FC930799
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930799 vs. ExPASy Swiss-Prot
Match: CSN3_ARATH (COP9 signalosome complex subunit 3 OS=Arabidopsis thaliana GN=CSN3 PE=1 SV=2) HSP 1 Score: 285.804 bits (730), Expect = 1.643e-76 Identity = 145/230 (63.04%), Postives = 177/230 (76.96%), Query Frame = 1 Query: 1 TALKDYLKAGEDLLRSESTRLLSFLDQLDPSKHSLGYLYFLEPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGVGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINLPRDFFLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKYTSSAAQRNLKN 690 +AL D L+ +D LR+E S LDQLD SKHSLGYLYFLE ++KE+A +PIIARFI SC A QIR KF+++CK KD V+ L P+RGVGP+L A++K+Q S++ LT LHP+ LQLCL AK YK+G S+L DDI EI+ PRDFFLY YYGGMI IG KRF+KALELL+NVVTAPM +NAIA+EAYKKYILVSLIH+GQF++TLPK S+AAQR+ KN Sbjct: 26 SALHDLLRGAQDSLRAEPGVNFSTLDQLDASKHSLGYLYFLEVLTCGPVSKEKAAYEIPIIARFINSCDAGQIRLASYKFVSLCKILKDHVIALGDPLRGVGPLLNAVQKLQVSSKRLTALHPDVLQLCLQAKSYKSGFSILSDDIVEIDQPRDFFLYSYYGGMICIGLKRFQKALELLYNVVTAPMHQVNAIALEAYKKYILVSLIHNGQFTNTLPKCASTAAQRSFKN 255
BLAST of FC930799 vs. ExPASy Swiss-Prot
Match: CSN3_DANRE (COP9 signalosome complex subunit 3 OS=Danio rerio GN=cops3 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.118e-35 Identity = 88/237 (37.13%), Postives = 128/237 (54.01%), Query Frame = 1 Query: 1 TALKDYLKAGEDLLRSESTRLLSFLDQLDPSKHSLGYLYFLEPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGVGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINL------PRDFFLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKYTSSAAQRNLKNL 693 T L + + +LL + L + L LD +HSLG L L + TL + FI++C+ E IRY + F +C + + ++ + P+RG+ + AI K+Q +T LT++H + QLCLLAKC+K + LE D+ +I + F Y YYGGMI+ G K F +AL +T P +++ I +EAYKKYILVSLI HG+ LPKYTS R +K L Sbjct: 22 TQLCELINKSGELLAKNLSHLDTVLGALDIQEHSLGVLAVLF-VKFSMPNIPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGISILKQAIDKMQMNTNQLTSVHADLCQLCLLAKCFKPAVPFLELDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFFEQAITTPAMAVSHIMLEAYKKYILVSLILHGKVQQ-LPKYTSQIVGRFIKPL 256
BLAST of FC930799 vs. ExPASy Swiss-Prot
Match: CSN3_PONAB (COP9 signalosome complex subunit 3 OS=Pongo abelii GN=COPS3 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.653e-34 Identity = 87/237 (36.71%), Postives = 129/237 (54.43%), Query Frame = 1 Query: 1 TALKDYLKAGEDLLRSESTRLLSFLDQLDPSKHSLGYLYFLEPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGVGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINL------PRDFFLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKYTSSAAQRNLKNL 693 T L + + +LL + L + L LD +HSLG L L + + TL + FI++C+ E IRY + F +C + + ++ + P+RG+G + AI K+Q +T LT++H + QLCLLAKC+K L L+ D+ +I + F Y YYGGMI+ G K F +AL +T P +++ I +E+YKKYILVSLI G+ LPKYTS R +K L Sbjct: 22 TQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF-VKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQ-LPKYTSQIVGRFIKPL 256
BLAST of FC930799 vs. ExPASy Swiss-Prot
Match: CSN3_MACFA (COP9 signalosome complex subunit 3 OS=Macaca fascicularis GN=COPS3 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.653e-34 Identity = 87/237 (36.71%), Postives = 129/237 (54.43%), Query Frame = 1 Query: 1 TALKDYLKAGEDLLRSESTRLLSFLDQLDPSKHSLGYLYFLEPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGVGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINL------PRDFFLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKYTSSAAQRNLKNL 693 T L + + +LL + L + L LD +HSLG L L + + TL + FI++C+ E IRY + F +C + + ++ + P+RG+G + AI K+Q +T LT++H + QLCLLAKC+K L L+ D+ +I + F Y YYGGMI+ G K F +AL +T P +++ I +E+YKKYILVSLI G+ LPKYTS R +K L Sbjct: 22 TQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF-VKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQ-LPKYTSQIVGRFIKPL 256
BLAST of FC930799 vs. ExPASy Swiss-Prot
Match: CSN3_HUMAN (COP9 signalosome complex subunit 3 OS=Homo sapiens GN=COPS3 PE=1 SV=3) HSP 1 Score: 145.591 bits (366), Expect = 2.653e-34 Identity = 87/237 (36.71%), Postives = 129/237 (54.43%), Query Frame = 1 Query: 1 TALKDYLKAGEDLLRSESTRLLSFLDQLDPSKHSLGYLYFLEPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGVGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINL------PRDFFLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKYTSSAAQRNLKNL 693 T L + + +LL + L + L LD +HSLG L L + + TL + FI++C+ E IRY + F +C + + ++ + P+RG+G + AI K+Q +T LT++H + QLCLLAKC+K L L+ D+ +I + F Y YYGGMI+ G K F +AL +T P +++ I +E+YKKYILVSLI G+ LPKYTS R +K L Sbjct: 22 TQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF-VKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQ-LPKYTSQIVGRFIKPL 256
BLAST of FC930799 vs. ExPASy Swiss-Prot
