FC930408

Overview
NameFC930408
Unique NameFC930408
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT2_ANOGA (ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=AGAP002358 PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19
Identity = 67/217 (30.88%), Postives = 104/217 (47.93%), Query Frame = 3
Query:   78 PLERVKILVQTRR-----AEFHRI-GVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPD----VSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q +      AE  R  G+     +I + +G   F+RGN A+V R  P  AL++   ++Y++ + L   D     +R  + +L +G  AG T++ F YPLD  RT+LA  +         G  +    ++G+ DC  + +K  GL GLYRG   S+ GI  Y    F FY+  +  +P        V  A       +    +YP D V
Sbjct:   30 PIERVKLLLQVQHISKQIAEADRYKGMVDCFVRIPREQGFSAFWRGNLANVIRYFPTQALNFAFKDKYKQ-VFLGGVDKNTQFTRYFIGNLASGGMAGATSLCFVYPLDFARTRLAADV---------GKGAEAREFKGLGDCISKIFKTDGLVGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPNPKTTPWYVSWAIAQCVTTVAGIVSYPFDTV 236          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: TPC1_NEUCR (Mitochondrial thiamine pyrophosphate carrier 1 OS=Neurospora crassa GN=tpc-1 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.751e-19
Identity = 59/192 (30.73%), Postives = 88/192 (45.83%), Query Frame = 3
Query:  135 GVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGP----VLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            G   +I+ I +TEG  G ++GN  +    V YAA+ +  Y    +++  +FP          V   IAG+ AGG A   TYPLDL+RT+ A Q               E VY  +    +  Y   G+ G +RG  P L  I PY G  F  YE ++  + +            G +A ++ +T T+PLD+V
Sbjct:   70 GTLPTIRHILRTEGLTGLWKGNIPAELLYVSYAAVQFTTYRSITQFLQAAFPKDQNKQLPPSVESFIAGASAGGVATAVTYPLDLLRTRFAAQ-------------GVERVYPSLVQALKTIYASEGVTGYFRGLGPGLAQIIPYMGTFFCVYETLRPRLSKLELPYSSGSAVAGVLASVMAKTGTFPLDLV 248          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT_DROME (ADP,ATP carrier protein OS=Drosophila melanogaster GN=sesB PE=2 SV=4)

HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19
Identity = 64/217 (29.49%), Postives = 104/217 (47.93%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS----RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q +        +    G+     +I K +G   F+RGN A+V R  P  AL++   ++Y++ + L   D +    R    +L +G  AG T++ F YPLD  RT+LA    D+ K         +  + G+ +C  + +K  G+ GLYRG   S+ GI  Y    F FY+  +  +P+     I +  A   +   +    +YP D V
Sbjct:   43 PIERVKLLLQVQHISKQISPDKQYKGMVDCFIRIPKEQGFSSFWRGNLANVIRYFPTQALNFAFKDKYKQ-VFLGGVDKNTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLA---ADTGK-------GGQREFTGLGNCLTKIFKSDGIVGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKNTPIYISWAIAQVVTTVAGIVSYPFDTV 248          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: TPC_MACFA (Mitochondrial thiamine pyrophosphate carrier OS=Macaca fascicularis GN=SLC25A19 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.398e-19
Identity = 60/210 (28.57%), Postives = 105/210 (50.00%), Query Frame = 3
Query:   81 LERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKR----HVPEDHKK-DIMVKLACGSIAGLLGQTFTYPLDV 695
            L+  ++  +   A++H  G+F + ++I + EG   F++G+  +    + Y A+ ++++E     +       +R   +  + G  A  TA L  +P+D++RT+ A Q                 VY  +R      Y+  G +  Y+G AP+L  IFPYAGL+F  Y  +K      +P + KK + +  L CGS AG++ +T TYPLD+
Sbjct:   45 LQHERLSRRDPNAKYH--GIFQASRQILQEEGLTAFWKGHIPAQILSIGYGAVQFLSFEMLTELVHRGSVYDAREFSVHFVCGGLAACTATLTVHPVDVLRTRFAAQ-------------GEPKVYNTLRHAVGTMYRSEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAMPAEGKKNENLQNLLCGSGAGVISKTLTYPLDL 239          

HSP 2 Score: 68.9366 bits (167), Expect = 2.879e-11
Identity = 41/142 (28.87%), Postives = 69/142 (48.59%), Query Frame = 3
Query:  165 KTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGP--VLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYE 584
            ++EG   FY+G   ++  I PYA L +  Y   +     + P   +    + +L+ GS AG  +   TYPLDL + +L     + ++  F  V      Y+G+ DC +Q  ++ G  G ++G +PSL       G  F++YE
