FC930780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930780 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.340e-26 Identity = 76/227 (33.48%), Postives = 119/227 (52.42%), Query Frame = 2 Query: 20 SKTIS*KMASHLGICTPCASEIITGFPSYRSPPLLRNRDFCGRIKAVADNRGSLDHLQRSSLN------QSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKNSAEVKDGVLYITI 682 S +S K S + PC + FP R P L R+ + DN+ + + R + + + +P++ + +S G+ D + R+++QM++TM+RI ED +T P + G R PW I++ E++ ++R D+PG+S+ DVKV VE+ +LVIK++ + N E+ W Y Y TR+ LPDN E EK AE+KDGVLYITI Sbjct: 12 SPILSQKPGSSVKSTPPC----MASFPLRRQLPRLGLRNVRAQAGGDGDNKDNSVEVHRVNKDDQGTAVERKPRRSSIDISPFGLLDPWSPMRSMRQMLDTMDRIFED----AITIPGRN----IGGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGG---------EDCWSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITI 217
BLAST of FC930780 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.719e-26 Identity = 74/217 (34.10%), Postives = 114/217 (52.53%), Query Frame = 2 Query: 59 ICTPCASEIITGFPSYRSPPLLRNRDFCGRIKAVADNRGSLDHLQR--------SSLNQSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWP-SQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKNSAEVKDGVLYITI 682 +C+P A S + R RI+A S+D +Q+ SS+ + ++ VS G+ D RT++QM++TM+R+ ED T P S + R SG R PW I+E E++ K+R D+PG+S+ DVK+ VE+++LVIK E+ + + ++ W SY TR+ LPDN E +K AE+K+GVL+ITI Sbjct: 12 LCSPLAPSPSVSSKSATPFSVSFPRKIPSRIRAQDQRENSIDVVQQGQQKGNQGSSVEKRPQQRLTMDVSPFGLLDPLSPMRTMRQMLDTMDRMFED------TMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKE----------DSDDSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITI 212
BLAST of FC930780 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.658e-25 Identity = 70/186 (37.63%), Postives = 104/186 (55.91%), Query Frame = 2 Query: 152 KAVADNRGSLDHLQRSSLN---------QSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKNSAEVKDGVLYITI 682 +A DN+ + + SS + +P + A VS G+ D RT++QM++TM+R+ ED +T+P + SG RTPW I + EN+ K+R D+PG+S+ DVKV VE MLVIK E + + ++ W N Y SY TR++LPDNV +K AE+K+GVL+I+I Sbjct: 49 RATGDNKDTSVDVHHSSAQGGNNQGTAVERRPTRMALDVSPFGVLDPMSPMRTMRQMIDTMDRLFEDT----MTFPGRNRA--SGTGEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDG-------RDKHSWGRN-YSSYDTRLSLPDNVVKDKIKAELKNGVLFISI 220
BLAST of FC930780 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.165e-25 Identity = 71/185 (38.38%), Postives = 110/185 (59.46%), Query Frame = 2 Query: 128 NRDFCGRIKAVADNRGSLDHLQRSSLNQSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKNSAEVKDGVLYITI 682 N+D + +N+G + + S + +P++ A VS G+ D RT++QMM+TM+R+ ED +T+P + R G R PW I++ EN+ K+R D+PG+S+ +VKV VE+ +LVIK E ++ E+ D S W N Y SY TR++LPDNV+ +K AE+K+GVL I+I Sbjct: 61 NKDTSVDVHVSNNNQGGNN---QGSAVERRPRRMALDVSPFGLLDPMSPMRTMRQMMDTMDRLFEDT----MTFPGSRNR---GTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEH-KKEESGKDDS-------WGRN-YSSYDTRLSLPDNVDKDKVKAELKNGVLLISI 226
BLAST of FC930780 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25 Identity = 65/176 (36.93%), Postives = 100/176 (56.82%), Query Frame = 2 Query: 164 DNRGSLDHLQRSSLN---QSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKNSAEVKDGVLYITI 682 DN + H+ + + +P++ A +S GI D + R+++Q+++TM+R+ ED +T+P + G R PW I++ E++ ++R D+PG+++ DVKV VE+ MLVIK E D S W S Y SY TR+ LPDN E +K AE+K+GVLYITI Sbjct: 6 DNSVEVQHVSKGDQGTAVEKKPRRTAMDISPFGILDPWSPMRSMRQILDTMDRVFEDT----MTFPGRN----IGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDS-------WSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITI 166
