++ F YPLD  RT+LA  +         G       ++G+ DC  +  K  G+RGLY+G   S+ GI  Y    F  Y+  K  +P+     I +  +   S+  + G T +YP D V
Sbjct:   28 PIERVKLLLQVQHASKQITADKQYKGIMDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQ-IFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADV---------GKAGDAREFKGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHIFISWMIAQSVTAVAGLT-SYPFDTV 234          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT1_YEAST (ADP,ATP carrier protein 1 OS=Saccharomyces cerevisiae GN=AAC1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20
Identity = 68/219 (31.05%), Postives = 106/219 (48.40%), Query Frame = 3
Query:   78 PLERVKILVQTRRAEFHR-------IGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVL----DLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDH-KKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q +     +        G+    K+ A  EG + F+RGN A+V R  P  AL++   ++ +   +LS+     G       +L +G  AGG ++LF Y LD  RT+LA     S         +++  + G+ D +++T K  GL GLYRG  PS+ GI  Y GL F  Y+  K  +     +   +     G +  +   T +YPLD V
Sbjct:   33 PIERVKLLMQNQEEMLKQGSLDTRYKGILDCFKRTATHEGIVSFWRGNTANVLRYFPTQALNFAFKDKIKS--LLSYDRERDGYAKWFAGNLFSGGAAGGLSLLFVYSLDYARTRLAADARGSKS-------TSQRQFNGLLDVYKKTLKTDGLLGLYRGFVPSVLGIIVYRGLYFGLYDSFKPVLLTGALEGSFVASFLLGWVITMGASTASYPLDTV 242          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT1_ANOGA (ADP,ATP carrier protein 1 OS=Anopheles gambiae GN=AGAP006782 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20
Identity = 66/217 (30.41%), Postives = 104/217 (47.93%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS----RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + A      +    G+     +I K +G   F+RGN A+V R  P  AL++ A+++  + + L   D +    R  + +L +G  AG T++ F YPLD  RT+L   +         G  + E  + G+ DC ++T K  G+ GLYRG   S+ GI  Y    F  ++  K  +P+     I V  A   +        +YP D V
Sbjct:   30 PIERVKLLLQVQAASKQIAVDKQYKGIVDCFVRIPKEQGIGAFWRGNLANVIRYFPTQALNF-AFKDVYKQVFLGGVDKNTQFWRYFLGNLGSGGAAGATSLCFVYPLDFARTRLGADV---------GRGAGEREFNGLLDCLKKTVKSDGIIGLYRGFNVSVQGIIIYRAAYFGCFDTAKGMLPDPKNTSIFVSWAIAQVVTTASGIISYPFDTV 236          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT_DICDI (Mitochondrial substrate carrier family protein ancA OS=Dictyostelium discoideum GN=ancA PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19
Identity = 64/217 (29.49%), Postives = 107/217 (49.31%), Query Frame = 3
Query:   78 PLERVKILVQTRRAEFHRI------GVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWII--LSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKR-HVPEDHKK-DIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + A           G+     +++K +G +  +RGN A+V R  P  AL++   ++Y+++ +   +  + ++  + +L++G  AG T++LF YPLD  RT+LA  +   S + F           G+ +C    YK  GL GLYRG   S+ GIF Y    F  Y+  K   + E++KK           +   +    +YP D V