Sbjct:  167 RSEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAMPAEGKKNENLQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEHARAAFGQV----RRYKGLMDCAKQVLQKEGALGFFKGLSPSLLKAALSTGFMFFWYE 304          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT4_MACFA (ADP/ATP translocase 4 OS=Macaca fascicularis GN=SLC25A31 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19
Identity = 61/216 (28.24%), Postives = 100/216 (46.30%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS---RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + +      E    G+   + +I + +G   F+RGN A+V R  P  AL++   ++Y++  +          R  + +L +G  AG T++   YPLD  RT+L   I         G    E  ++G+ DC  +  K  G+ GLY+G   S+ GI  Y    F  Y+ +K  +P+  K   +V      +        +YP D V
Sbjct:   40 PIERVKLLLQVQASSKQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDI---------GKGPEERQFKGLGDCIMKIAKSDGIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILSYPFDTV 246          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT4_HUMAN (ADP/ATP translocase 4 OS=Homo sapiens GN=SLC25A31 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19
Identity = 61/216 (28.24%), Postives = 100/216 (46.30%), Query Frame = 3
Query:   78 PLERVKILVQTRRA------EFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVS---RGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q + +      E    G+   + +I + +G   F+RGN A+V R  P  AL++   ++Y++  +          R  + +L +G  AG T++   YPLD  RT+L   I         G    E  ++G+ DC  +  K  G+ GLY+G   S+ GI  Y    F  Y+ +K  +P+  K   +V      +        +YP D V
Sbjct:   40 PIERVKLLLQVQASSKQISPEARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDI---------GKGPEERQFKGLGDCIMKIAKSDGIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILSYPFDTV 246          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT2_YEAST (ADP,ATP carrier protein 2 OS=Saccharomyces cerevisiae GN=AAC2 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19
Identity = 64/216 (29.63%), Postives = 101/216 (46.76%), Query Frame = 3
Query:   78 PLERVKILVQTRRAEFHR-------IGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPD-VSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK-RHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q +     +        G+    K+ A  EG + F+RGN A+V R  P  AL++   ++ +        +  ++    +L +G  AG  ++LF Y LD  RT+LA     S K            + G+ D +++T K  G+ GLYRG  PS+ GI  Y GL F  Y+ +K   +    +   +     G +      T +YPLD V
Sbjct:   43 PIERVKLLIQNQDEMLKQGTLDRKYAGILDCFKRTATQEGVISFWRGNTANVIRYFPTQALNFAFKDKIKAMFGFKKEEGYAKWFAGNLASGGAAGALSLLFVYSLDYARTRLAADSKSSKK-------GGARQFNGLIDVYKKTLKSDGVAGLYRGFLPSVVGIVVYRGLYFGMYDSLKPLLLTGSLEGSFLASFLLGWVVTTGASTCSYPLDTV 251          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: BT1_MAIZE (Protein brittle-1, chloroplastic/amyloplastic OS=Zea mays GN=BT1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18
Identity = 56/191 (29.32%), Postives = 95/191 (49.74%), Query Frame = 3
Query:  144 GSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSRGPV-LDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKRHVPEDHKK----DI--MVKLACGSIAGLLGQTFTYPLDV 695
            G  + I + EG  G +RGN  +V R+ P  A+ +  Y+  ++++     +  + P+   L+AG+ AG  + L TYP++L++T++  +               + VY  +   F +  ++ G   LYRG  PSL G+ PYA   FY YE +KR       +    D+  +  L  GS AG +  + T+PL+V
Sbjct:  174 GVFQWIMQNEGWTGLFRGNAVNVLRVAPSKAIEHFTYDTAKKFLTPKGDEPPKIPIPTPLVAGALAGFASTLCTYPMELIKTRVTIE---------------KDVYDNVAHAFVKILRDEGPSELYRGLTPSLIGVVPYAACNFYAYETLKRLYRRATGRRPGADVGPVATLLIGSAAGAIASSATFPLEV 349          

HSP 2 Score: 83.1889 bits (204), Expect = 1.475e-15
Identity = 55/176 (31.25%), Postives = 80/176 (45.45%), Query Frame = 3
Query:   78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSF---PDVSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKR 596
            P+E +K  V   +  +  +    +  KI + EG    YRG   S+  +VPYAA ++ AYE  +R    +    P    GPV  L+ GS AG  A   T+PL++ R ++             G V    VY+ +        K+ G  GLYRG  PS   + P AG+ F  YE  K+