BLAST of FC930780 vs. ExPASy Swiss-Prot
Match: HS21C_WHEAT (Small heat shock protein, chloroplastic OS=Triticum aestivum GN=HSP21 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.672e-20 Identity = 59/175 (33.71%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 161 ADNRGSLDHLQRSSLNQSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAE-KAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKNSAEVKDGVLYITI 682 A N G+ Q+ + Q +P++ +S G+ D RT++QM++TM+R+ +D V +P++ R + R R PW I E E + K+R D+PG+SR +V+V VE+ LVI+ E K + E +G + W SY R+ALPD + + AE+K+GVL +++ Sbjct: 63 AQNAGN----QQGNAVQRRPRRAGFDISPFGLVDPMSPMRTMRQMLDTMDRLFDD----AVGFPTR--RSPAARARRRMPWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVIRGEHKKEAGEGQGEGG----DGWWKERSVSSYDMRLALPDECDKSQVRAELKNGVLLVSV 223
BLAST of FC930780 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.746e-19 Identity = 56/167 (33.53%), Postives = 94/167 (56.29%), Query Frame = 2 Query: 191 QRSSLNQSQPKKRAA--PVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQER-VRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKNSAEVKDGVLYITI 682 Q+ + Q +P++ +A +S G+ D RT++QM++TM+RI +D + +P+ R + +G R PW + E + + ++R D+PG+SR +VKV VE+ LVI+ E + +GS + W SY R+ALPD + K AE+K+GVL +T+ Sbjct: 67 QQGNAVQRRPRRSSALDGISPFGLVDPMSPMRTMRQMLDTMDRIFDD---VALGFPATPRRSLATG--EVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGS---GDGWWKERSVSSYDMRLALPDECDKSKVRAELKNGVLLVTV 225
BLAST of FC930780 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.246e-14 Identity = 53/164 (32.32%), Postives = 86/164 (52.44%), Query Frame = 2 Query: 221 KKRAAPVSSPG---------IWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNV-EFEKNSAEVKDGVLYITI 682 + AP+S G ++D F A R+V Q+M M+++ME+PF R R R W +RE E ++++D+PG+++ DVKV VE++ L+IK+E + E EEE+ YS+RI L N+ + + AE+K+GVL +T+ Sbjct: 47 RSNRAPISRRGDFPASFFSDVFDPFRATRSVGQLMNLMDQLMENPF---------MAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETE--------EEEQR------RRYSSRIELTPNLYKIDGIKAEMKNGVLKVTV 187
BLAST of FC930780 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.534e-14 Identity = 51/159 (32.08%), Postives = 87/159 (54.72%), Query Frame = 2 Query: 209 QSQPKKRAAPVSSPGIWDSFPAARTVQQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNV-EFEKNSAEVKDGVLYITI 682 +S P++R S ++D F R+V Q++ M++ ME+P + + SG RRG W I+E ++ +R+D+PG+SR DVK+ +E+ LVI+ E G E+ E +G +++RI LPD + + ++ AE+K+GVL + I Sbjct: 55 RSVPRRRGDFFSD--VFDPFSPTRSVSQVLNLMDQFMENPLL-----SATRGMGASGARRG---WDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGE----------GKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVI 193
BLAST of FC930780 vs. ExPASy Swiss-Prot
Match: HS26M_ARATH (26.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP26.5 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.456e-13 Identity = 35/92 (38.04%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 407 IRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKNSAEVKDGVLYITI 682 ++E ++ YK+R +VPG+++ DVK+ V + +L IK + ++A + + EE+E W S YG Y+T ++LPD+ + E AE+K+GVL + I Sbjct: 129 VKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGD----HKAEEEKGSPEEDEYWSSKSYGYYNTSLSLPDDAKVEDIKAELKNGVLNLVI 216 The following BLAST results are available for this feature:
BLAST of FC930780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930780 ID=FC930780; Name=FC930780; organism=Citrus clementina; type=EST; length=723bpback to top |