FC930915
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHG_CITLA (Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 6.655e-42 Identity = 91/159 (57.23%), Postives = 108/159 (67.92%), Query Frame = 1 Query: 46 IISLPASLKSKPATKMRSSVLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 I + A L + SS LR AK GA G+ KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+ N PGV AD+ H++T + V G++G QL AL D++I+PAGVPRKPGMTRDDLF INAGIVK LC IAK CP AIVN+I Sbjct: 11 IARISAHLHPPKSQMEESSALRRANCRAK-GGAPGF--------KVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLI 160
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM_BOVIN (Malate dehydrogenase, mitochondrial OS=Bos taurus GN=MDH2 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.135e-41 Identity = 86/139 (61.87%), Postives = 109/139 (78.42%), Query Frame = 1 Query: 115 VKTLAKPAGA---RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 + LA+PAGA R +S+ + + KVAVLGA+GGIGQPL+LL+K +PLVSRL LYDIA+TPGVAAD+ HI TR+ V GY+G +QL L+ DVV+IPAGVPRKPGMTRDDLFN NA IV L +A A++CP A++ +I Sbjct: 2 LSALARPAGAALRRSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICII 140
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM_PIG (Malate dehydrogenase, mitochondrial OS=Sus scrofa GN=MDH2 PE=1 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 1.483e-41 Identity = 86/139 (61.87%), Postives = 109/139 (78.42%), Query Frame = 1 Query: 115 VKTLAKPAGA---RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 + LA+PAGA R +S+ + KVAVLGA+GGIGQPL+LL+K +PLVSRL LYDIA+TPGVAAD+ HI TR+ V GY+G +QL L+ DVV+IPAGVPRKPGMTRDDLFN NA IV L +A A++CP+A++ +I Sbjct: 2 LSALARPAGAALRRSFSTSXQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII 140
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHG2_ARATH (Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.483e-41 Identity = 83/118 (70.34%), Postives = 97/118 (82.20%), Query Frame = 1 Query: 169 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 P KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+AN PGV AD+ H++T + V G++G QL +AL D+VIIPAGVPRKPGMTRDDLFNINAGIV+ L AIAK CP AIVN+I Sbjct: 41 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVANAPGVTADISHMDTSAVVRGFLGQPQLEEALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLSEAIAKCCPKAIVNII 158
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM_RAT (Malate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Mdh2 PE=1 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 2.529e-41 Identity = 85/139 (61.15%), Postives = 108/139 (77.70%), Query Frame = 1 Query: 115 VKTLAKPAGA---RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 + LA+P GA R +S+ + + KVAVLGA+GGIGQPL+LL+K +PLVSRL LYDIA+TPGVAAD+ HI TR+ V GY+G +QL L+ DVV+IPAGVPRKPGMTRDDLFN NA IV L +A A++CP A++ +I Sbjct: 2 LSALARPVGAALRRSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRANVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICII 140
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM_PONAB (Malate dehydrogenase, mitochondrial OS=Pongo abelii GN=MDH2 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 5.634e-41 Identity = 85/139 (61.15%), Postives = 108/139 (77.70%), Query Frame = 1 Query: 115 VKTLAKPAGA---RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 + LA+PA A R +S+ + + KVAVLGA+GGIGQPL+LL+K +PLVSRL LYDIA+TPGVAAD+ HI T++ V GY+G +QL L+ DVV+IPAGVPRKPGMTRDDLFN NA IV L SA A++CP A++ +I Sbjct: 2 LSALARPASAVLRRSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTSACAQHCPEAMICVI 140
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHP_ARATH (Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At3g47520 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 7.358e-41 Identity = 95/174 (54.60%), Postives = 118/174 (67.82%), Query Frame = 1 Query: 1 VFFNLSPFSFNGLFIIISLPASLKSKPATKMRSSVLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 V FN P SF GL + S S A +R SV ++ + KP G + +S KVAVLGAAGGIGQPL+LL+K++PLVS L LYDIAN GVAAD+ H NT S+V + G +L L+D +VV+IPAGVPRKPGMTRDDLFNINA IVK L A+A+ CPNA +++I Sbjct: 31 VKFNSVP-SFTGLKSTSLISGSDSSSLAKTLRGSVTKAQTSDKKPYGFKINASY-----KVAVLGAAGGIGQPLSLLIKMSPLVSTLHLYDIANVKGVAADLSHCNTPSQVRDFTGPSELADCLKDVNVVVIPAGVPRKPGMTRDDLFNINANIVKTLVEAVAENCPNAFIHII 198
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 9.610e-41 Identity = 82/118 (69.49%), Postives = 94/118 (79.66%), Query Frame = 1 Query: 169 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 P KVA+LGAAGGIGQ L+LLMK+NPLVS L LYD+ N PGV ADV H++T + V G++G QL AL D+VIIPAGVPRKPGMTRDDLF INAGIVK LC +AK CPNAIVN+I Sbjct: 45 PGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLI 162
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM_HUMAN (Malate dehydrogenase, mitochondrial OS=Homo sapiens GN=MDH2 PE=1 SV=3) HSP 1 Score: 165.622 bits (418), Expect = 1.255e-40 Identity = 84/139 (60.43%), Postives = 108/139 (77.70%), Query Frame = 1 Query: 115 VKTLAKPAGA---RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 + LA+PA A R +S+ + + KVAVLGA+GGIGQPL+LL+K +PLVSRL LYDIA+TPGVAAD+ HI T++ V GY+G +QL L+ DVV+IPAGVPRKPGMTRDDLFN NA IV L +A A++CP A++ +I Sbjct: 2 LSALARPASAALRRSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVI 140
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM_CHLRE (Malate dehydrogenase, mitochondrial OS=Chlamydomonas reinhardtii PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.255e-40 Identity = 89/147 (60.54%), Postives = 112/147 (76.19%), Query Frame = 1 Query: 91 MRSSVLRSVKTLAKPAGARGYSS---ESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 M SS ++ A A ARG+++ S RKVAVLGAAGGIGQPL++LMK+N VS L+LYDIA TPGVAADV HINT+++V G+ D L +AL D+VIIPAGVPRKPGMTRDDLF INAGIV+DL +A+ ++CP A++N+I Sbjct: 33 MASSTSSAMAKWAAQA-ARGFAAAAPSSGKGRKVAVLGAAGGIGQPLSMLMKMNSQVSSLSLYDIAGTPGVAADVSHINTKAQVKGF-DKDGLAEALRGCDLVIIPAGVPRKPGMTRDDLFKINAGIVRDLVTAVGQHCPGAVLNII 177 The following BLAST results are available for this feature:
BLAST of FC930915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930915 ID=FC930915; Name=FC930915; organism=Citrus clementina; type=EST; length=524bpback to top |