FC930567
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_ASHGO (ATP-dependent RNA helicase DBP2 OS=Ashbya gossypii GN=DBP2 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.239e-15 Identity = 39/86 (45.35%), Postives = 58/86 (67.44%), Query Frame = 2 Query: 470 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR--HWCL 721 +++MS + RK+ + + G D+P PI+ F + FPE +LK++K +G +PT IQ QG P+ LSGRDMIG+A TGSG+ +CL Sbjct: 85 VQKMSTDEVEQFRKENEMKIVGHDVPKPIRTFDEAGFPEYVLKEVKEEGFEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCL 170
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_CANGA (ATP-dependent RNA helicase DBP2 OS=Candida glabrata GN=DBP2 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.064e-14 Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 2 Query: 470 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR--HWCL 721 +R S + RK+ + + G DIP PI F + FP+ +LK++KA+G +PT IQ QG P+ LSGRDM+GIA TGSG+ +CL Sbjct: 81 VRNRSDQEVAQFRKESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQGWPMALSGRDMVGIAATGSGKTLSYCL 166
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: RH30_ARATH (DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana GN=RH30 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.371e-14 Identity = 36/80 (45.00%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 470 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR 709 ++ M+++ + R + I V+G D+P P+K F+D FP+ IL+ + G +PTPIQ QG P+ L GRD+IGIA TGSG+ Sbjct: 136 VQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGK 215
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_CANAL (ATP-dependent RNA helicase DBP2 OS=Candida albicans GN=DBP2 PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.096e-14 Identity = 40/82 (48.78%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 482 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR--HWCL 721 S + + RK+ + V G DIP PI F + FP+ +L+++K +G +PTPIQ QG P+ LSGRDMIGIA TGSG+ +CL Sbjct: 102 SDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCL 183
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: RH30_ORYSJ (DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica GN=Os01g0911100 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.044e-14 Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 2 Query: 470 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR 709 ++ MS R+Q I V+G D+P P++ F++ FP+ ++ + G V+PTPIQ QG P+ L GRDMIGIA TGSG+ Sbjct: 222 VQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGK 301
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_EMENI (ATP-dependent RNA helicase dbp2 OS=Emericella nidulans GN=dbp2 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.281e-14 Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 482 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR--HWCL 721 S++ D RK+ + V G D+P P++ F + FP+ +L ++KA+G +PT IQ QG P+ LSGRD++GIA TGSG+ +CL Sbjct: 115 SQREVDEFRKKCEMTVQGRDVPRPVETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCL 196
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_AJECN (ATP-dependent RNA helicase DBP2 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=DBP2 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.281e-14 Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 470 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR 709 + + S D RK+ I V G+++P P++ F + FP+ ++ ++KA+G +PT IQ QG P+ LSGRD++GIA TGSG+ Sbjct: 96 VSQRSTHEVDAFRKEHEITVQGKNVPRPVETFDEAGFPQYVMSEVKAQGFARPTAIQAQGWPMALSGRDVVGIAETGSGK 175
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_VANPO (ATP-dependent RNA helicase DBP2 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DBP2 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 37/86 (43.02%), Postives = 58/86 (67.44%), Query Frame = 2 Query: 470 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR--HWCL 721 ++ S + + R++ + + G DIP PI +F + FP+ +L+++KA+G +PT IQ QG P+ LSGRDMIG+A TGSG+ +CL Sbjct: 84 VKARSDQEINEFRREHEMTITGHDIPKPITSFDEAGFPDYVLEEVKAEGFEKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCL 169
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_ASPOR (ATP-dependent RNA helicase dbp2 OS=Aspergillus oryzae GN=dbp2 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 37/86 (43.02%), Postives = 59/86 (68.60%), Query Frame = 2 Query: 470 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR--HWCL 721 + S++ D RK++ + V G++IP P++ F + FP+ +L ++KA+G +PT IQ QG P+ LSGRD++GIA TGSG+ +CL Sbjct: 101 VANRSQRDVDEFRKKFEMSVQGKNIPRPVETFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCL 186
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_KLULA (ATP-dependent RNA helicase DBP2 OS=Kluyveromyces lactis GN=DBP2 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14 Identity = 37/86 (43.02%), Postives = 56/86 (65.12%), Query Frame = 2 Query: 470 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR--HWCL 721 + +MS+ RK+ + + G D+P PI++F + FP +L ++K +G +PT IQ QG P+ LSGRDMIG+A TGSG+ +CL Sbjct: 84 VAQMSESEVIEFRKENEMTISGHDVPKPIRSFDEAGFPSYVLDEVKQEGFAKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCL 169 The following BLAST results are available for this feature:
BLAST of FC930567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930567 ID=FC930567; Name=FC930567; organism=Citrus clementina; type=EST; length=744bpback to top |