FC930567
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_DEBHA (ATP-dependent RNA helicase DBP2 OS=Debaryomyces hansenii GN=DBP2 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14 Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 2 Query: 506 RKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR--HWCL 721 RK+ + DG DIP PI +F + FP+ +LK++K +G +PT IQ QG P+ LSGRDM+GIA TGSG+ +CL Sbjct: 88 RKEHDMKCDGTDIPKPITSFDEAGFPDYVLKEVKQQGFPKPTSIQCQGWPMALSGRDMVGIASTGSGKTLSYCL 161
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_YEAST (ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae GN=DBP2 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 2 Query: 470 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR--HWCL 721 +R S RK+ + + G DIP PI F + FP+ +L ++KA+G +PT IQ QG P+ LSGRDM+GIA TGSG+ +CL Sbjct: 84 VRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCL 169
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_YEAS7 (ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP2 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 2 Query: 470 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR--HWCL 721 +R S RK+ + + G DIP PI F + FP+ +L ++KA+G +PT IQ QG P+ LSGRDM+GIA TGSG+ +CL Sbjct: 84 VRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCL 169
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_NEOFI (ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13 Identity = 34/76 (44.74%), Postives = 54/76 (71.05%), Query Frame = 2 Query: 482 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR 709 S++ + RK+ + V G ++P P++NF + FP+ +L ++KA+G +PT IQ QG P+ LSGRD++GIA TGSG+ Sbjct: 94 SEREVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGK 169
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_COCIM (ATP-dependent RNA helicase DBP2 OS=Coccidioides immitis GN=DBP2 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13 Identity = 33/80 (41.25%), Postives = 55/80 (68.75%), Query Frame = 2 Query: 470 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR 709 + S + + RK+ + V G+++P P++ F + FP+ ++ ++KA+G +PTPIQ QG P+ LSGRD++GIA TGSG+ Sbjct: 96 VTNRSAQDVEAFRKEHEMTVYGKNVPRPVETFDEAGFPQYVISEVKAQGFAKPTPIQSQGWPMALSGRDVVGIAETGSGK 175
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_ASPFU (ATP-dependent RNA helicase dbp2 OS=Aspergillus fumigatus GN=dbp2 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13 Identity = 34/76 (44.74%), Postives = 54/76 (71.05%), Query Frame = 2 Query: 482 SKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR 709 S++ + RK+ + V G ++P P++NF + FP+ +L ++KA+G +PT IQ QG P+ LSGRD++GIA TGSG+ Sbjct: 96 SEREVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGK 171
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_ASPNC (ATP-dependent RNA helicase dbp2 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 35/86 (40.70%), Postives = 56/86 (65.12%), Query Frame = 2 Query: 452 WKPPLPIRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR 709 +K + S++ D RK+ + V G ++P P++ F + FP+ +L ++KA+G +PT IQ QG P+ LSGRD++GIA TGSG+ Sbjct: 102 YKEHADVAERSQRDVDEFRKKHEMAVQGRNVPRPVETFDEAGFPQYVLSEVKAQGFDRPTAIQSQGWPMALSGRDVVGIAETGSGK 187
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_SCLS1 (ATP-dependent RNA helicase dbp2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp2 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 34/68 (50.00%), Postives = 48/68 (70.59%), Query Frame = 2 Query: 506 RKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR 709 R Q +I V G +IP P++ F + FP ++ ++KA+G PTPIQ QG P+ LSGRD++GIA TGSG+ Sbjct: 132 RAQHNIAVQGPNIPKPVETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGK 199
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_MAGGR (ATP-dependent RNA helicase DBP2 OS=Magnaporthe grisea GN=DBP2 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 33/80 (41.25%), Postives = 51/80 (63.75%), Query Frame = 2 Query: 470 IRRMSKKACDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR 709 + S+ D R++ + V G D+P P++ F + FP ++ ++KA+G PT IQ QG P+ LSGRD++GIA TGSG+ Sbjct: 96 VTNRSQAEVDKFRREHSMAVQGSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGK 175
BLAST of FC930567 vs. ExPASy Swiss-Prot
Match: DBP2_BOTFB (ATP-dependent RNA helicase dbp2 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp2 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13 Identity = 34/68 (50.00%), Postives = 48/68 (70.59%), Query Frame = 2 Query: 506 RKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGR 709 R Q +I V G +IP P++ F + FP ++ ++KA+G PTPIQ QG P+ LSGRD++GIA TGSG+ Sbjct: 85 RAQHNIAVQGPNIPKPVETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGK 152 The following BLAST results are available for this feature:
BLAST of FC930567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930567 ID=FC930567; Name=FC930567; organism=Citrus clementina; type=EST; length=744bpback to top |