Sbjct:   32 PIERVKLLLQVQSASTQIAADKQYKGIVDCFVRVSKEQGVISLWRGNLANVIRYFPTQALNFAFKDKYKKFFVRHTAKENPTKFFIGNLLSGGAAGATSLLFVYPLDFARTRLAADVGTGSARQF----------TGLGNCISSIYKRDGLIGLYRGFGVSVGGIFVYRAAFFGGYDTAKGILLGENNKKASFWASWGIAQVVTTIAGVVSYPFDTV 238          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT3_YEAST (ADP,ATP carrier protein 3 OS=Saccharomyces cerevisiae GN=AAC3 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19
Identity = 68/217 (31.34%), Postives = 103/217 (47.47%), Query Frame = 3
Query:   78 PLERVKILVQTRRAEFHR-------IGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVL--DLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHV-PEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVKIL+Q +     +        G+    K+ AK EG + F+RGN A+V R  P  AL++ A+++  + +     +   G     +L +G  AG  ++LF Y LD  RT+LA     S K            + G+ D +++T K  G+ GLYRG  PS+ GI  Y GL F  ++ +K  V         +     G +      T +YPLD V
Sbjct:   32 PIERVKILIQNQDEMIKQGTLDKKYSGIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALNF-AFKDKIKLMFGFKKEEGYGKWFAGNLASGGAAGALSLLFVYSLDFARTRLAADAKSSKK-------GGARQFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSLKPLVLTGSLDGSFLASFLLGWVVTTGASTCSYPLDTV 240          
The following BLAST results are available for this feature:
BLAST of FC930408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
ADT1_RABIT6.836e-2131.34ADP/ATP translocase 1 OS=Oryctolagus cuniculus GN=... [more]
ADT1_BOVIN6.836e-2131.34ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=... [more]
ADT_NEUCR8.928e-2131.19ADP,ATP carrier protein OS=Neurospora crassa GN=ac... [more]
LEU5_YEAST2.598e-2029.25Mitochondrial carrier protein LEU5 OS=Saccharomyce... [more]
ADT_SCHPO3.393e-2033.33ADP,ATP carrier protein OS=Schizosaccharomyces pom... [more]
ADT2_TACAC3.393e-2031.19ADP/ATP translocase 2 OS=Tachyglossus aculeatus ac... [more]
ADT1_YEAST7.558e-2031.05ADP,ATP carrier protein 1 OS=Saccharomyces cerevis... [more]
ADT1_ANOGA9.871e-2030.41ADP,ATP carrier protein 1 OS=Anopheles gambiae GN=... [more]
ADT_DICDI1.289e-1929.49Mitochondrial substrate carrier family protein anc... [more]
ADT3_YEAST1.289e-1931.34ADP,ATP carrier protein 3 OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionC34007C04EF PostHarvC1 Citrus clementina cDNA clone C34007C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930408 ID=FC930408; Name=FC930408; organism=Citrus clementina; type=EST; length=698bp
CCGGGGGGCATGCCTGTGTGTGCAAGGAGCTGGTGGGCGGTGGGGTGGCT
GGTGGCTTCGGCAAGACTGCTGTTGGCCCACTTGAGCGCGTCAAGATTTT
GGTTCAGACTAGAAGAGCAGAATTTCACAGGATCGGAGTGTTTGGATCCA
TTAAGAAGATCGCAAAAACAGAAGGTGCTATGGGTTTCTACAGAGGAAAT
GGTGCTAGTGTAGCTCGAATTGTTCCATATGCAGCACTTCATTACATGGC
TTATGAGGAATATCGTAGATGGATTATCCTCAGTTTTCCTGATGTTAGCA
GAGGCCCTGTACTTGATCTCATAGCAGGATCTTTTGCTGGAGGAACTGCT
GTGCTGTTTACTTATCCTCTTGATTTAGTTCGAACAAAATTGGCTTATCA
GATTGTTGATTCATCAAAAAAGAACTTTCAAGGAGTAGTTAGTGCAGAAC
ATGTTTATAGAGGAATTCGCGATTGTTTTCGTCAGACTTACAAAGAGTCT
GGGCTTAGAGGTCTATATCGTGGTGCAGCTCCATCGCTCTATGGAATCTT
CCCATATGCTGGTTTGAAATTTTACTTCTACGAGGAGATGAAGCGCCATG
TCCCTGAGGATCACAAGAAAGATATAATGGTGAAACTTGCATGTGGATCC
ATCGCAGGTCTATTGGGTCAGACCTTCACGTACCCTCTTGATGTTGTT
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