Sbjct:  249 PMELIKTRVTIEKDVYDNVA--HAFVKILRDEGPSELYRGLTPSLIGVVPYAACNFYAYETLKRLYRRATGRRPGADVGPVATLLIGSAAGAIASSATFPLEVARKQMQV-----------GAVGGRQVYQNVLHAIYCILKKEGAGGLYRGLGPSCIKLMPAAGIAFMCYEACKK 411          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: ADT_KLULA (ADP,ATP carrier protein OS=Kluyveromyces lactis GN=AAC PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18
Identity = 64/216 (29.63%), Postives = 100/216 (46.30%), Query Frame = 3
Query:   78 PLERVKILVQTRRAEFHR-------IGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPD-VSRGPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMK-RHVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            P+ERVK+L+Q +     +        G+    K+ A  EG   F+RGN A+V R  P  AL++   ++ +        +  ++    +L +G  AGG ++LF Y LD  RT+LA     + K         E  + G+ D +++T    G+ GLYRG  PS+ GI  Y GL F  Y+ +K   +    +   +     G        T +YPLD V
Sbjct:   30 PIERVKLLIQNQDEMIKQGSLDRRYTGIVECFKRTAADEGVASFWRGNTANVIRYFPTQALNFAFKDKIKAMFGFKKEEGYAKWFAGNLASGGLAGGLSLLFVYSLDYARTRLAADSKSAKK-------GGERQFNGLVDVYKKTLASDGVAGLYRGFLPSVVGIVVYRGLYFGLYDSLKPLLLTGSLENSFLASFLLGWAVTTGASTASYPLDTV 238          
BLAST of FC930408 vs. ExPASy Swiss-Prot
Match: S2543_MOUSE (Solute carrier family 25 member 43 OS=Mus musculus GN=Slc25a43 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.862e-18
Identity = 56/210 (26.67%), Postives = 102/210 (48.57%), Query Frame = 3
Query:   78 PLERVKILVQTRRAEFHRIGVFGSIKKIAKTEGAMGFYRGNGASVARIVPYAALHYMAYEEYRRWIILSFPDVSR-GPVLDLIAGSFAGGTAVLFTYPLDLVRTKLAYQIVDSSKKNFQGVVSAEHVYRGIRDCFRQTYKESGLRGLYRGAAPSLYGIFPYAGLKFYFYEEMKR--HVPEDHKKDIMVKLACGSIAGLLGQTFTYPLDVV 698
            PLE   +L Q  + + H +G++ + +++  +EG    ++GNG +  R+ P + +   A   YR++++L   D+ R      ++ GS AG  + + TYP DL++T+L  Q V             E  YRG+   F   Y++ G   LYRG + ++ G  P++      Y  +++  + P D    +    A   +A  + QT ++P D V
Sbjct:   32 PLELATVLAQVGKVQSHSLGLWATGRRVWLSEGPRALWKGNGVACLRLFPCSMVQLAA---YRKFVVLFMDDLGRISQWSSIVTGSLAGMVSTIVTYPTDLIKTRLMVQNV------------LEPSYRGLIHAFSTIYQQEGFLALYRGVSLTVLGAVPFSAGSLLVYMNLEKVWNGPRDRFSHLQ-NFANVCVAAAVSQTLSFPFDTV 225          
The following BLAST results are available for this feature:
BLAST of FC930408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
ADT2_ANOGA1.289e-1930.88ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=... [more]
TPC1_NEUCR3.751e-1930.73Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
ADT_DROME4.899e-1929.49ADP,ATP carrier protein OS=Drosophila melanogaster... [more]
TPC_MACFA6.398e-1928.57Mitochondrial thiamine pyrophosphate carrier OS=Ma... [more]
ADT4_MACFA8.357e-1928.24ADP/ATP translocase 4 OS=Macaca fascicularis GN=SL... [more]
ADT4_HUMAN8.357e-1928.24ADP/ATP translocase 4 OS=Homo sapiens GN=SLC25A31 ... [more]
ADT2_YEAST8.357e-1929.63ADP,ATP carrier protein 2 OS=Saccharomyces cerevis... [more]
BT1_MAIZE1.091e-1829.32Protein brittle-1, chloroplastic/amyloplastic OS=Z... [more]
ADT_KLULA1.091e-1829.63ADP,ATP carrier protein OS=Kluyveromyces lactis GN... [more]
S2543_MOUSE1.862e-1826.67Solute carrier family 25 member 43 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionC34007C04EF PostHarvC1 Citrus clementina cDNA clone C34007C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930408 ID=FC930408; Name=FC930408; organism=Citrus clementina; type=EST; length=698bp
CCGGGGGGCATGCCTGTGTGTGCAAGGAGCTGGTGGGCGGTGGGGTGGCT
GGTGGCTTCGGCAAGACTGCTGTTGGCCCACTTGAGCGCGTCAAGATTTT
GGTTCAGACTAGAAGAGCAGAATTTCACAGGATCGGAGTGTTTGGATCCA
TTAAGAAGATCGCAAAAACAGAAGGTGCTATGGGTTTCTACAGAGGAAAT
GGTGCTAGTGTAGCTCGAATTGTTCCATATGCAGCACTTCATTACATGGC
TTATGAGGAATATCGTAGATGGATTATCCTCAGTTTTCCTGATGTTAGCA
GAGGCCCTGTACTTGATCTCATAGCAGGATCTTTTGCTGGAGGAACTGCT
GTGCTGTTTACTTATCCTCTTGATTTAGTTCGAACAAAATTGGCTTATCA
GATTGTTGATTCATCAAAAAAGAACTTTCAAGGAGTAGTTAGTGCAGAAC
ATGTTTATAGAGGAATTCGCGATTGTTTTCGTCAGACTTACAAAGAGTCT
GGGCTTAGAGGTCTATATCGTGGTGCAGCTCCATCGCTCTATGGAATCTT
CCCATATGCTGGTTTGAAATTTTACTTCTACGAGGAGATGAAGCGCCATG
TCCCTGAGGATCACAAGAAAGATATAATGGTGAAACTTGCATGTGGATCC
ATCGCAGGTCTATTGGGTCAGACCTTCACGTACCCTCTTGATGTTGTT
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