Match: CSN3_RAT (COP9 signalosome complex subunit 3 OS=Rattus norvegicus GN=Cops3 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.465e-34 Identity = 87/237 (36.71%), Postives = 129/237 (54.43%), Query Frame = 1 Query: 1 TALKDYLKAGEDLLRSESTRLLSFLDQLDPSKHSLGYLYFLEPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGVGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINL------PRDFFLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKYTSSAAQRNLKNL 693 T L + + +LL + L + L LD +HSLG L L + + TL + FI++C+ E IRY + F +C + + ++ + P+RG+G + AI K+Q +T LT++H + QLCLLAKC+K L L+ D+ +I + F Y YYGGMI+ G K F +AL +T P +++ I +E+YKKYILVSLI G+ LPKYTS R +K L Sbjct: 22 TQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF-VKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNTNQLTSVHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQ-LPKYTSQIVGRFIKPL 256
BLAST of FC930799 vs. ExPASy Swiss-Prot
Match: CSN3_MOUSE (COP9 signalosome complex subunit 3 OS=Mus musculus GN=Cops3 PE=1 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 3.465e-34 Identity = 87/237 (36.71%), Postives = 129/237 (54.43%), Query Frame = 1 Query: 1 TALKDYLKAGEDLLRSESTRLLSFLDQLDPSKHSLGYLYFLEPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGVGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINL------PRDFFLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKYTSSAAQRNLKNL 693 T L + + +LL + L + L LD +HSLG L L + + TL + FI++C+ E IRY + F +C + + ++ + P+RG+G + AI K+Q +T LT++H + QLCLLAKC+K L L+ D+ +I + F Y YYGGMI+ G K F +AL +T P +++ I +E+YKKYILVSLI G+ LPKYTS R +K L Sbjct: 22 TQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF-VKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNTNQLTSVHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQ-LPKYTSQIVGRFIKPL 256
BLAST of FC930799 vs. ExPASy Swiss-Prot
Match: CSN3_BOVIN (COP9 signalosome complex subunit 3 OS=Bos taurus GN=COPS3 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.465e-34 Identity = 86/237 (36.29%), Postives = 129/237 (54.43%), Query Frame = 1 Query: 1 TALKDYLKAGEDLLRSESTRLLSFLDQLDPSKHSLGYLYFLEPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGVGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINL------PRDFFLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKYTSSAAQRNLKNL 693 T L + + +LL + L + L LD +HSLG L L + + TL + FI++C+ E IRY + F +C + + ++ + P+RG+G + AI K+Q +T LT++H + QLCLLAKC+K L L+ D+ +I + F Y YYGGM++ G K F +AL +T P +++ I +E+YKKYILVSLI G+ LPKYTS R +K L Sbjct: 22 TQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF-VKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGVLRQAIDKMQMNTNQLTSVHADLCQLCLLAKCFKPALPYLDVDMVDICKENGAYDAKHFLCYYYYGGMVYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQ-LPKYTSQIVGRFIKPL 256
BLAST of FC930799 vs. ExPASy Swiss-Prot
Match: CSN3_CHICK (COP9 signalosome complex subunit 3 OS=Gallus gallus GN=COPS3 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.720e-33 Identity = 86/237 (36.29%), Postives = 128/237 (54.01%), Query Frame = 1 Query: 1 TALKDYLKAGEDLLRSESTRLLSFLDQLDPSKHSLGYLYFLEPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGVGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINL------PRDFFLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKYTSSAAQRNLKNL 693 T L + + +LL + L + L LD +HSLG L L + + TL + FI++C+ E IRY + F +C + + ++ + P+RG+ + AI K+Q +T LT++H + QLCLLAKC+K L L+ D+ +I + F Y YYGGMI+ G K F +AL +T P +++ I +E+YKKYILVSLI G+ LPKYTS R +K L Sbjct: 22 TQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF-VKFSMPSIPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGISILRQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQ-LPKYTSQIVGRFIKPL 256
BLAST of FC930799 vs. ExPASy Swiss-Prot
Match: CSN3_XENTR (COP9 signalosome complex subunit 3 OS=Xenopus tropicalis GN=cops3 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.246e-33 Identity = 86/237 (36.29%), Postives = 128/237 (54.01%), Query Frame = 1 Query: 1 TALKDYLKAGEDLLRSESTRLLSFLDQLDPSKHSLGYLYFLEPCMYCSITKERANTLVPIIARFITSCSAEQIRYVPEKFINVCKRYKDQVLLLEAPIRGVGPMLTAIRKIQSSTEHLTTLHPEFLQLCLLAKCYKAGLSVLEDDIYEINL------PRDFFLYCYYGGMIFIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILVSLIHHGQFSSTLPKYTSSAAQRNLKNL 693 T L + + +LL + L + L LD +HSLG L L + + TL + FI++C+ E IRY + F +C + + ++ + P+RG+ + AI K+Q + LT++H + QL LLAKC+K L+ L+ D+ +I + F Y YYGGMI+ G K F +AL +T P +++ I +EAYKKYILVSLI HG+ LPKYTS R +K L Sbjct: 22 TQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLF-VKFSMPSIPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGICVLRQAIDKMQMNANQLTSIHADLCQLSLLAKCFKPALAYLDVDMMDICKENGAYDAKPFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLEAYKKYILVSLILHGKVQQ-LPKYTSQIVGRFIKPL 256 The following BLAST results are available for this feature:
BLAST of FC930799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930799 ID=FC930799; Name=FC930799; organism=Citrus clementina; type=EST; length=736bpback to top |